RNA–Protein interactions for RNA: ENST00000489313.1

PTP4A2-206, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 2

Gene PTP4A2, Length 1,551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-206ENST00000489313 FGD4Q96M96 766 aa12.93□□□□□ -0.34
PTP4A2-206ENST00000489313 STRBPQ96SI9 672 aaKnown RBP12.93□□□□□ -0.34
PTP4A2-206ENST00000489313 MKNK2Q9HBH9 465 aa12.93□□□□□ -0.34
PTP4A2-206ENST00000489313 NYAP2Q9P242 653 aa12.93□□□□□ -0.34
PTP4A2-206ENST00000489313 CTDP1Q9Y5B0 961 aaPredicted RBP12.93□□□□□ -0.34
PTP4A2-206ENST00000489313 GBF1Q92538 1859 aa12.93□□□□□ -0.34
PTP4A2-206ENST00000489313 ELP1O95163 1332 aa12.92□□□□□ -0.34
PTP4A2-206ENST00000489313 GSG1L2A8MUP6 293 aa12.92□□□□□ -0.34
PTP4A2-206ENST00000489313 SMARCA5O60264 1052 aaPredicted RBP12.92□□□□□ -0.34
PTP4A2-206ENST00000489313 ZBED4O75132 1171 aa12.92□□□□□ -0.34
PTP4A2-206ENST00000489313 ACRP10323 421 aa12.92□□□□□ -0.34
PTP4A2-206ENST00000489313 PPIGQ13427 754 aaKnown RBP eCLIP12.92□□□□□ -0.34
PTP4A2-206ENST00000489313 SBK1Q52WX2 424 aa12.92□□□□□ -0.34
PTP4A2-206ENST00000489313 TJAP1Q5JTD0 557 aa12.92□□□□□ -0.34
PTP4A2-206ENST00000489313 ZSCAN25Q6NSZ9 544 aa12.92□□□□□ -0.34
PTP4A2-206ENST00000489313 CCDC129Q6ZRS4 1044 aa12.92□□□□□ -0.34
PTP4A2-206ENST00000489313 ZNF467Q7Z7K2 595 aaPredicted RBP12.92□□□□□ -0.34
PTP4A2-206ENST00000489313 ANKRD35Q8N283 1001 aa12.92□□□□□ -0.34
PTP4A2-206ENST00000489313 PCSK9Q8NBP7 692 aaKnown RBP12.92□□□□□ -0.34
PTP4A2-206ENST00000489313 PBX4Q9BYU1 374 aa12.92□□□□□ -0.34
PTP4A2-206ENST00000489313 PPP1R12CQ9BZL4 782 aa12.92□□□□□ -0.34
PTP4A2-206ENST00000489313 ABHD16BQ9H3Z7 469 aa12.92□□□□□ -0.34
PTP4A2-206ENST00000489313 CLIP2Q9UDT6 1046 aa12.92□□□□□ -0.34
PTP4A2-206ENST00000489313 DDX19BQ9UMR2 479 aa12.92□□□□□ -0.34
PTP4A2-206ENST00000489313 MROH7Q68CQ1 1323 aa12.92□□□□□ -0.34
PTP4A2-206ENST00000489313 ATP2A1O14983 1001 aa12.91□□□□□ -0.34
PTP4A2-206ENST00000489313 MS4A1P11836 297 aa12.91□□□□□ -0.34
PTP4A2-206ENST00000489313 CST5P28325 142 aaPredicted RBP12.91□□□□□ -0.34
PTP4A2-206ENST00000489313 GJA9P57773 515 aa12.91□□□□□ -0.34
PTP4A2-206ENST00000489313 GNASQ5JWF2 1037 aa12.91□□□□□ -0.34
PTP4A2-206ENST00000489313 ARMCX2Q7L311 632 aa12.91□□□□□ -0.34
PTP4A2-206ENST00000489313 UPF3AQ9H1J1 476 aaKnown RBP12.91□□□□□ -0.34
PTP4A2-206ENST00000489313 PRDM12Q9H4Q4 367 aa12.91□□□□□ -0.34
PTP4A2-206ENST00000489313 SPC25Q9HBM1 224 aa12.91□□□□□ -0.34
PTP4A2-206ENST00000489313 SLC38A10Q9HBR0 1119 aa12.91□□□□□ -0.34
PTP4A2-206ENST00000489313 HOMER2Q9NSB8 354 aa12.91□□□□□ -0.34
PTP4A2-206ENST00000489313 A0A0U1RQG5 324 aaPredicted RBP12.9□□□□□ -0.34
PTP4A2-206ENST00000489313 ARVCFO00192 962 aa12.9□□□□□ -0.34
PTP4A2-206ENST00000489313 PRDM1O75626 825 aa12.9□□□□□ -0.34
PTP4A2-206ENST00000489313 CYP2C18P33260 490 aa12.9□□□□□ -0.34
PTP4A2-206ENST00000489313 RASIP1Q5U651 963 aa12.9□□□□□ -0.34
PTP4A2-206ENST00000489313 ZNF365Q70YC5 407 aa12.9□□□□□ -0.34
PTP4A2-206ENST00000489313 FAM126BQ8IXS8 530 aa12.9□□□□□ -0.34
PTP4A2-206ENST00000489313 CCDC144CPQ8IYA2 1237 aa12.9□□□□□ -0.34
PTP4A2-206ENST00000489313 IGKV6D-41A0A0C4DH26 115 aa12.9□□□□□ -0.35
PTP4A2-206ENST00000489313 CTAGE5O15320 804 aa12.9□□□□□ -0.35
PTP4A2-206ENST00000489313 BEX3Q00994 111 aa12.9□□□□□ -0.35
PTP4A2-206ENST00000489313 CNTN2Q02246 1040 aa12.9□□□□□ -0.35
PTP4A2-206ENST00000489313 CCDC174Q6PII3 467 aa12.9□□□□□ -0.35
PTP4A2-206ENST00000489313 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.9□□□□□ -0.35
PTP4A2-206ENST00000489313 LRRC47Q8N1G4 583 aaKnown RBP12.9□□□□□ -0.35
PTP4A2-206ENST00000489313 TMEM199Q8N511 208 aa12.9□□□□□ -0.35
PTP4A2-206ENST00000489313 OSBP2Q969R2 916 aa12.9□□□□□ -0.35
PTP4A2-206ENST00000489313 CHMP4CQ96CF2 233 aa12.9□□□□□ -0.35
PTP4A2-206ENST00000489313 CEP95Q96GE4 821 aa12.9□□□□□ -0.35
PTP4A2-206ENST00000489313 GAS2L1Q99501 681 aaPredicted RBP12.9□□□□□ -0.35
PTP4A2-206ENST00000489313 LRRCC1Q9C099 1032 aa12.9□□□□□ -0.35
PTP4A2-206ENST00000489313 KATNBL1Q9H079 304 aa12.9□□□□□ -0.35
PTP4A2-206ENST00000489313 EPB41L4AQ9HCS5 686 aaPredicted RBP12.9□□□□□ -0.35
PTP4A2-206ENST00000489313 FEM1BQ9UK73 627 aa12.9□□□□□ -0.35
PTP4A2-206ENST00000489313 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.89□□□□□ -0.35
PTP4A2-206ENST00000489313 TNFRSF10AO00220 468 aa12.89□□□□□ -0.35
PTP4A2-206ENST00000489313 TLR3O15455 904 aaKnown RBP12.89□□□□□ -0.35
PTP4A2-206ENST00000489313 GIMAP6Q6P9H5 292 aa12.89□□□□□ -0.35
PTP4A2-206ENST00000489313 PSRC1Q6PGN9 363 aaPredicted RBP12.89□□□□□ -0.35
PTP4A2-206ENST00000489313 NOL8Q76FK4 1167 aaKnown RBP12.89□□□□□ -0.35
PTP4A2-206ENST00000489313 CHST13Q8NET6 341 aa12.89□□□□□ -0.35
PTP4A2-206ENST00000489313 DCBLD2Q96PD2 775 aa12.89□□□□□ -0.35
PTP4A2-206ENST00000489313 MTMR4Q9NYA4 1195 aa12.89□□□□□ -0.35
PTP4A2-206ENST00000489313 CXXC1Q9P0U4 656 aaPredicted RBP12.89□□□□□ -0.35
PTP4A2-206ENST00000489313 FBXO40Q9UH90 709 aa12.89□□□□□ -0.35
PTP4A2-206ENST00000489313 ISY1Q9ULR0 285 aaKnown RBP12.89□□□□□ -0.35
PTP4A2-206ENST00000489313 DDX49Q9Y6V7 483 aaKnown RBP12.89□□□□□ -0.35
PTP4A2-206ENST00000489313 ASTN1O14525 1302 aa12.88□□□□□ -0.35
PTP4A2-206ENST00000489313 LRRC37A2A6NM11 1700 aa12.88□□□□□ -0.35
PTP4A2-206ENST00000489313 CD4P01730 458 aa12.88□□□□□ -0.35
PTP4A2-206ENST00000489313 PTGS1P23219 599 aa12.88□□□□□ -0.35
PTP4A2-206ENST00000489313 TDO2P48775 406 aa12.88□□□□□ -0.35
PTP4A2-206ENST00000489313 ADGRE1Q14246 886 aa12.88□□□□□ -0.35
PTP4A2-206ENST00000489313 CCDC85BQ15834 202 aaPredicted RBP12.88□□□□□ -0.35
PTP4A2-206ENST00000489313 TSHZ3Q63HK5 1081 aa12.88□□□□□ -0.35
PTP4A2-206ENST00000489313 CXCL17Q6UXB2 119 aa12.88□□□□□ -0.35
PTP4A2-206ENST00000489313 ZNF444Q8N0Y2 327 aaPredicted RBP12.88□□□□□ -0.35
PTP4A2-206ENST00000489313 KBTBD3Q8NAB2 608 aa12.88□□□□□ -0.35
PTP4A2-206ENST00000489313 MKL1Q969V6 931 aa12.88□□□□□ -0.35
PTP4A2-206ENST00000489313 IL23AQ9NPF7 189 aa12.88□□□□□ -0.35
PTP4A2-206ENST00000489313 ECHDC1Q9NTX5 307 aa12.88□□□□□ -0.35
PTP4A2-206ENST00000489313 UMODL1Q5DID0 1318 aa12.88□□□□□ -0.35
PTP4A2-206ENST00000489313 M0R2C6 588 aa12.87□□□□□ -0.35
PTP4A2-206ENST00000489313 GPAA1O43292 621 aa12.87□□□□□ -0.35
PTP4A2-206ENST00000489313 TTLL1O95922 423 aa12.87□□□□□ -0.35
PTP4A2-206ENST00000489313 APPP05067 770 aa12.87□□□□□ -0.35
PTP4A2-206ENST00000489313 BMP3P12645 472 aa12.87□□□□□ -0.35
PTP4A2-206ENST00000489313 OAZ1P54368 228 aa12.87□□□□□ -0.35
PTP4A2-206ENST00000489313 TNFAIP2Q03169 654 aa12.87□□□□□ -0.35
PTP4A2-206ENST00000489313 SLFN13Q68D06 897 aa12.87□□□□□ -0.35
PTP4A2-206ENST00000489313 FAM133AQ8N9E0 248 aa12.87□□□□□ -0.35
PTP4A2-206ENST00000489313 GMCL1P1Q8NEA9 526 aa12.87□□□□□ -0.35
PTP4A2-206ENST00000489313 APPBP2Q92624 585 aa12.87□□□□□ -0.35
PTP4A2-206ENST00000489313 MSRAQ9UJ68 235 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms