RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 TOX2Q96NM4 488 aa11.15□□□□□ -0.62
SNX17-207ENST00000489402 SEMA6BQ9H3T3 888 aa11.15□□□□□ -0.62
SNX17-207ENST00000489402 DCTPP1Q9H773 170 aa11.15□□□□□ -0.62
SNX17-207ENST00000489402 RAVER2Q9HCJ3 691 aaKnown RBP11.15□□□□□ -0.62
SNX17-207ENST00000489402 INCENPQ9NQS7 918 aa11.15□□□□□ -0.62
SNX17-207ENST00000489402 MTMR4Q9NYA4 1195 aa11.15□□□□□ -0.62
SNX17-207ENST00000489402 DDX49Q9Y6V7 483 aaKnown RBP11.15□□□□□ -0.62
SNX17-207ENST00000489402 CHD9Q3L8U1 2897 aa11.15□□□□□ -0.62
SNX17-207ENST00000489402 TTC41PQ6P2S7 1318 aa11.14□□□□□ -0.63
SNX17-207ENST00000489402 TMEM265A0A087WTH1 108 aa11.14□□□□□ -0.63
SNX17-207ENST00000489402 PATL2C9JE40 543 aaKnown RBP11.14□□□□□ -0.63
SNX17-207ENST00000489402 DUSP11O75319 330 aaKnown RBP11.14□□□□□ -0.63
SNX17-207ENST00000489402 C6orf222P0C671 652 aaPredicted RBP11.14□□□□□ -0.63
SNX17-207ENST00000489402 FDX1P10109 184 aa11.14□□□□□ -0.63
SNX17-207ENST00000489402 CST5P28325 142 aaPredicted RBP11.14□□□□□ -0.63
SNX17-207ENST00000489402 IKQ13123 557 aaPredicted RBP11.14□□□□□ -0.63
SNX17-207ENST00000489402 ACVR2BQ13705 512 aa11.14□□□□□ -0.63
SNX17-207ENST00000489402 KCNA10Q16322 511 aa11.14□□□□□ -0.63
SNX17-207ENST00000489402 PPP4R3BQ5MIZ7 849 aa11.14□□□□□ -0.63
SNX17-207ENST00000489402 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.14□□□□□ -0.63
SNX17-207ENST00000489402 RASGRP2Q7LDG7 609 aa11.14□□□□□ -0.63
SNX17-207ENST00000489402 IFNL3Q8IZI9 196 aa11.14□□□□□ -0.63
SNX17-207ENST00000489402 LRRC47Q8N1G4 583 aaKnown RBP11.14□□□□□ -0.63
SNX17-207ENST00000489402 GMCL1P1Q8NEA9 526 aa11.14□□□□□ -0.63
SNX17-207ENST00000489402 KLHDC9Q8NEP7 349 aa11.14□□□□□ -0.63
SNX17-207ENST00000489402 MAFAQ8NHW3 353 aaPredicted RBP11.14□□□□□ -0.63
SNX17-207ENST00000489402 MKL1Q969V6 931 aa11.14□□□□□ -0.63
SNX17-207ENST00000489402 VTI1AQ96AJ9 217 aa11.14□□□□□ -0.63
SNX17-207ENST00000489402 NAPBQ9H115 298 aa11.14□□□□□ -0.63
SNX17-207ENST00000489402 ABHD16BQ9H3Z7 469 aa11.14□□□□□ -0.63
SNX17-207ENST00000489402 SLC38A10Q9HBR0 1119 aa11.14□□□□□ -0.63
SNX17-207ENST00000489402 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.14□□□□□ -0.63
SNX17-207ENST00000489402 PLIN4Q96Q06 1357 aa11.14□□□□□ -0.63
SNX17-207ENST00000489402 MCM3APO60318 1980 aa11.14□□□□□ -0.63
SNX17-207ENST00000489402 ELP1O95163 1332 aa11.13□□□□□ -0.63
SNX17-207ENST00000489402 MYADML2A6NDP7 307 aa11.13□□□□□ -0.63
SNX17-207ENST00000489402 BMP3P12645 472 aa11.13□□□□□ -0.63
SNX17-207ENST00000489402 STAT2P52630 851 aa11.13□□□□□ -0.63
SNX17-207ENST00000489402 FAAP100Q0VG06 881 aa11.13□□□□□ -0.63
SNX17-207ENST00000489402 CCDC144BQ3MJ40 725 aa11.13□□□□□ -0.63
SNX17-207ENST00000489402 SLFN13Q68D06 897 aa11.13□□□□□ -0.63
SNX17-207ENST00000489402 CCDC174Q6PII3 467 aa11.13□□□□□ -0.63
SNX17-207ENST00000489402 ARMCX2Q7L311 632 aa11.13□□□□□ -0.63
SNX17-207ENST00000489402 FAM160B2Q86V87 743 aa11.13□□□□□ -0.63
SNX17-207ENST00000489402 NEDD1Q8NHV4 660 aa11.13□□□□□ -0.63
SNX17-207ENST00000489402 MYLIPQ8WY64 445 aa11.13□□□□□ -0.63
SNX17-207ENST00000489402 FGD4Q96M96 766 aa11.13□□□□□ -0.63
SNX17-207ENST00000489402 FSD1Q9BTV5 496 aa11.13□□□□□ -0.63
SNX17-207ENST00000489402 COL25A1Q9BXS0 654 aaPredicted RBP11.13□□□□□ -0.63
SNX17-207ENST00000489402 HOMER2Q9NSB8 354 aa11.13□□□□□ -0.63
SNX17-207ENST00000489402 PCDHB15Q9Y5E8 787 aa11.13□□□□□ -0.63
SNX17-207ENST00000489402 A0A0U1RQG5 324 aaPredicted RBP11.12□□□□□ -0.63
SNX17-207ENST00000489402 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.12□□□□□ -0.63
SNX17-207ENST00000489402 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.12□□□□□ -0.63
SNX17-207ENST00000489402 TMEM232C9JQI7 657 aa11.12□□□□□ -0.63
SNX17-207ENST00000489402 FOXP2O15409 715 aa11.12□□□□□ -0.63
SNX17-207ENST00000489402 TLR3O15455 904 aaKnown RBP11.12□□□□□ -0.63
SNX17-207ENST00000489402 TIMP1P01033 207 aa11.12□□□□□ -0.63
SNX17-207ENST00000489402 ASGR1P07306 291 aa11.12□□□□□ -0.63
SNX17-207ENST00000489402 FOSL2P15408 326 aa11.12□□□□□ -0.63
SNX17-207ENST00000489402 SLC1A4P43007 532 aa11.12□□□□□ -0.63
SNX17-207ENST00000489402 GJA9P57773 515 aa11.12□□□□□ -0.63
SNX17-207ENST00000489402 TFAP4Q01664 338 aa11.12□□□□□ -0.63
SNX17-207ENST00000489402 PPARAQ07869 468 aa11.12□□□□□ -0.63
SNX17-207ENST00000489402 GNASQ5JWF2 1037 aa11.12□□□□□ -0.63
SNX17-207ENST00000489402 CCSAPQ6IQ19 270 aaPredicted RBP11.12□□□□□ -0.63
SNX17-207ENST00000489402 CHURC1Q8WUH1 139 aa11.12□□□□□ -0.63
SNX17-207ENST00000489402 UPF3AQ9H1J1 476 aaKnown RBP11.12□□□□□ -0.63
SNX17-207ENST00000489402 TTYH1Q9H313 450 aaPredicted RBP11.12□□□□□ -0.63
SNX17-207ENST00000489402 ACAD9Q9H845 621 aa11.12□□□□□ -0.63
SNX17-207ENST00000489402 SNAP25P60880 206 aa11.11□□□□□ -0.63
SNX17-207ENST00000489402 PPIGQ13427 754 aaKnown RBP eCLIP11.11□□□□□ -0.63
SNX17-207ENST00000489402 TKFCQ3LXA3 575 aa11.11□□□□□ -0.63
SNX17-207ENST00000489402 TMEM63BQ5T3F8 832 aa11.11□□□□□ -0.63
SNX17-207ENST00000489402 MFSD5Q6N075 450 aa11.11□□□□□ -0.63
SNX17-207ENST00000489402 CCDC129Q6ZRS4 1044 aa11.11□□□□□ -0.63
SNX17-207ENST00000489402 NOL8Q76FK4 1167 aaKnown RBP11.11□□□□□ -0.63
SNX17-207ENST00000489402 CCDC144CPQ8IYA2 1237 aa11.11□□□□□ -0.63
SNX17-207ENST00000489402 GMCL1Q96IK5 515 aa11.11□□□□□ -0.63
SNX17-207ENST00000489402 RNF146Q9NTX7 359 aa11.11□□□□□ -0.63
SNX17-207ENST00000489402 ZBTB47Q9UFB7 747 aaPredicted RBP11.11□□□□□ -0.63
SNX17-207ENST00000489402 TBX21Q9UL17 535 aa11.11□□□□□ -0.63
SNX17-207ENST00000489402 STX8Q9UNK0 236 aa11.11□□□□□ -0.63
SNX17-207ENST00000489402 ASB14A6NK59 587 aa11.1□□□□□ -0.63
SNX17-207ENST00000489402 TSPY2A6NKD2 308 aa11.1□□□□□ -0.63
SNX17-207ENST00000489402 ARVCFO00192 962 aa11.1□□□□□ -0.63
SNX17-207ENST00000489402 DNAJB2P25686 324 aa11.1□□□□□ -0.63
SNX17-207ENST00000489402 CDK7P50613 346 aa11.1□□□□□ -0.63
SNX17-207ENST00000489402 CNTN2Q02246 1040 aa11.1□□□□□ -0.63
SNX17-207ENST00000489402 TNFAIP2Q03169 654 aa11.1□□□□□ -0.63
SNX17-207ENST00000489402 ZMYM1Q5SVZ6 1142 aa11.1□□□□□ -0.63
SNX17-207ENST00000489402 TMEM199Q8N511 208 aa11.1□□□□□ -0.63
SNX17-207ENST00000489402 FAM133AQ8N9E0 248 aa11.1□□□□□ -0.63
SNX17-207ENST00000489402 PI4K2BQ8TCG2 481 aa11.1□□□□□ -0.63
SNX17-207ENST00000489402 STAG1Q8WVM7 1258 aa11.1□□□□□ -0.63
SNX17-207ENST00000489402 A1CFQ9NQ94 594 aaKnown RBP11.1□□□□□ -0.63
SNX17-207ENST00000489402 CHD7Q9P2D1 2997 aa11.09□□□□□ -0.63
SNX17-207ENST00000489402 NMT2O60551 498 aa11.09□□□□□ -0.63
SNX17-207ENST00000489402 PLA2G6O60733 806 aa11.09□□□□□ -0.63
SNX17-207ENST00000489402 CABYRO75952 493 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms