RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 PLEKHM2Q8IWE5 1019 aa26.71■■□□□ 1.87
PTPN4-211ENST00000488279 LRCH3Q96II8 777 aa26.71■■□□□ 1.87
PTPN4-211ENST00000488279 OSBPL3Q9H4L5 887 aa26.71■■□□□ 1.87
PTPN4-211ENST00000488279 FAM184BQ9ULE4 1060 aa26.71■■□□□ 1.87
PTPN4-211ENST00000488279 CCDC171Q6TFL3 1326 aa26.7■■□□□ 1.87
PTPN4-211ENST00000488279 SDSP20132 328 aa26.7■■□□□ 1.86
PTPN4-211ENST00000488279 LRIT3Q3SXY7 679 aa26.7■■□□□ 1.86
PTPN4-211ENST00000488279 AGBL1Q96MI9 1066 aa26.7■■□□□ 1.86
PTPN4-211ENST00000488279 ACAD9Q9H845 621 aa26.7■■□□□ 1.86
PTPN4-211ENST00000488279 PHF24Q9UPV7 400 aa26.7■■□□□ 1.86
PTPN4-211ENST00000488279 ZMYM6O95789 1325 aa26.69■■□□□ 1.86
PTPN4-211ENST00000488279 SNX17Q15036 470 aa26.69■■□□□ 1.86
PTPN4-211ENST00000488279 ZHX1Q9UKY1 873 aaPredicted RBP26.69■■□□□ 1.86
PTPN4-211ENST00000488279 MTMR7Q9Y216 660 aa26.69■■□□□ 1.86
PTPN4-211ENST00000488279 ZNF536O15090 1300 aa26.68■■□□□ 1.86
PTPN4-211ENST00000488279 ACVR2BQ13705 512 aa26.68■■□□□ 1.86
PTPN4-211ENST00000488279 TKFCQ3LXA3 575 aa26.68■■□□□ 1.86
PTPN4-211ENST00000488279 C1orf53Q5VUE5 145 aa26.68■■□□□ 1.86
PTPN4-211ENST00000488279 DCAF4Q8WV16 495 aa26.68■■□□□ 1.86
PTPN4-211ENST00000488279 ABHD16BQ9H3Z7 469 aa26.68■■□□□ 1.86
PTPN4-211ENST00000488279 TCP11L1Q9NUJ3 509 aa26.68■■□□□ 1.86
PTPN4-211ENST00000488279 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.68■■□□□ 1.86
PTPN4-211ENST00000488279 PRR12Q9ULL5 1215 aa26.68■■□□□ 1.86
PTPN4-211ENST00000488279 LAMA2P24043 3122 aaKnown RBP26.68■■□□□ 1.86
PTPN4-211ENST00000488279 PCP11498 1178 aaKnown RBP26.67■■□□□ 1.86
PTPN4-211ENST00000488279 HAND2P61296 217 aa26.67■■□□□ 1.86
PTPN4-211ENST00000488279 TRIM60Q495X7 471 aa26.67■■□□□ 1.86
PTPN4-211ENST00000488279 MFSD6Q6ZSS7 791 aa26.67■■□□□ 1.86
PTPN4-211ENST00000488279 TRERF1Q96PN7 1200 aa26.67■■□□□ 1.86
PTPN4-211ENST00000488279 RNF146Q9NTX7 359 aa26.67■■□□□ 1.86
PTPN4-211ENST00000488279 POTEB2H3BUK9 544 aa26.66■■□□□ 1.86
PTPN4-211ENST00000488279 TOP1P11387 765 aaKnown RBP26.66■■□□□ 1.86
PTPN4-211ENST00000488279 CCDC96Q2M329 555 aa26.66■■□□□ 1.86
PTPN4-211ENST00000488279 GPR153Q6NV75 609 aa26.66■■□□□ 1.86
PTPN4-211ENST00000488279 CCDC174Q6PII3 467 aa26.66■■□□□ 1.86
PTPN4-211ENST00000488279 LENG1Q96BZ8 264 aaPredicted RBP26.66■■□□□ 1.86
PTPN4-211ENST00000488279 FGD4Q96M96 766 aa26.66■■□□□ 1.86
PTPN4-211ENST00000488279 TSEN34Q9BSV6 310 aaKnown RBP26.66■■□□□ 1.86
PTPN4-211ENST00000488279 PLXNA1Q9UIW2 1896 aa26.66■■□□□ 1.86
PTPN4-211ENST00000488279 SMCHD1A6NHR9 2005 aa26.65■■□□□ 1.86
PTPN4-211ENST00000488279 ADAMTS4O75173 837 aa26.65■■□□□ 1.86
PTPN4-211ENST00000488279 DUSP11O75319 330 aaKnown RBP26.65■■□□□ 1.86
PTPN4-211ENST00000488279 ALAS1P13196 640 aa26.65■■□□□ 1.86
PTPN4-211ENST00000488279 SNAP25P60880 206 aa26.65■■□□□ 1.86
PTPN4-211ENST00000488279 AKNAD1Q5T1N1 836 aa26.65■■□□□ 1.86
PTPN4-211ENST00000488279 ARMCX2Q7L311 632 aa26.65■■□□□ 1.86
PTPN4-211ENST00000488279 CCDC144CPQ8IYA2 1237 aa26.65■■□□□ 1.86
PTPN4-211ENST00000488279 TMEM47Q9BQJ4 181 aa26.65■■□□□ 1.86
PTPN4-211ENST00000488279 A1CFQ9NQ94 594 aaKnown RBP26.65■■□□□ 1.86
PTPN4-211ENST00000488279 PRDM5Q9NQX1 630 aaPredicted RBP26.65■■□□□ 1.86
PTPN4-211ENST00000488279 A0A1W2PQ45 241 aaPredicted RBP26.64■■□□□ 1.86
PTPN4-211ENST00000488279 A0A1W2PQY0 241 aa26.64■■□□□ 1.86
PTPN4-211ENST00000488279 CNTN2Q02246 1040 aa26.64■■□□□ 1.86
PTPN4-211ENST00000488279 CWC27Q6UX04 472 aaKnown RBP26.64■■□□□ 1.86
PTPN4-211ENST00000488279 RASGRP2Q7LDG7 609 aa26.64■■□□□ 1.86
PTPN4-211ENST00000488279 FAM133AQ8N9E0 248 aa26.64■■□□□ 1.86
PTPN4-211ENST00000488279 TTC14Q96N46 770 aa26.64■■□□□ 1.86
PTPN4-211ENST00000488279 RNF41Q9H4P4 317 aaPredicted RBP26.64■■□□□ 1.86
PTPN4-211ENST00000488279 DIAPH3Q9NSV4 1193 aa26.64■■□□□ 1.86
PTPN4-211ENST00000488279 SYNRGQ9UMZ2 1314 aa26.64■■□□□ 1.85
PTPN4-211ENST00000488279 HIP1O00291 1037 aa26.63■■□□□ 1.85
PTPN4-211ENST00000488279 ZNF213O14771 459 aa26.63■■□□□ 1.85
PTPN4-211ENST00000488279 TLE2Q04725 743 aa26.63■■□□□ 1.85
PTPN4-211ENST00000488279 CCDC144BQ3MJ40 725 aa26.63■■□□□ 1.85
PTPN4-211ENST00000488279 KLHDC9Q8NEP7 349 aa26.63■■□□□ 1.85
PTPN4-211ENST00000488279 NUP133Q8WUM0 1156 aa26.63■■□□□ 1.85
PTPN4-211ENST00000488279 CCPG1Q9ULG6 757 aa26.63■■□□□ 1.85
PTPN4-211ENST00000488279 ACLYP53396 1101 aa26.62■■□□□ 1.85
PTPN4-211ENST00000488279 TTBK2Q6IQ55 1244 aa26.62■■□□□ 1.85
PTPN4-211ENST00000488279 BTNL9Q6UXG8 535 aa26.62■■□□□ 1.85
PTPN4-211ENST00000488279 SPC25Q9HBM1 224 aa26.62■■□□□ 1.85
PTPN4-211ENST00000488279 SUPT16HQ9Y5B9 1047 aaKnown RBP26.62■■□□□ 1.85
PTPN4-211ENST00000488279 MOXD2PA6NHM9 499 aa26.61■■□□□ 1.85
PTPN4-211ENST00000488279 ASB14A6NK59 587 aa26.61■■□□□ 1.85
PTPN4-211ENST00000488279 ICAM1P05362 532 aa26.61■■□□□ 1.85
PTPN4-211ENST00000488279 SLC16A2P36021 539 aa26.61■■□□□ 1.85
PTPN4-211ENST00000488279 KCNA10Q16322 511 aa26.61■■□□□ 1.85
PTPN4-211ENST00000488279 ESR2Q92731 530 aa26.61■■□□□ 1.85
PTPN4-211ENST00000488279 RANBP17Q9H2T7 1088 aaKnown RBP26.61■■□□□ 1.85
PTPN4-211ENST00000488279 PDLIM7Q9NR12 457 aa26.61■■□□□ 1.85
PTPN4-211ENST00000488279 SOWAHBA6NEL2 793 aa26.6■■□□□ 1.85
PTPN4-211ENST00000488279 MUM1L1Q5H9M0 696 aa26.6■■□□□ 1.85
PTPN4-211ENST00000488279 SYDE2Q5VT97 1194 aa26.6■■□□□ 1.85
PTPN4-211ENST00000488279 TBC1D10CQ8IV04 446 aa26.6■■□□□ 1.85
PTPN4-211ENST00000488279 GPCPD1Q9NPB8 672 aa26.6■■□□□ 1.85
PTPN4-211ENST00000488279 STARD7Q9NQZ5 370 aa26.6■■□□□ 1.85
PTPN4-211ENST00000488279 TRIM43BA6NCK2 446 aa26.59■■□□□ 1.85
PTPN4-211ENST00000488279 C6orf222P0C671 652 aaPredicted RBP26.59■■□□□ 1.85
PTPN4-211ENST00000488279 CCSAPQ6IQ19 270 aaPredicted RBP26.59■■□□□ 1.85
PTPN4-211ENST00000488279 SH3RF1Q7Z6J0 888 aa26.59■■□□□ 1.85
PTPN4-211ENST00000488279 PCSK9Q8NBP7 692 aaKnown RBP26.59■■□□□ 1.85
PTPN4-211ENST00000488279 BADQ92934 168 aa26.59■■□□□ 1.85
PTPN4-211ENST00000488279 TRIM43Q96BQ3 446 aaPredicted RBP26.59■■□□□ 1.85
PTPN4-211ENST00000488279 CYP39A1Q9NYL5 469 aa26.59■■□□□ 1.85
PTPN4-211ENST00000488279 FRMPD2Q68DX3 1309 aaPredicted RBP26.59■■□□□ 1.85
PTPN4-211ENST00000488279 PQBP1O60828 265 aaKnown RBP26.58■■□□□ 1.85
PTPN4-211ENST00000488279 CLTBP09497 229 aa26.58■■□□□ 1.85
PTPN4-211ENST00000488279 PDHBP11177 359 aa26.58■■□□□ 1.85
PTPN4-211ENST00000488279 NT5C2P49902 561 aa26.58■■□□□ 1.85
PTPN4-211ENST00000488279 GJA9P57773 515 aa26.58■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms