RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 PRKAG2Q9UGJ0 569 aa10.7□□□□□ -0.7
HDAC6-232ENST00000489053 PRR12Q9ULL5 1215 aa10.7□□□□□ -0.7
HDAC6-232ENST00000489053 B4E1Z4 1266 aa10.69□□□□□ -0.7
HDAC6-232ENST00000489053 DNM1LO00429 736 aa10.69□□□□□ -0.7
HDAC6-232ENST00000489053 CHMLP26374 656 aa10.69□□□□□ -0.7
HDAC6-232ENST00000489053 SLC16A2P36021 539 aa10.69□□□□□ -0.7
HDAC6-232ENST00000489053 SNAP25P60880 206 aa10.69□□□□□ -0.7
HDAC6-232ENST00000489053 ZNF792Q3KQV3 632 aa10.69□□□□□ -0.7
HDAC6-232ENST00000489053 PRAMEF19Q5SWL8 479 aa10.69□□□□□ -0.7
HDAC6-232ENST00000489053 IFIT1BQ5T764 474 aaKnown RBP10.69□□□□□ -0.7
HDAC6-232ENST00000489053 NOL8Q76FK4 1167 aaKnown RBP10.69□□□□□ -0.7
HDAC6-232ENST00000489053 UBE2Q1Q7Z7E8 422 aa10.69□□□□□ -0.7
HDAC6-232ENST00000489053 RNF180Q86T96 592 aa10.69□□□□□ -0.7
HDAC6-232ENST00000489053 DGKHQ86XP1 1220 aa10.69□□□□□ -0.7
HDAC6-232ENST00000489053 MSL3Q8N5Y2 521 aaKnown RBP10.69□□□□□ -0.7
HDAC6-232ENST00000489053 PNMA1Q8ND90 353 aa10.69□□□□□ -0.7
HDAC6-232ENST00000489053 AGBL1Q96MI9 1066 aa10.69□□□□□ -0.7
HDAC6-232ENST00000489053 SENP6Q9GZR1 1112 aaPredicted RBP10.69□□□□□ -0.7
HDAC6-232ENST00000489053 RIPK3Q9Y572 518 aa10.69□□□□□ -0.7
HDAC6-232ENST00000489053 TNKSO95271 1327 aa10.68□□□□□ -0.7
HDAC6-232ENST00000489053 SYNGAP1Q96PV0 1343 aa10.68□□□□□ -0.7
HDAC6-232ENST00000489053 PTPDC1A2A3K4 754 aa10.68□□□□□ -0.7
HDAC6-232ENST00000489053 ASB14A6NK59 587 aa10.68□□□□□ -0.7
HDAC6-232ENST00000489053 ICAM1P05362 532 aa10.68□□□□□ -0.7
HDAC6-232ENST00000489053 PDHBP11177 359 aa10.68□□□□□ -0.7
HDAC6-232ENST00000489053 AKR1A1P14550 325 aa10.68□□□□□ -0.7
HDAC6-232ENST00000489053 GJC2Q5T442 439 aaPredicted RBP10.68□□□□□ -0.7
HDAC6-232ENST00000489053 LHX8Q68G74 356 aa10.68□□□□□ -0.7
HDAC6-232ENST00000489053 CHRDL2Q6WN34 429 aa10.68□□□□□ -0.7
HDAC6-232ENST00000489053 XPNPEP3Q9NQH7 507 aa10.68□□□□□ -0.7
HDAC6-232ENST00000489053 FAM184BQ9ULE4 1060 aa10.68□□□□□ -0.7
HDAC6-232ENST00000489053 A0A0G2JMZ2 1700 aa10.67□□□□□ -0.7
HDAC6-232ENST00000489053 B4DLN1 442 aa10.67□□□□□ -0.7
HDAC6-232ENST00000489053 IFIT3O14879 490 aaKnown RBP10.67□□□□□ -0.7
HDAC6-232ENST00000489053 PARP1P09874 1014 aaKnown RBP10.67□□□□□ -0.7
HDAC6-232ENST00000489053 MRPL12P52815 198 aaKnown RBP10.67□□□□□ -0.7
HDAC6-232ENST00000489053 ATN1P54259 1190 aaPredicted RBP10.67□□□□□ -0.7
HDAC6-232ENST00000489053 ZNF543Q08ER8 600 aa10.67□□□□□ -0.7
HDAC6-232ENST00000489053 ASPRV1Q53RT3 343 aa10.67□□□□□ -0.7
HDAC6-232ENST00000489053 TTBK2Q6IQ55 1244 aa10.67□□□□□ -0.7
HDAC6-232ENST00000489053 ZNF467Q7Z7K2 595 aaPredicted RBP10.67□□□□□ -0.7
HDAC6-232ENST00000489053 TRPV1Q8NER1 839 aa10.67□□□□□ -0.7
HDAC6-232ENST00000489053 LBHD1Q9BQE6 289 aaPredicted RBP10.67□□□□□ -0.7
HDAC6-232ENST00000489053 ABHD16BQ9H3Z7 469 aa10.67□□□□□ -0.7
HDAC6-232ENST00000489053 ADD3Q9UEY8 706 aaKnown RBP10.67□□□□□ -0.7
HDAC6-232ENST00000489053 TACC3Q9Y6A5 838 aa10.67□□□□□ -0.7
HDAC6-232ENST00000489053 DOCK3Q8IZD9 2030 aa10.67□□□□□ -0.7
HDAC6-232ENST00000489053 GREB1LQ9C091 1923 aaPredicted RBP10.66□□□□□ -0.7
HDAC6-232ENST00000489053 ZNF236Q9UL36 1845 aa10.66□□□□□ -0.7
HDAC6-232ENST00000489053 SGSM2O43147 1006 aa10.66□□□□□ -0.7
HDAC6-232ENST00000489053 GOLGA8HP0CJ92 632 aa10.66□□□□□ -0.7
HDAC6-232ENST00000489053 ACVR2BQ13705 512 aa10.66□□□□□ -0.7
HDAC6-232ENST00000489053 ARMCX2Q7L311 632 aa10.66□□□□□ -0.7
HDAC6-232ENST00000489053 RASGRP2Q7LDG7 609 aa10.66□□□□□ -0.7
HDAC6-232ENST00000489053 ENAHQ8N8S7 591 aaPredicted RBP10.66□□□□□ -0.7
HDAC6-232ENST00000489053 NCOA7Q8NI08 942 aa10.66□□□□□ -0.7
HDAC6-232ENST00000489053 VTI1AQ96AJ9 217 aa10.66□□□□□ -0.7
HDAC6-232ENST00000489053 RANBP17Q9H2T7 1088 aaKnown RBP10.66□□□□□ -0.7
HDAC6-232ENST00000489053 ANO2Q9NQ90 1003 aa10.66□□□□□ -0.7
HDAC6-232ENST00000489053 A1CFQ9NQ94 594 aaKnown RBP10.66□□□□□ -0.7
HDAC6-232ENST00000489053 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.66□□□□□ -0.7
HDAC6-232ENST00000489053 ZSWIM5Q9P217 1185 aa10.66□□□□□ -0.7
HDAC6-232ENST00000489053 ZMYND8Q9ULU4 1186 aaPredicted RBP10.66□□□□□ -0.7
HDAC6-232ENST00000489053 COLQQ9Y215 455 aaPredicted RBP10.66□□□□□ -0.7
HDAC6-232ENST00000489053 ATP11BQ9Y2G3 1177 aa10.66□□□□□ -0.7
HDAC6-232ENST00000489053 PLXNB2O15031 1838 aa10.65□□□□□ -0.7
HDAC6-232ENST00000489053 MYH4Q9Y623 1939 aa10.65□□□□□ -0.7
HDAC6-232ENST00000489053 CALML3P27482 149 aa10.65□□□□□ -0.7
HDAC6-232ENST00000489053 ADCYAP1R1P41586 468 aa10.65□□□□□ -0.7
HDAC6-232ENST00000489053 NOVP48745 357 aa10.65□□□□□ -0.7
HDAC6-232ENST00000489053 TRAF1Q13077 416 aa10.65□□□□□ -0.7
HDAC6-232ENST00000489053 WTAPQ15007 396 aa10.65□□□□□ -0.7
HDAC6-232ENST00000489053 USH1GQ495M9 461 aa10.65□□□□□ -0.7
HDAC6-232ENST00000489053 HABP4Q5JVS0 413 aaKnown RBP10.65□□□□□ -0.7
HDAC6-232ENST00000489053 RNF20Q5VTR2 975 aa10.65□□□□□ -0.7
HDAC6-232ENST00000489053 BTNL9Q6UXG8 535 aa10.65□□□□□ -0.7
HDAC6-232ENST00000489053 NFXL1Q6ZNB6 911 aa10.65□□□□□ -0.7
HDAC6-232ENST00000489053 CATIPQ7Z7H3 387 aa10.65□□□□□ -0.7
HDAC6-232ENST00000489053 CCDC144CPQ8IYA2 1237 aa10.65□□□□□ -0.7
HDAC6-232ENST00000489053 FERMT2Q96AC1 680 aa10.65□□□□□ -0.7
HDAC6-232ENST00000489053 UBA5Q9GZZ9 404 aa10.65□□□□□ -0.7
HDAC6-232ENST00000489053 VAT1LQ9HCJ6 419 aa10.65□□□□□ -0.7
HDAC6-232ENST00000489053 ZNF536O15090 1300 aa10.64□□□□□ -0.71
HDAC6-232ENST00000489053 DNAJC25-GNG10A0A024R161 153 aa10.64□□□□□ -0.71
HDAC6-232ENST00000489053 PGK1P00558 417 aa10.64□□□□□ -0.71
HDAC6-232ENST00000489053 TAL1P17542 331 aaPredicted RBP10.64□□□□□ -0.71
HDAC6-232ENST00000489053 SYN1P17600 705 aa10.64□□□□□ -0.71
HDAC6-232ENST00000489053 CNTN2Q02246 1040 aa10.64□□□□□ -0.71
HDAC6-232ENST00000489053 PTH1RQ03431 593 aa10.64□□□□□ -0.71
HDAC6-232ENST00000489053 PDE4DQ08499 809 aa10.64□□□□□ -0.71
HDAC6-232ENST00000489053 LRRC41Q15345 812 aa10.64□□□□□ -0.71
HDAC6-232ENST00000489053 BMP2KLQ5H9B9 411 aa10.64□□□□□ -0.71
HDAC6-232ENST00000489053 MUM1L1Q5H9M0 696 aa10.64□□□□□ -0.71
HDAC6-232ENST00000489053 TMEM67Q5HYA8 995 aa10.64□□□□□ -0.71
HDAC6-232ENST00000489053 MAMDC4Q6UXC1 1216 aa10.64□□□□□ -0.71
HDAC6-232ENST00000489053 RNF207Q6ZRF8 634 aa10.64□□□□□ -0.71
HDAC6-232ENST00000489053 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.64□□□□□ -0.71
HDAC6-232ENST00000489053 MCF2L2Q86YR7 1114 aa10.64□□□□□ -0.71
HDAC6-232ENST00000489053 NUP133Q8WUM0 1156 aa10.64□□□□□ -0.71
HDAC6-232ENST00000489053 AP5M1Q9H0R1 490 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms