RNA–Protein interactions for RNA: ENST00000488235.1

PCYT1A-215, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 3

Gene PCYT1A, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-215ENST00000488235 DDX11Q96FC9 970 aa13.31□□□□□ -0.28
PCYT1A-215ENST00000488235 KATNBL1Q9H079 304 aa13.31□□□□□ -0.28
PCYT1A-215ENST00000488235 PDLIM7Q9NR12 457 aa13.31□□□□□ -0.28
PCYT1A-215ENST00000488235 ISY1Q9ULR0 285 aaKnown RBP13.31□□□□□ -0.28
PCYT1A-215ENST00000488235 PHF24Q9UPV7 400 aa13.31□□□□□ -0.28
PCYT1A-215ENST00000488235 LTBP2Q14767 1821 aa13.31□□□□□ -0.28
PCYT1A-215ENST00000488235 SYNGAP1Q96PV0 1343 aa13.31□□□□□ -0.28
PCYT1A-215ENST00000488235 SYNRGQ9UMZ2 1314 aa13.31□□□□□ -0.28
PCYT1A-215ENST00000488235 A0A1W2PQ45 241 aaPredicted RBP13.3□□□□□ -0.28
PCYT1A-215ENST00000488235 A0A1W2PQY0 241 aa13.3□□□□□ -0.28
PCYT1A-215ENST00000488235 TRIM43BA6NCK2 446 aa13.3□□□□□ -0.28
PCYT1A-215ENST00000488235 SOWAHBA6NEL2 793 aa13.3□□□□□ -0.28
PCYT1A-215ENST00000488235 ORC4O43929 436 aa13.3□□□□□ -0.28
PCYT1A-215ENST00000488235 AKR1A1P14550 325 aa13.3□□□□□ -0.28
PCYT1A-215ENST00000488235 SLC1A4P43007 532 aa13.3□□□□□ -0.28
PCYT1A-215ENST00000488235 OAZ1P54368 228 aa13.3□□□□□ -0.28
PCYT1A-215ENST00000488235 TLE2Q04725 743 aa13.3□□□□□ -0.28
PCYT1A-215ENST00000488235 MUM1L1Q5H9M0 696 aa13.3□□□□□ -0.28
PCYT1A-215ENST00000488235 RRP12Q5JTH9 1297 aaKnown RBP13.3□□□□□ -0.28
PCYT1A-215ENST00000488235 TTBK2Q6IQ55 1244 aa13.3□□□□□ -0.28
PCYT1A-215ENST00000488235 CCDC174Q6PII3 467 aa13.3□□□□□ -0.28
PCYT1A-215ENST00000488235 TBC1D10CQ8IV04 446 aa13.3□□□□□ -0.28
PCYT1A-215ENST00000488235 PLEKHM2Q8IWE5 1019 aa13.3□□□□□ -0.28
PCYT1A-215ENST00000488235 ANKRD35Q8N283 1001 aa13.3□□□□□ -0.28
PCYT1A-215ENST00000488235 STAG1Q8WVM7 1258 aa13.3□□□□□ -0.28
PCYT1A-215ENST00000488235 TRIM43Q96BQ3 446 aaPredicted RBP13.3□□□□□ -0.28
PCYT1A-215ENST00000488235 PURBQ96QR8 312 aaKnown RBP13.3□□□□□ -0.28
PCYT1A-215ENST00000488235 A1CFQ9NQ94 594 aaKnown RBP13.3□□□□□ -0.28
PCYT1A-215ENST00000488235 PRDM5Q9NQX1 630 aaPredicted RBP13.3□□□□□ -0.28
PCYT1A-215ENST00000488235 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.3□□□□□ -0.28
PCYT1A-215ENST00000488235 ZBTB47Q9UFB7 747 aaPredicted RBP13.3□□□□□ -0.28
PCYT1A-215ENST00000488235 ZHX1Q9UKY1 873 aaPredicted RBP13.3□□□□□ -0.28
PCYT1A-215ENST00000488235 PRR12Q9ULL5 1215 aa13.3□□□□□ -0.28
PCYT1A-215ENST00000488235 SPTBN5Q9NRC6 3674 aaKnown RBP13.29□□□□□ -0.28
PCYT1A-215ENST00000488235 MCM3APO60318 1980 aa13.29□□□□□ -0.28
PCYT1A-215ENST00000488235 TRIM6-TRIM34B2RNG4 842 aa13.29□□□□□ -0.28
PCYT1A-215ENST00000488235 SLC16A2P36021 539 aa13.29□□□□□ -0.28
PCYT1A-215ENST00000488235 NUCB1Q02818 461 aa13.29□□□□□ -0.28
PCYT1A-215ENST00000488235 ACVR2BQ13705 512 aa13.29□□□□□ -0.28
PCYT1A-215ENST00000488235 CCSAPQ6IQ19 270 aaPredicted RBP13.29□□□□□ -0.28
PCYT1A-215ENST00000488235 RCSD1Q6JBY9 416 aa13.29□□□□□ -0.28
PCYT1A-215ENST00000488235 ZNF467Q7Z7K2 595 aaPredicted RBP13.29□□□□□ -0.28
PCYT1A-215ENST00000488235 CHD1LQ86WJ1 897 aa13.29□□□□□ -0.28
PCYT1A-215ENST00000488235 CCDC144CPQ8IYA2 1237 aa13.29□□□□□ -0.28
PCYT1A-215ENST00000488235 MSL3Q8N5Y2 521 aaKnown RBP13.29□□□□□ -0.28
PCYT1A-215ENST00000488235 FAM133AQ8N9E0 248 aa13.29□□□□□ -0.28
PCYT1A-215ENST00000488235 KLHDC9Q8NEP7 349 aa13.29□□□□□ -0.28
PCYT1A-215ENST00000488235 CHST13Q8NET6 341 aa13.29□□□□□ -0.28
PCYT1A-215ENST00000488235 RILPL2Q969X0 211 aa13.29□□□□□ -0.28
PCYT1A-215ENST00000488235 RNF146Q9NTX7 359 aa13.29□□□□□ -0.28
PCYT1A-215ENST00000488235 CNPY2Q9Y2B0 182 aa13.29□□□□□ -0.28
PCYT1A-215ENST00000488235 CTDP1Q9Y5B0 961 aaPredicted RBP13.29□□□□□ -0.28
PCYT1A-215ENST00000488235 PLA2G6O60733 806 aa13.28□□□□□ -0.28
PCYT1A-215ENST00000488235 IKQ13123 557 aaPredicted RBP13.28□□□□□ -0.28
PCYT1A-215ENST00000488235 CCDC144BQ3MJ40 725 aa13.28□□□□□ -0.28
PCYT1A-215ENST00000488235 C9orf50Q5SZB4 431 aa13.28□□□□□ -0.28
PCYT1A-215ENST00000488235 TMEM63BQ5T3F8 832 aa13.28□□□□□ -0.28
PCYT1A-215ENST00000488235 C1orf53Q5VUE5 145 aa13.28□□□□□ -0.28
PCYT1A-215ENST00000488235 ARMCX2Q7L311 632 aa13.28□□□□□ -0.28
PCYT1A-215ENST00000488235 RNF180Q86T96 592 aa13.28□□□□□ -0.28
PCYT1A-215ENST00000488235 FAM160B2Q86V87 743 aa13.28□□□□□ -0.28
PCYT1A-215ENST00000488235 DEFB123Q8N688 67 aa13.28□□□□□ -0.28
PCYT1A-215ENST00000488235 CHURC1Q8WUH1 139 aa13.28□□□□□ -0.28
PCYT1A-215ENST00000488235 BADQ92934 168 aa13.28□□□□□ -0.28
PCYT1A-215ENST00000488235 LBHD1Q9BQE6 289 aaPredicted RBP13.28□□□□□ -0.28
PCYT1A-215ENST00000488235 TMEM47Q9BQJ4 181 aa13.28□□□□□ -0.28
PCYT1A-215ENST00000488235 IL25Q9H293 177 aa13.28□□□□□ -0.28
PCYT1A-215ENST00000488235 TOMM22Q9NS69 142 aa13.28□□□□□ -0.28
PCYT1A-215ENST00000488235 NEDD4P46934 1319 aa13.28□□□□□ -0.28
PCYT1A-215ENST00000488235 CCDC171Q6TFL3 1326 aa13.28□□□□□ -0.28
PCYT1A-215ENST00000488235 CHD7Q9P2D1 2997 aa13.28□□□□□ -0.28
PCYT1A-215ENST00000488235 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.27□□□□□ -0.29
PCYT1A-215ENST00000488235 CTAGE5O15320 804 aa13.27□□□□□ -0.29
PCYT1A-215ENST00000488235 PQBP1O60828 265 aaKnown RBP13.27□□□□□ -0.29
PCYT1A-215ENST00000488235 ALAS1P13196 640 aa13.27□□□□□ -0.29
PCYT1A-215ENST00000488235 SDSP20132 328 aa13.27□□□□□ -0.29
PCYT1A-215ENST00000488235 ACLYP53396 1101 aa13.27□□□□□ -0.29
PCYT1A-215ENST00000488235 EPHB4P54760 987 aa13.27□□□□□ -0.29
PCYT1A-215ENST00000488235 SHHQ15465 462 aa13.27□□□□□ -0.29
PCYT1A-215ENST00000488235 KCNA10Q16322 511 aa13.27□□□□□ -0.29
PCYT1A-215ENST00000488235 TRERF1Q96PN7 1200 aa13.27□□□□□ -0.29
PCYT1A-215ENST00000488235 OSBPL3Q9H4L5 887 aa13.27□□□□□ -0.29
PCYT1A-215ENST00000488235 ACAD9Q9H845 621 aa13.27□□□□□ -0.29
PCYT1A-215ENST00000488235 FBXO40Q9UH90 709 aa13.27□□□□□ -0.29
PCYT1A-215ENST00000488235 FAM184BQ9ULE4 1060 aa13.27□□□□□ -0.29
PCYT1A-215ENST00000488235 FRMPD2Q68DX3 1309 aaPredicted RBP13.27□□□□□ -0.29
PCYT1A-215ENST00000488235 POTEB2H3BUK9 544 aa13.26□□□□□ -0.29
PCYT1A-215ENST00000488235 DUSP11O75319 330 aaKnown RBP13.26□□□□□ -0.29
PCYT1A-215ENST00000488235 ZMYM6O95789 1325 aa13.26□□□□□ -0.29
PCYT1A-215ENST00000488235 FDX1P10109 184 aa13.26□□□□□ -0.29
PCYT1A-215ENST00000488235 CCDC96Q2M329 555 aa13.26□□□□□ -0.29
PCYT1A-215ENST00000488235 DCAF4Q8WV16 495 aa13.26□□□□□ -0.29
PCYT1A-215ENST00000488235 RANBP17Q9H2T7 1088 aaKnown RBP13.26□□□□□ -0.29
PCYT1A-215ENST00000488235 ABHD16BQ9H3Z7 469 aa13.26□□□□□ -0.29
PCYT1A-215ENST00000488235 RWDD1Q9H446 243 aaPredicted RBP13.26□□□□□ -0.29
PCYT1A-215ENST00000488235 GPCPD1Q9NPB8 672 aa13.26□□□□□ -0.29
PCYT1A-215ENST00000488235 MTMR10Q9NXD2 777 aa13.26□□□□□ -0.29
PCYT1A-215ENST00000488235 PRKAG2Q9UGJ0 569 aa13.26□□□□□ -0.29
PCYT1A-215ENST00000488235 LCTP09848 1927 aa13.25□□□□□ -0.29
PCYT1A-215ENST00000488235 NFIBO00712 420 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms