RNA–Protein interactions for RNA: ENST00000489169.1

CACUL1-204, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 2

Gene CACUL1, Length 517 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-204ENST00000489169 SGSM2O43147 1006 aa8.86□□□□□ -0.99
CACUL1-204ENST00000489169 SERPINB2P05120 415 aa8.86□□□□□ -0.99
CACUL1-204ENST00000489169 RPLP1P05386 114 aaKnown RBP8.86□□□□□ -0.99
CACUL1-204ENST00000489169 CTSHP09668 335 aa8.86□□□□□ -0.99
CACUL1-204ENST00000489169 PCSK2P16519 638 aa8.86□□□□□ -0.99
CACUL1-204ENST00000489169 ANAPC15P60006 121 aa8.86□□□□□ -0.99
CACUL1-204ENST00000489169 TTF1Q15361 905 aaPredicted RBP8.86□□□□□ -0.99
CACUL1-204ENST00000489169 ZNF827Q17R98 1081 aa8.86□□□□□ -0.99
CACUL1-204ENST00000489169 TTC39AQ5SRH9 613 aa8.86□□□□□ -0.99
CACUL1-204ENST00000489169 PRR5LQ6MZQ0 368 aa8.86□□□□□ -0.99
CACUL1-204ENST00000489169 KIAA1211Q6ZU35 1233 aa8.86□□□□□ -0.99
CACUL1-204ENST00000489169 KBTBD3Q8NAB2 608 aa8.86□□□□□ -0.99
CACUL1-204ENST00000489169 IL17RAQ96F46 866 aa8.86□□□□□ -0.99
CACUL1-204ENST00000489169 CRELD1Q96HD1 420 aa8.86□□□□□ -0.99
CACUL1-204ENST00000489169 FSD1Q9BTV5 496 aa8.86□□□□□ -0.99
CACUL1-204ENST00000489169 BOLA2Q9H3K6 86 aa8.86□□□□□ -0.99
CACUL1-204ENST00000489169 CCSER2Q9H7U1 834 aa8.86□□□□□ -0.99
CACUL1-204ENST00000489169 KLK14Q9P0G3 267 aa8.86□□□□□ -0.99
CACUL1-204ENST00000489169 HCN2Q9UL51 889 aa8.86□□□□□ -0.99
CACUL1-204ENST00000489169 ZNF232Q9UNY5 417 aa8.86□□□□□ -0.99
CACUL1-204ENST00000489169 NRXN2Q9P2S2 1712 aa8.85□□□□□ -0.99
CACUL1-204ENST00000489169 EIF1AYO14602 144 aaKnown RBP8.85□□□□□ -0.99
CACUL1-204ENST00000489169 BBOX1O75936 387 aa8.85□□□□□ -0.99
CACUL1-204ENST00000489169 YBX3P16989 372 aaKnown RBP eCLIP8.85□□□□□ -0.99
CACUL1-204ENST00000489169 HOXA10P31260 410 aaPredicted RBP8.85□□□□□ -0.99
CACUL1-204ENST00000489169 TIMM10P62072 90 aa8.85□□□□□ -0.99
CACUL1-204ENST00000489169 CHRNDQ07001 517 aa8.85□□□□□ -0.99
CACUL1-204ENST00000489169 GRAPQ13588 217 aa8.85□□□□□ -0.99
CACUL1-204ENST00000489169 SLC15A2Q16348 729 aa8.85□□□□□ -0.99
CACUL1-204ENST00000489169 ZSCAN25Q6NSZ9 544 aa8.85□□□□□ -0.99
CACUL1-204ENST00000489169 COL23A1Q86Y22 540 aaPredicted RBP8.85□□□□□ -0.99
CACUL1-204ENST00000489169 GRAPLQ8TC17 118 aaPredicted RBP8.85□□□□□ -0.99
CACUL1-204ENST00000489169 RBM17Q96I25 401 aaKnown RBP8.85□□□□□ -0.99
CACUL1-204ENST00000489169 CRAMP1Q96RY5 1269 aa8.85□□□□□ -0.99
CACUL1-204ENST00000489169 BRIP1Q9BX63 1249 aa8.85□□□□□ -0.99
CACUL1-204ENST00000489169 USP26Q9BXU7 913 aa8.85□□□□□ -0.99
CACUL1-204ENST00000489169 PHACTR1Q9C0D0 580 aa8.85□□□□□ -0.99
CACUL1-204ENST00000489169 SEC31BQ9NQW1 1179 aa8.85□□□□□ -0.99
CACUL1-204ENST00000489169 GNL3LQ9NVN8 582 aaKnown RBP8.85□□□□□ -0.99
CACUL1-204ENST00000489169 PAG1Q9NWQ8 432 aa8.85□□□□□ -0.99
CACUL1-204ENST00000489169 PRKAG2Q9UGJ0 569 aa8.85□□□□□ -0.99
CACUL1-204ENST00000489169 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.85□□□□□ -0.99
CACUL1-204ENST00000489169 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.85□□□□□ -0.99
CACUL1-204ENST00000489169 PDS5AQ29RF7 1337 aaKnown RBP8.84□□□□□ -0.99
CACUL1-204ENST00000489169 PNPLA7Q6ZV29 1317 aa8.84□□□□□ -0.99
CACUL1-204ENST00000489169 PTMSP20962 102 aa8.84□□□□□ -0.99
CACUL1-204ENST00000489169 PDE6BP35913 854 aa8.84□□□□□ -0.99
CACUL1-204ENST00000489169 FSTL1Q12841 308 aa8.84□□□□□ -0.99
CACUL1-204ENST00000489169 RABEP1Q15276 862 aa8.84□□□□□ -0.99
CACUL1-204ENST00000489169 DPH6Q7L8W6 267 aa8.84□□□□□ -0.99
CACUL1-204ENST00000489169 C7orf43Q8WVR3 580 aa8.84□□□□□ -0.99
CACUL1-204ENST00000489169 RPGRQ92834 1020 aaKnown RBP8.84□□□□□ -0.99
CACUL1-204ENST00000489169 BTBD6Q96KE9 485 aa8.84□□□□□ -0.99
CACUL1-204ENST00000489169 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.84□□□□□ -0.99
CACUL1-204ENST00000489169 ACBD3Q9H3P7 528 aa8.84□□□□□ -0.99
CACUL1-204ENST00000489169 RRAGCQ9HB90 399 aa8.84□□□□□ -0.99
CACUL1-204ENST00000489169 FAM13BQ9NYF5 915 aa8.84□□□□□ -0.99
CACUL1-204ENST00000489169 ZDHHC3Q9NYG2 299 aa8.84□□□□□ -0.99
CACUL1-204ENST00000489169 MINPP1Q9UNW1 487 aa8.84□□□□□ -0.99
CACUL1-204ENST00000489169 PARP3Q9Y6F1 533 aa8.84□□□□□ -0.99
CACUL1-204ENST00000489169 ZNF804BA4D1E1 1349 aa8.83□□□□□ -1
CACUL1-204ENST00000489169 ATXN7O15265 892 aaPredicted RBP8.83□□□□□ -1
CACUL1-204ENST00000489169 DGKGP49619 791 aa8.83□□□□□ -1
CACUL1-204ENST00000489169 CTCFP49711 727 aaPredicted RBP8.83□□□□□ -1
CACUL1-204ENST00000489169 TNP2Q05952 138 aa8.83□□□□□ -1
CACUL1-204ENST00000489169 DDR1Q08345 913 aa8.83□□□□□ -1
CACUL1-204ENST00000489169 ORC1Q13415 861 aa8.83□□□□□ -1
CACUL1-204ENST00000489169 GNL2Q13823 731 aaKnown RBP8.83□□□□□ -1
CACUL1-204ENST00000489169 CAVIN4Q5BKX8 364 aa8.83□□□□□ -1
CACUL1-204ENST00000489169 C15orf52Q6ZUT6 534 aaKnown RBP8.83□□□□□ -1
CACUL1-204ENST00000489169 TREML1Q86YW5 311 aa8.83□□□□□ -1
CACUL1-204ENST00000489169 SLC17A8Q8NDX2 589 aa8.83□□□□□ -1
CACUL1-204ENST00000489169 SNX21Q969T3 373 aa8.83□□□□□ -1
CACUL1-204ENST00000489169 DNAJC2Q99543 621 aaKnown RBP8.83□□□□□ -1
CACUL1-204ENST00000489169 CAPN10Q9HC96 672 aa8.83□□□□□ -1
CACUL1-204ENST00000489169 AVENQ9NQS1 362 aaPredicted RBP8.83□□□□□ -1
CACUL1-204ENST00000489169 HELLSQ9NRZ9 838 aa8.83□□□□□ -1
CACUL1-204ENST00000489169 DDX41Q9UJV9 622 aaKnown RBP8.83□□□□□ -1
CACUL1-204ENST00000489169 LEMD3Q9Y2U8 911 aa8.83□□□□□ -1
CACUL1-204ENST00000489169 MED23Q9ULK4 1368 aa8.83□□□□□ -1
CACUL1-204ENST00000489169 A0A1W2PNR3 127 aa8.82□□□□□ -1
CACUL1-204ENST00000489169 GIPC1O14908 333 aa8.82□□□□□ -1
CACUL1-204ENST00000489169 NPR1P16066 1061 aa8.82□□□□□ -1
CACUL1-204ENST00000489169 ATP2B1P20020 1258 aa8.82□□□□□ -1
CACUL1-204ENST00000489169 NFKBIBQ15653 356 aa8.82□□□□□ -1
CACUL1-204ENST00000489169 SMIM5Q71RC9 77 aa8.82□□□□□ -1
CACUL1-204ENST00000489169 GPR152Q8TDT2 470 aa8.82□□□□□ -1
CACUL1-204ENST00000489169 CELF1Q92879 486 aaKnown RBP8.82□□□□□ -1
CACUL1-204ENST00000489169 HMG20BQ9P0W2 317 aa8.82□□□□□ -1
CACUL1-204ENST00000489169 BCS1LQ9Y276 419 aa8.82□□□□□ -1
CACUL1-204ENST00000489169 TNRC6CQ9HCJ0 1690 aaKnown RBP8.81□□□□□ -1
CACUL1-204ENST00000489169 XDHP47989 1333 aa8.81□□□□□ -1
CACUL1-204ENST00000489169 GOLGB1Q14789 3259 aaKnown RBP8.81□□□□□ -1
CACUL1-204ENST00000489169 PIK3R2O00459 728 aa8.81□□□□□ -1
CACUL1-204ENST00000489169 GOLIM4O00461 696 aa8.81□□□□□ -1
CACUL1-204ENST00000489169 GNB5O14775 395 aa8.81□□□□□ -1
CACUL1-204ENST00000489169 RNF113AO15541 343 aaKnown RBP8.81□□□□□ -1
CACUL1-204ENST00000489169 MAP4K4O95819 1239 aaPredicted RBP8.81□□□□□ -1
CACUL1-204ENST00000489169 MMP10P09238 476 aa8.81□□□□□ -1
CACUL1-204ENST00000489169 MAPTP10636 758 aaKnown RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms