RNA–Protein interactions for RNA: ENST00000488117.5

C9orf72-205, Transcript of chromosome 9 open reading frame 72, humanhuman

TSL 2

Gene C9orf72, Length 4,808 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-205ENST00000488117 RTFDC1Q9BY42 306 aaPredicted RBP2.97□□□□□ -1.93
C9orf72-205ENST00000488117 TANGO6Q9C0B7 1094 aa2.97□□□□□ -1.93
C9orf72-205ENST00000488117 GBP3Q9H0R5 595 aa2.97□□□□□ -1.93
C9orf72-205ENST00000488117 DHX36Q9H2U1 1008 aaKnown RBP2.97□□□□□ -1.93
C9orf72-205ENST00000488117 DEF6Q9H4E7 631 aa2.97□□□□□ -1.93
C9orf72-205ENST00000488117 PODXL2Q9NZ53 605 aa2.97□□□□□ -1.93
C9orf72-205ENST00000488117 OGFRQ9NZT2 677 aa2.97□□□□□ -1.93
C9orf72-205ENST00000488117 BIN2Q9UBW5 565 aaPredicted RBP2.97□□□□□ -1.93
C9orf72-205ENST00000488117 STK17AQ9UEE5 414 aa2.97□□□□□ -1.93
C9orf72-205ENST00000488117 LRWD1Q9UFC0 647 aa2.97□□□□□ -1.93
C9orf72-205ENST00000488117 HDAC9Q9UKV0 1011 aa2.97□□□□□ -1.93
C9orf72-205ENST00000488117 A0A0U1RQG5 324 aaPredicted RBP2.97□□□□□ -1.93
C9orf72-205ENST00000488117 CTAGE9A4FU28 777 aa2.97□□□□□ -1.93
C9orf72-205ENST00000488117 STXBP3O00186 592 aa2.97□□□□□ -1.93
C9orf72-205ENST00000488117 FOXN1O15353 648 aa2.97□□□□□ -1.93
C9orf72-205ENST00000488117 SLC26A4O43511 780 aa2.97□□□□□ -1.93
C9orf72-205ENST00000488117 USO1O60763 962 aaKnown RBP2.97□□□□□ -1.93
C9orf72-205ENST00000488117 GOLGA8HP0CJ92 632 aa2.97□□□□□ -1.93
C9orf72-205ENST00000488117 GCFC2P16383 781 aaKnown RBP2.97□□□□□ -1.93
C9orf72-205ENST00000488117 CCT6AP40227 531 aaKnown RBP2.97□□□□□ -1.93
C9orf72-205ENST00000488117 SARSP49591 514 aaKnown RBP2.97□□□□□ -1.93
C9orf72-205ENST00000488117 COPB1P53618 953 aaKnown RBP2.97□□□□□ -1.93
C9orf72-205ENST00000488117 MDM2Q00987 491 aaPredicted RBP2.97□□□□□ -1.93
C9orf72-205ENST00000488117 BMS1Q14692 1282 aaKnown RBP2.97□□□□□ -1.93
C9orf72-205ENST00000488117 KCNB1Q14721 858 aa2.97□□□□□ -1.93
C9orf72-205ENST00000488117 ARID5BQ14865 1188 aa2.97□□□□□ -1.93
C9orf72-205ENST00000488117 NCAPHQ15003 741 aa2.97□□□□□ -1.93
C9orf72-205ENST00000488117 KIF4BQ2VIQ3 1234 aa2.97□□□□□ -1.93
C9orf72-205ENST00000488117 GOLGA6L1Q8N7Z2 621 aa2.97□□□□□ -1.93
C9orf72-205ENST00000488117 CAGE1Q8TC20 777 aa2.97□□□□□ -1.93
C9orf72-205ENST00000488117 DCAF4Q8WV16 495 aa2.97□□□□□ -1.93
C9orf72-205ENST00000488117 GOLGA1Q92805 767 aa2.97□□□□□ -1.93
C9orf72-205ENST00000488117 MASTLQ96GX5 879 aa2.97□□□□□ -1.93
C9orf72-205ENST00000488117 GPR101Q96P66 508 aaPredicted RBP2.97□□□□□ -1.93
C9orf72-205ENST00000488117 PIGSQ96S52 555 aa2.97□□□□□ -1.93
C9orf72-205ENST00000488117 TSGA10Q9BZW7 698 aa2.97□□□□□ -1.93
C9orf72-205ENST00000488117 NT5C3AQ9H0P0 336 aa2.97□□□□□ -1.93
C9orf72-205ENST00000488117 ATP6V0A2Q9Y487 856 aa2.97□□□□□ -1.93
C9orf72-205ENST00000488117 FRMPD2Q68DX3 1309 aaPredicted RBP2.97□□□□□ -1.93
C9orf72-205ENST00000488117 LAMB1P07942 1786 aa2.97□□□□□ -1.93
C9orf72-205ENST00000488117 PNMA6FA0A0J9YX94 578 aa2.97□□□□□ -1.93
C9orf72-205ENST00000488117 A0A1B0GTH6 734 aa2.97□□□□□ -1.93
C9orf72-205ENST00000488117 FAM205CA6NFA0 338 aa2.97□□□□□ -1.93
C9orf72-205ENST00000488117 TRIM37O94972 964 aa2.97□□□□□ -1.93
C9orf72-205ENST00000488117 SSBP05455 408 aaKnown RBP eCLIP2.97□□□□□ -1.93
C9orf72-205ENST00000488117 GYS1P13807 737 aa2.97□□□□□ -1.93
C9orf72-205ENST00000488117 TRIM21P19474 475 aaKnown RBP2.97□□□□□ -1.93
C9orf72-205ENST00000488117 TXKP42681 527 aa2.97□□□□□ -1.93
C9orf72-205ENST00000488117 ADKP55263 362 aaKnown RBP2.97□□□□□ -1.93
C9orf72-205ENST00000488117 ETF1P62495 437 aaKnown RBP2.97□□□□□ -1.93
C9orf72-205ENST00000488117 SEPT2Q15019 361 aa2.97□□□□□ -1.93
C9orf72-205ENST00000488117 KARSQ15046 597 aaKnown RBP2.97□□□□□ -1.93
C9orf72-205ENST00000488117 HAUS3Q68CZ6 603 aa2.97□□□□□ -1.93
C9orf72-205ENST00000488117 NYAP1Q6ZVC0 841 aa2.97□□□□□ -1.93
C9orf72-205ENST00000488117 SMIM5Q71RC9 77 aa2.97□□□□□ -1.93
C9orf72-205ENST00000488117 C2CD5Q86YS7 1000 aa2.97□□□□□ -1.93
C9orf72-205ENST00000488117 CCDC65Q8IXS2 484 aa2.97□□□□□ -1.93
C9orf72-205ENST00000488117 CSGALNACT2Q8N6G5 542 aa2.97□□□□□ -1.93
C9orf72-205ENST00000488117 VPS16Q9H269 839 aa2.97□□□□□ -1.93
C9orf72-205ENST00000488117 SAMSN1Q9NSI8 373 aaKnown RBP2.97□□□□□ -1.93
C9orf72-205ENST00000488117 TAB2Q9NYJ8 693 aa2.97□□□□□ -1.93
C9orf72-205ENST00000488117 TCEAL9Q9UHQ7 104 aa2.97□□□□□ -1.93
C9orf72-205ENST00000488117 LUC7L2Q9Y383 392 aaKnown RBP2.97□□□□□ -1.93
C9orf72-205ENST00000488117 TACC3Q9Y6A5 838 aa2.97□□□□□ -1.93
C9orf72-205ENST00000488117 ITIH6Q6UXX5 1313 aa2.97□□□□□ -1.93
C9orf72-205ENST00000488117 MYO3BQ8WXR4 1341 aa2.97□□□□□ -1.93
C9orf72-205ENST00000488117 AKAP11Q9UKA4 1901 aa2.97□□□□□ -1.93
C9orf72-205ENST00000488117 ESYT2A0FGR8 921 aa2.96□□□□□ -1.93
C9orf72-205ENST00000488117 PALM3A6NDB9 673 aaPredicted RBP2.96□□□□□ -1.93
C9orf72-205ENST00000488117 UBE2Q2LH0YL09 131 aa2.96□□□□□ -1.93
C9orf72-205ENST00000488117 CTIFO43310 598 aaKnown RBP2.96□□□□□ -1.93
C9orf72-205ENST00000488117 EIF3JO75822 258 aaKnown RBP2.96□□□□□ -1.93
C9orf72-205ENST00000488117 DNM2P50570 870 aa2.96□□□□□ -1.93
C9orf72-205ENST00000488117 PPP2R3AQ06190 1150 aa2.96□□□□□ -1.93
C9orf72-205ENST00000488117 CKAP4Q07065 602 aaKnown RBP2.96□□□□□ -1.93
C9orf72-205ENST00000488117 RBL2Q08999 1139 aa2.96□□□□□ -1.93
C9orf72-205ENST00000488117 FUT2Q10981 343 aa2.96□□□□□ -1.93
C9orf72-205ENST00000488117 PSMD2Q13200 908 aa2.96□□□□□ -1.93
C9orf72-205ENST00000488117 CUL4BQ13620 913 aa2.96□□□□□ -1.93
C9orf72-205ENST00000488117 CHD4Q14839 1912 aa2.96□□□□□ -1.93
C9orf72-205ENST00000488117 TNIP1Q15025 636 aa2.96□□□□□ -1.93
C9orf72-205ENST00000488117 COL24A1Q17RW2 1714 aa2.96□□□□□ -1.93
C9orf72-205ENST00000488117 KMT5BQ4FZB7 885 aa2.96□□□□□ -1.93
C9orf72-205ENST00000488117 CCDC40Q4G0X9 1142 aa2.96□□□□□ -1.93
C9orf72-205ENST00000488117 TCP11X2Q5H9J9 407 aa2.96□□□□□ -1.93
C9orf72-205ENST00000488117 RBM26Q5T8P6 1007 aaKnown RBP2.96□□□□□ -1.93
C9orf72-205ENST00000488117 ZNF772Q68DY9 489 aaPredicted RBP2.96□□□□□ -1.93
C9orf72-205ENST00000488117 SLFN12Q8IYM2 578 aa2.96□□□□□ -1.93
C9orf72-205ENST00000488117 STAG2Q8N3U4 1231 aa2.96□□□□□ -1.93
C9orf72-205ENST00000488117 RASGRP4Q8TDF6 673 aa2.96□□□□□ -1.93
C9orf72-205ENST00000488117 STAMQ92783 540 aa2.96□□□□□ -1.93
C9orf72-205ENST00000488117 PLIN2Q99541 437 aa2.96□□□□□ -1.93
C9orf72-205ENST00000488117 NOC4LQ9BVI4 516 aaKnown RBP2.96□□□□□ -1.93
C9orf72-205ENST00000488117 CCSER1Q9C0I3 900 aa2.96□□□□□ -1.93
C9orf72-205ENST00000488117 SH2D4AQ9H788 454 aa2.96□□□□□ -1.93
C9orf72-205ENST00000488117 ARHGEF10LQ9HCE6 1279 aa2.96□□□□□ -1.93
C9orf72-205ENST00000488117 LIMA1Q9UHB6 759 aaKnown RBP2.96□□□□□ -1.93
C9orf72-205ENST00000488117 SERPINB13Q9UIV8 391 aa2.96□□□□□ -1.93
C9orf72-205ENST00000488117 DAGLAQ9Y4D2 1042 aa2.96□□□□□ -1.93
C9orf72-205ENST00000488117 BTAF1O14981 1849 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms