RNA–Protein interactions for RNA: ENST00000487894.5

HMG20B-212, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 1,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-212ENST00000487894 KCTD2Q14681 263 aa19.99■□□□□ 0.79
HMG20B-212ENST00000487894 SYDE2Q5VT97 1194 aa19.99■□□□□ 0.79
HMG20B-212ENST00000487894 OLFML2BQ68BL8 750 aa19.99■□□□□ 0.79
HMG20B-212ENST00000487894 CASC1Q6TDU7 716 aa19.99■□□□□ 0.79
HMG20B-212ENST00000487894 RALYLQ86SE5 291 aaKnown RBP19.99■□□□□ 0.79
HMG20B-212ENST00000487894 MB21D2Q8IYB1 491 aaPredicted RBP19.99■□□□□ 0.79
HMG20B-212ENST00000487894 NCOA7Q8NI08 942 aa19.99■□□□□ 0.79
HMG20B-212ENST00000487894 DEFB118Q96PH6 123 aa19.99■□□□□ 0.79
HMG20B-212ENST00000487894 RANBP17Q9H2T7 1088 aaKnown RBP19.99■□□□□ 0.79
HMG20B-212ENST00000487894 SLC27A2O14975 620 aa19.98■□□□□ 0.79
HMG20B-212ENST00000487894 SGPL1O95470 568 aa19.98■□□□□ 0.79
HMG20B-212ENST00000487894 PGK2P07205 417 aa19.98■□□□□ 0.79
HMG20B-212ENST00000487894 NECTIN1Q15223 517 aa19.98■□□□□ 0.79
HMG20B-212ENST00000487894 IFIT1BQ5T764 474 aaKnown RBP19.98■□□□□ 0.79
HMG20B-212ENST00000487894 CCDC174Q6PII3 467 aa19.98■□□□□ 0.79
HMG20B-212ENST00000487894 MAML3Q96JK9 1138 aa19.98■□□□□ 0.79
HMG20B-212ENST00000487894 AGBL1Q96MI9 1066 aa19.98■□□□□ 0.79
HMG20B-212ENST00000487894 SLC5A4Q9NY91 659 aa19.98■□□□□ 0.79
HMG20B-212ENST00000487894 GOLGA8HP0CJ92 632 aa19.97■□□□□ 0.79
HMG20B-212ENST00000487894 CCND3P30281 292 aaPredicted RBP19.97■□□□□ 0.79
HMG20B-212ENST00000487894 CYP2C19P33261 490 aa19.97■□□□□ 0.79
HMG20B-212ENST00000487894 ANTXR2P58335 489 aa19.97■□□□□ 0.79
HMG20B-212ENST00000487894 ZNF792Q3KQV3 632 aa19.97■□□□□ 0.79
HMG20B-212ENST00000487894 GPATCH4Q5T3I0 446 aaKnown RBP19.97■□□□□ 0.79
HMG20B-212ENST00000487894 MFSD14CQ5VZR4 134 aa19.97■□□□□ 0.79
HMG20B-212ENST00000487894 CREB3L3Q68CJ9 461 aa19.97■□□□□ 0.79
HMG20B-212ENST00000487894 CHST13Q8NET6 341 aa19.97■□□□□ 0.79
HMG20B-212ENST00000487894 CRISPLD2Q9H0B8 497 aa19.97■□□□□ 0.79
HMG20B-212ENST00000487894 HOMER2Q9NSB8 354 aa19.97■□□□□ 0.79
HMG20B-212ENST00000487894 RNF216Q9NWF9 866 aaPredicted RBP19.97■□□□□ 0.79
HMG20B-212ENST00000487894 FBXO40Q9UH90 709 aa19.97■□□□□ 0.79
HMG20B-212ENST00000487894 TAL1P17542 331 aaPredicted RBP19.96■□□□□ 0.79
HMG20B-212ENST00000487894 CHST3Q7LGC8 479 aa19.96■□□□□ 0.79
HMG20B-212ENST00000487894 RNF146Q9NTX7 359 aa19.96■□□□□ 0.79
HMG20B-212ENST00000487894 DNAJC25-GNG10A0A024R161 153 aa19.95■□□□□ 0.78
HMG20B-212ENST00000487894 IFIT3O14879 490 aaKnown RBP19.95■□□□□ 0.78
HMG20B-212ENST00000487894 ICAM1P05362 532 aa19.95■□□□□ 0.78
HMG20B-212ENST00000487894 CYBAP13498 195 aa19.95■□□□□ 0.78
HMG20B-212ENST00000487894 MAPK8IP2Q13387 824 aaPredicted RBP19.95■□□□□ 0.78
HMG20B-212ENST00000487894 COL9A3Q14050 684 aaPredicted RBP19.95■□□□□ 0.78
HMG20B-212ENST00000487894 TKFCQ3LXA3 575 aa19.95■□□□□ 0.78
HMG20B-212ENST00000487894 ASPRV1Q53RT3 343 aa19.95■□□□□ 0.78
HMG20B-212ENST00000487894 UBE2Q1Q7Z7E8 422 aa19.95■□□□□ 0.78
HMG20B-212ENST00000487894 TRPV1Q8NER1 839 aa19.95■□□□□ 0.78
HMG20B-212ENST00000487894 CPVLQ9H3G5 476 aa19.95■□□□□ 0.78
HMG20B-212ENST00000487894 ACAD9Q9H845 621 aa19.95■□□□□ 0.78
HMG20B-212ENST00000487894 SENP2Q9HC62 589 aa19.95■□□□□ 0.78
HMG20B-212ENST00000487894 CCPG1Q9ULG6 757 aa19.95■□□□□ 0.78
HMG20B-212ENST00000487894 DIS3Q9Y2L1 958 aaKnown RBP19.95■□□□□ 0.78
HMG20B-212ENST00000487894 ALAS1P13196 640 aa19.94■□□□□ 0.78
HMG20B-212ENST00000487894 BAZ2BQ9UIF8 2168 aaKnown RBP19.93■□□□□ 0.78
HMG20B-212ENST00000487894 TFRCP02786 760 aaKnown RBP19.93■□□□□ 0.78
HMG20B-212ENST00000487894 PARP1P09874 1014 aaKnown RBP19.93■□□□□ 0.78
HMG20B-212ENST00000487894 CAPN2P17655 700 aa19.93■□□□□ 0.78
HMG20B-212ENST00000487894 WTAPQ15007 396 aa19.93■□□□□ 0.78
HMG20B-212ENST00000487894 SART3Q15020 963 aaKnown RBP19.93■□□□□ 0.78
HMG20B-212ENST00000487894 MUM1L1Q5H9M0 696 aa19.93■□□□□ 0.78
HMG20B-212ENST00000487894 ANKRD35Q8N283 1001 aa19.93■□□□□ 0.78
HMG20B-212ENST00000487894 DDX11Q96FC9 970 aa19.93■□□□□ 0.78
HMG20B-212ENST00000487894 FGD4Q96M96 766 aa19.93■□□□□ 0.78
HMG20B-212ENST00000487894 TRERF1Q96PN7 1200 aa19.93■□□□□ 0.78
HMG20B-212ENST00000487894 UBA5Q9GZZ9 404 aa19.93■□□□□ 0.78
HMG20B-212ENST00000487894 A1CFQ9NQ94 594 aaKnown RBP19.93■□□□□ 0.78
HMG20B-212ENST00000487894 ERICH2A1L162 156 aa19.92■□□□□ 0.78
HMG20B-212ENST00000487894 FARP2O94887 1054 aaPredicted RBP19.92■□□□□ 0.78
HMG20B-212ENST00000487894 TMEM67Q5HYA8 995 aa19.92■□□□□ 0.78
HMG20B-212ENST00000487894 LHX8Q68G74 356 aa19.92■□□□□ 0.78
HMG20B-212ENST00000487894 IGDCC4Q8TDY8 1250 aa19.92■□□□□ 0.78
HMG20B-212ENST00000487894 TINF2Q9BSI4 451 aa19.92■□□□□ 0.78
HMG20B-212ENST00000487894 OGDHLQ9ULD0 1010 aa19.92■□□□□ 0.78
HMG20B-212ENST00000487894 WDR19Q8NEZ3 1342 aa19.92■□□□□ 0.78
HMG20B-212ENST00000487894 PRC1O43663 620 aa19.91■□□□□ 0.78
HMG20B-212ENST00000487894 RNF20Q5VTR2 975 aa19.91■□□□□ 0.78
HMG20B-212ENST00000487894 STAG2Q8N3U4 1231 aa19.91■□□□□ 0.78
HMG20B-212ENST00000487894 MTA3Q9BTC8 594 aa19.91■□□□□ 0.78
HMG20B-212ENST00000487894 LY9Q9HBG7 655 aa19.91■□□□□ 0.78
HMG20B-212ENST00000487894 MAD2L2Q9UI95 211 aa19.91■□□□□ 0.78
HMG20B-212ENST00000487894 MCM5P33992 734 aa19.9■□□□□ 0.78
HMG20B-212ENST00000487894 MNX1P50219 401 aaPredicted RBP19.9■□□□□ 0.78
HMG20B-212ENST00000487894 GRM4Q14833 912 aa19.9■□□□□ 0.78
HMG20B-212ENST00000487894 CDC37Q16543 378 aaPredicted RBP19.9■□□□□ 0.78
HMG20B-212ENST00000487894 PRAMEF19Q5SWL8 479 aa19.9■□□□□ 0.78
HMG20B-212ENST00000487894 ZNF467Q7Z7K2 595 aaPredicted RBP19.9■□□□□ 0.78
HMG20B-212ENST00000487894 ADGRF4Q8IZF3 695 aa19.9■□□□□ 0.78
HMG20B-212ENST00000487894 FAM133AQ8N9E0 248 aa19.9■□□□□ 0.78
HMG20B-212ENST00000487894 ANKLE1Q8NAG6 615 aa19.9■□□□□ 0.78
HMG20B-212ENST00000487894 GPHNQ9NQX3 736 aaPredicted RBP19.9■□□□□ 0.78
HMG20B-212ENST00000487894 DDX20Q9UHI6 824 aaKnown RBP19.9■□□□□ 0.78
HMG20B-212ENST00000487894 PFASO15067 1338 aa19.9■□□□□ 0.78
HMG20B-212ENST00000487894 PALM3A6NDB9 673 aaPredicted RBP19.89■□□□□ 0.77
HMG20B-212ENST00000487894 SH2B2O14492 632 aaPredicted RBP19.89■□□□□ 0.77
HMG20B-212ENST00000487894 CNGA1P29973 690 aa19.89■□□□□ 0.77
HMG20B-212ENST00000487894 CNTN2Q02246 1040 aa19.89■□□□□ 0.77
HMG20B-212ENST00000487894 TROAPQ12815 778 aa19.89■□□□□ 0.77
HMG20B-212ENST00000487894 MAMDC4Q6UXC1 1216 aa19.89■□□□□ 0.77
HMG20B-212ENST00000487894 RASEFQ8IZ41 740 aa19.89■□□□□ 0.77
HMG20B-212ENST00000487894 MSL3Q8N5Y2 521 aaKnown RBP19.89■□□□□ 0.77
HMG20B-212ENST00000487894 DIS3LQ8TF46 1054 aaKnown RBP19.89■□□□□ 0.77
HMG20B-212ENST00000487894 SYNGAP1Q96PV0 1343 aa19.89■□□□□ 0.77
HMG20B-212ENST00000487894 CYP39A1Q9NYL5 469 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms