RNA–Protein interactions for RNA: ENST00000487701.1

SEC22C-215, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22C, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-215ENST00000487701 SNAP23O00161 211 aa8.05□□□□□ -1.12
SEC22C-215ENST00000487701 ECE2O60344 883 aa8.05□□□□□ -1.12
SEC22C-215ENST00000487701 TAF5LO75529 589 aa8.05□□□□□ -1.12
SEC22C-215ENST00000487701 PDGFAP04085 211 aa8.05□□□□□ -1.12
SEC22C-215ENST00000487701 RPLP1P05386 114 aaKnown RBP8.05□□□□□ -1.12
SEC22C-215ENST00000487701 ELNP15502 786 aa8.05□□□□□ -1.12
SEC22C-215ENST00000487701 EIF6P56537 245 aaKnown RBP8.05□□□□□ -1.12
SEC22C-215ENST00000487701 CXCL9Q07325 125 aa8.05□□□□□ -1.12
SEC22C-215ENST00000487701 HYAL2Q12891 473 aa8.05□□□□□ -1.12
SEC22C-215ENST00000487701 GRIK5Q16478 980 aa8.05□□□□□ -1.12
SEC22C-215ENST00000487701 TAF7LQ5H9L4 462 aa8.05□□□□□ -1.12
SEC22C-215ENST00000487701 PDE12Q6L8Q7 609 aaKnown RBP8.05□□□□□ -1.12
SEC22C-215ENST00000487701 TXNRD3Q86VQ6 643 aa8.05□□□□□ -1.12
SEC22C-215ENST00000487701 DZIP1LQ8IYY4 767 aaKnown RBP8.05□□□□□ -1.12
SEC22C-215ENST00000487701 GPC2Q8N158 579 aa8.05□□□□□ -1.12
SEC22C-215ENST00000487701 PANK1Q8TE04 598 aa8.05□□□□□ -1.12
SEC22C-215ENST00000487701 SPACA7Q96KW9 195 aa8.05□□□□□ -1.12
SEC22C-215ENST00000487701 EYA3Q99504 573 aa8.05□□□□□ -1.12
SEC22C-215ENST00000487701 ELP3Q9H9T3 547 aa8.05□□□□□ -1.12
SEC22C-215ENST00000487701 KCNQ5Q9NR82 932 aa8.05□□□□□ -1.12
SEC22C-215ENST00000487701 TMEM63CQ9P1W3 806 aa8.05□□□□□ -1.12
SEC22C-215ENST00000487701 RCAN3Q9UKA8 241 aa8.05□□□□□ -1.12
SEC22C-215ENST00000487701 ZNRF3Q9ULT6 936 aa8.05□□□□□ -1.12
SEC22C-215ENST00000487701 ZNF804BA4D1E1 1349 aa8.04□□□□□ -1.12
SEC22C-215ENST00000487701 A6NHS1 94 aa8.04□□□□□ -1.12
SEC22C-215ENST00000487701 PLIN1O60240 522 aa8.04□□□□□ -1.12
SEC22C-215ENST00000487701 RAD17O75943 681 aa8.04□□□□□ -1.12
SEC22C-215ENST00000487701 FAM13AO94988 1023 aa8.04□□□□□ -1.12
SEC22C-215ENST00000487701 GNAI3P08754 354 aa8.04□□□□□ -1.12
SEC22C-215ENST00000487701 HOXD8P13378 290 aaPredicted RBP8.04□□□□□ -1.12
SEC22C-215ENST00000487701 VEGFAP15692 232 aaPredicted RBP8.04□□□□□ -1.12
SEC22C-215ENST00000487701 MZF1P28698 734 aaPredicted RBP8.04□□□□□ -1.12
SEC22C-215ENST00000487701 GATA4P43694 442 aa8.04□□□□□ -1.12
SEC22C-215ENST00000487701 C1QTNF8P60827 252 aa8.04□□□□□ -1.12
SEC22C-215ENST00000487701 LRRC24Q50LG9 513 aa8.04□□□□□ -1.12
SEC22C-215ENST00000487701 LDHAL6AQ6ZMR3 332 aa8.04□□□□□ -1.12
SEC22C-215ENST00000487701 NCAPG2Q86XI2 1143 aa8.04□□□□□ -1.12
SEC22C-215ENST00000487701 FTSJ3Q8IY81 847 aaKnown RBP8.04□□□□□ -1.12
SEC22C-215ENST00000487701 FMR1NBQ8N0W7 255 aaPredicted RBP8.04□□□□□ -1.12
SEC22C-215ENST00000487701 VGLL2Q8N8G2 317 aa8.04□□□□□ -1.12
SEC22C-215ENST00000487701 RETREG2Q8NC44 543 aa8.04□□□□□ -1.12
SEC22C-215ENST00000487701 TTC9Q92623 222 aa8.04□□□□□ -1.12
SEC22C-215ENST00000487701 ANKRD2Q9GZV1 360 aa8.04□□□□□ -1.12
SEC22C-215ENST00000487701 CNNM1Q9NRU3 951 aa8.04□□□□□ -1.12
SEC22C-215ENST00000487701 RIPOR2Q9Y4F9 1068 aa8.04□□□□□ -1.12
SEC22C-215ENST00000487701 MYO5AQ9Y4I1 1855 aaKnown RBP8.04□□□□□ -1.12
SEC22C-215ENST00000487701 PSMD14O00487 310 aa8.03□□□□□ -1.12
SEC22C-215ENST00000487701 CYP2E1P05181 493 aaPredicted RBP8.03□□□□□ -1.12
SEC22C-215ENST00000487701 GMPSP49915 693 aaPredicted RBP8.03□□□□□ -1.12
SEC22C-215ENST00000487701 PTPN12Q05209 780 aaKnown RBP8.03□□□□□ -1.12
SEC22C-215ENST00000487701 COL13A1Q5TAT6 717 aaPredicted RBP8.03□□□□□ -1.12
SEC22C-215ENST00000487701 CIAPIN1Q6FI81 312 aa8.03□□□□□ -1.12
SEC22C-215ENST00000487701 ITPRIPQ8IWB1 547 aa8.03□□□□□ -1.12
SEC22C-215ENST00000487701 ZC3H12CQ9C0D7 883 aaKnown RBP8.03□□□□□ -1.12
SEC22C-215ENST00000487701 TAF1DQ9H5J8 278 aaPredicted RBP8.03□□□□□ -1.12
SEC22C-215ENST00000487701 KANSL3Q9P2N6 904 aa8.03□□□□□ -1.12
SEC22C-215ENST00000487701 POLIQ9UNA4 740 aa8.03□□□□□ -1.12
SEC22C-215ENST00000487701 LEMD3Q9Y2U8 911 aa8.03□□□□□ -1.12
SEC22C-215ENST00000487701 ZNF609O15014 1411 aa8.03□□□□□ -1.12
SEC22C-215ENST00000487701 MROH5Q6ZUA9 1318 aa8.03□□□□□ -1.12
SEC22C-215ENST00000487701 AKAP11Q9UKA4 1901 aa8.02□□□□□ -1.13
SEC22C-215ENST00000487701 SHTN1A0MZ66 631 aa8.02□□□□□ -1.13
SEC22C-215ENST00000487701 IQCA1LA6NCM1 817 aa8.02□□□□□ -1.13
SEC22C-215ENST00000487701 C9orf172C9J069 976 aa8.02□□□□□ -1.13
SEC22C-215ENST00000487701 TOMM70O94826 608 aa8.02□□□□□ -1.13
SEC22C-215ENST00000487701 GNAI2P04899 355 aa8.02□□□□□ -1.13
SEC22C-215ENST00000487701 EPHX2P34913 555 aa8.02□□□□□ -1.13
SEC22C-215ENST00000487701 EPS15P42566 896 aa8.02□□□□□ -1.13
SEC22C-215ENST00000487701 KCNJ4P48050 445 aa8.02□□□□□ -1.13
SEC22C-215ENST00000487701 ATP11AP98196 1134 aa8.02□□□□□ -1.13
SEC22C-215ENST00000487701 MTX1Q13505 466 aa8.02□□□□□ -1.13
SEC22C-215ENST00000487701 C20orf194Q5TEA3 1177 aa8.02□□□□□ -1.13
SEC22C-215ENST00000487701 SHISA2Q6UWI4 295 aa8.02□□□□□ -1.13
SEC22C-215ENST00000487701 ATG9AQ7Z3C6 839 aa8.02□□□□□ -1.13
SEC22C-215ENST00000487701 SIL1Q9H173 461 aa8.02□□□□□ -1.13
SEC22C-215ENST00000487701 GPRC5DQ9NZD1 345 aa8.02□□□□□ -1.13
SEC22C-215ENST00000487701 TRIM33Q9UPN9 1127 aa8.02□□□□□ -1.13
SEC22C-215ENST00000487701 PA2G4Q9UQ80 394 aaKnown RBP8.02□□□□□ -1.13
SEC22C-215ENST00000487701 PNMA6EA0A0J9YXQ4 647 aa8.01□□□□□ -1.13
SEC22C-215ENST00000487701 EYA2O00167 538 aa8.01□□□□□ -1.13
SEC22C-215ENST00000487701 SRGAP3O43295 1099 aa8.01□□□□□ -1.13
SEC22C-215ENST00000487701 SERPINB4P48594 390 aa8.01□□□□□ -1.13
SEC22C-215ENST00000487701 DOC2BQ14184 412 aa8.01□□□□□ -1.13
SEC22C-215ENST00000487701 TNIP1Q15025 636 aa8.01□□□□□ -1.13
SEC22C-215ENST00000487701 METTL24Q5JXM2 366 aa8.01□□□□□ -1.13
SEC22C-215ENST00000487701 CEP135Q66GS9 1140 aa8.01□□□□□ -1.13
SEC22C-215ENST00000487701 C15orf52Q6ZUT6 534 aaKnown RBP8.01□□□□□ -1.13
SEC22C-215ENST00000487701 C16orf71Q8IYS4 520 aaPredicted RBP8.01□□□□□ -1.13
SEC22C-215ENST00000487701 DTWD1Q8N5C7 304 aa8.01□□□□□ -1.13
SEC22C-215ENST00000487701 IL22RA1Q8N6P7 574 aa8.01□□□□□ -1.13
SEC22C-215ENST00000487701 MXD3Q9BW11 206 aa8.01□□□□□ -1.13
SEC22C-215ENST00000487701 COA1Q9GZY4 146 aa8.01□□□□□ -1.13
SEC22C-215ENST00000487701 COPRSQ9NQ92 184 aa8.01□□□□□ -1.13
SEC22C-215ENST00000487701 HACL1Q9UJ83 578 aa8.01□□□□□ -1.13
SEC22C-215ENST00000487701 HDAC5Q9UQL6 1122 aa8.01□□□□□ -1.13
SEC22C-215ENST00000487701 MYH2Q9UKX2 1941 aa8.01□□□□□ -1.13
SEC22C-215ENST00000487701 H3BRB1 525 aa8□□□□□ -1.13
SEC22C-215ENST00000487701 SMNDC1O75940 238 aaKnown RBP eCLIP8□□□□□ -1.13
SEC22C-215ENST00000487701 CIAO1O76071 339 aa8□□□□□ -1.13
SEC22C-215ENST00000487701 VIL1P09327 827 aaKnown RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms