RNA–Protein interactions for RNA: ENST00000487689.1

UBR3-211, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 3

Gene UBR3, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-211ENST00000487689 FERD3LQ96RJ6 166 aa6.66□□□□□ -1.34
UBR3-211ENST00000487689 G6PC3Q9BUM1 346 aa6.66□□□□□ -1.34
UBR3-211ENST00000487689 GFOD1Q9NXC2 390 aa6.66□□□□□ -1.34
UBR3-211ENST00000487689 ADAMTS1Q9UHI8 967 aa6.66□□□□□ -1.34
UBR3-211ENST00000487689 A0A1W2PQJ5 194 aa6.65□□□□□ -1.34
UBR3-211ENST00000487689 ZC3H12DA2A288 527 aaKnown RBP6.65□□□□□ -1.34
UBR3-211ENST00000487689 ZNF76P36508 570 aa6.65□□□□□ -1.34
UBR3-211ENST00000487689 SNW1Q13573 536 aaKnown RBP6.65□□□□□ -1.34
UBR3-211ENST00000487689 NOL9Q5SY16 702 aaKnown RBP6.65□□□□□ -1.34
UBR3-211ENST00000487689 FBXW10Q5XX13 1052 aa6.65□□□□□ -1.34
UBR3-211ENST00000487689 BDH2Q9BUT1 245 aa6.65□□□□□ -1.34
UBR3-211ENST00000487689 PRR13Q9NZ81 148 aa6.65□□□□□ -1.34
UBR3-211ENST00000487689 ZNF281Q9Y2X9 895 aa6.65□□□□□ -1.34
UBR3-211ENST00000487689 NISCHQ9Y2I1 1504 aa6.65□□□□□ -1.35
UBR3-211ENST00000487689 TNFRSF10CO14798 259 aa6.64□□□□□ -1.35
UBR3-211ENST00000487689 N4BP3O15049 544 aa6.64□□□□□ -1.35
UBR3-211ENST00000487689 BMP8BP34820 402 aa6.64□□□□□ -1.35
UBR3-211ENST00000487689 AUHQ13825 339 aaKnown RBP6.64□□□□□ -1.35
UBR3-211ENST00000487689 MRPL58Q14197 206 aaKnown RBP6.64□□□□□ -1.35
UBR3-211ENST00000487689 BBS9Q3SYG4 887 aa6.64□□□□□ -1.35
UBR3-211ENST00000487689 JAMLQ86YT9 394 aa6.64□□□□□ -1.35
UBR3-211ENST00000487689 SLITRK4Q8IW52 837 aa6.64□□□□□ -1.35
UBR3-211ENST00000487689 SMARCC1Q92922 1105 aaPredicted RBP6.64□□□□□ -1.35
UBR3-211ENST00000487689 CNTD2Q9H8S5 307 aa6.64□□□□□ -1.35
UBR3-211ENST00000487689 LUC7LQ9NQ29 371 aaKnown RBP6.64□□□□□ -1.35
UBR3-211ENST00000487689 GPR55Q9Y2T6 319 aaPredicted RBP6.64□□□□□ -1.35
UBR3-211ENST00000487689 A0A1W2PQ45 241 aaPredicted RBP6.63□□□□□ -1.35
UBR3-211ENST00000487689 A0A1W2PQY0 241 aa6.63□□□□□ -1.35
UBR3-211ENST00000487689 TMEM82A0PJX8 343 aa6.63□□□□□ -1.35
UBR3-211ENST00000487689 ZBTB7CA1YPR0 619 aa6.63□□□□□ -1.35
UBR3-211ENST00000487689 MEIS3P2A8K0S8 358 aa6.63□□□□□ -1.35
UBR3-211ENST00000487689 GSNP06396 782 aa6.63□□□□□ -1.35
UBR3-211ENST00000487689 CYP4F8P98187 520 aa6.63□□□□□ -1.35
UBR3-211ENST00000487689 FRMD5Q7Z6J6 570 aa6.63□□□□□ -1.35
UBR3-211ENST00000487689 USP48Q86UV5 1035 aa6.63□□□□□ -1.35
UBR3-211ENST00000487689 EAF1Q96JC9 268 aaPredicted RBP6.63□□□□□ -1.35
UBR3-211ENST00000487689 FAM86C2PA6NEL3 165 aa6.62□□□□□ -1.35
UBR3-211ENST00000487689 NOTOA8MTQ0 251 aa6.62□□□□□ -1.35
UBR3-211ENST00000487689 IRS4O14654 1257 aaPredicted RBP6.62□□□□□ -1.35
UBR3-211ENST00000487689 EFEMP2O95967 443 aa6.62□□□□□ -1.35
UBR3-211ENST00000487689 PRKCAP17252 672 aa6.62□□□□□ -1.35
UBR3-211ENST00000487689 VIPR1P32241 457 aa6.62□□□□□ -1.35
UBR3-211ENST00000487689 NOP2P46087 812 aaKnown RBP6.62□□□□□ -1.35
UBR3-211ENST00000487689 RAB3GAP1Q15042 981 aa6.62□□□□□ -1.35
UBR3-211ENST00000487689 INTS3Q68E01 1043 aaKnown RBP6.62□□□□□ -1.35
UBR3-211ENST00000487689 CNKSR3Q6P9H4 555 aa6.62□□□□□ -1.35
UBR3-211ENST00000487689 TMEM192Q8IY95 271 aa6.62□□□□□ -1.35
UBR3-211ENST00000487689 TMEFF1Q8IYR6 380 aa6.62□□□□□ -1.35
UBR3-211ENST00000487689 C7orf61Q8IZ16 206 aa6.62□□□□□ -1.35
UBR3-211ENST00000487689 NUP43Q8NFH3 380 aa6.62□□□□□ -1.35
UBR3-211ENST00000487689 RNF34Q969K3 372 aa6.62□□□□□ -1.35
UBR3-211ENST00000487689 SUCOQ9UBS9 1254 aaKnown RBP6.62□□□□□ -1.35
UBR3-211ENST00000487689 MYRFQ9Y2G1 1151 aa6.62□□□□□ -1.35
UBR3-211ENST00000487689 FADS2P1A8MWK0 482 aa6.61□□□□□ -1.35
UBR3-211ENST00000487689 VAV1P15498 845 aa6.61□□□□□ -1.35
UBR3-211ENST00000487689 CDR1P51861 262 aa6.61□□□□□ -1.35
UBR3-211ENST00000487689 HSF5Q4G112 596 aaPredicted RBP6.61□□□□□ -1.35
UBR3-211ENST00000487689 TMCO4Q5TGY1 634 aa6.61□□□□□ -1.35
UBR3-211ENST00000487689 HLA-DQA1Q5Y7H0 255 aa6.61□□□□□ -1.35
UBR3-211ENST00000487689 ZPBP2Q6X784 338 aa6.61□□□□□ -1.35
UBR3-211ENST00000487689 CRBNQ96SW2 442 aa6.61□□□□□ -1.35
UBR3-211ENST00000487689 SLC9A7Q96T83 725 aa6.61□□□□□ -1.35
UBR3-211ENST00000487689 GPR20Q99678 358 aa6.61□□□□□ -1.35
UBR3-211ENST00000487689 TM9SF2Q99805 663 aa6.61□□□□□ -1.35
UBR3-211ENST00000487689 ANTXR1Q9H6X2 564 aa6.61□□□□□ -1.35
UBR3-211ENST00000487689 SUV39H1O43463 412 aa6.6□□□□□ -1.35
UBR3-211ENST00000487689 ZNF205O95201 554 aa6.6□□□□□ -1.35
UBR3-211ENST00000487689 GSTM1P09488 218 aa6.6□□□□□ -1.35
UBR3-211ENST00000487689 ERVFRD-1P60508 538 aa6.6□□□□□ -1.35
UBR3-211ENST00000487689 RTP5Q14D33 572 aa6.6□□□□□ -1.35
UBR3-211ENST00000487689 TMC6Q7Z403 805 aa6.6□□□□□ -1.35
UBR3-211ENST00000487689 AP5S1Q9NUS5 200 aa6.6□□□□□ -1.35
UBR3-211ENST00000487689 ZNRF3Q9ULT6 936 aa6.6□□□□□ -1.35
UBR3-211ENST00000487689 NUDT19A8MXV4 375 aa6.59□□□□□ -1.35
UBR3-211ENST00000487689 AKAP8O43823 692 aaKnown RBP6.59□□□□□ -1.35
UBR3-211ENST00000487689 SDHBP21912 280 aa6.59□□□□□ -1.35
UBR3-211ENST00000487689 PMS1P54277 932 aaKnown RBP6.59□□□□□ -1.35
UBR3-211ENST00000487689 YBX1P67809 324 aaKnown RBP6.59□□□□□ -1.35
UBR3-211ENST00000487689 CRTC3Q6UUV7 619 aa6.59□□□□□ -1.35
UBR3-211ENST00000487689 HHIPL2Q6UWX4 724 aa6.59□□□□□ -1.35
UBR3-211ENST00000487689 FAM129CQ86XR2 697 aa6.59□□□□□ -1.35
UBR3-211ENST00000487689 LINC01356Q8N9X3 169 aa6.59□□□□□ -1.35
UBR3-211ENST00000487689 MZB1Q8WU39 189 aa6.59□□□□□ -1.35
UBR3-211ENST00000487689 PLCD4Q9BRC7 762 aa6.59□□□□□ -1.35
UBR3-211ENST00000487689 METTL5Q9NRN9 209 aaKnown RBP6.59□□□□□ -1.35
UBR3-211ENST00000487689 ERVK13-1Q9NX77 482 aa6.59□□□□□ -1.35
UBR3-211ENST00000487689 MINPP1Q9UNW1 487 aa6.59□□□□□ -1.35
UBR3-211ENST00000487689 SF3B6Q9Y3B4 125 aaKnown RBP6.59□□□□□ -1.35
UBR3-211ENST00000487689 PRICKLE3O43900 615 aaPredicted RBP6.58□□□□□ -1.36
UBR3-211ENST00000487689 ITGA4P13612 1032 aa6.58□□□□□ -1.36
UBR3-211ENST00000487689 ZNF16P17020 682 aaPredicted RBP6.58□□□□□ -1.36
UBR3-211ENST00000487689 PFKLP17858 780 aa6.58□□□□□ -1.36
UBR3-211ENST00000487689 NR1I3Q14994 352 aa6.58□□□□□ -1.36
UBR3-211ENST00000487689 TCEAL1Q15170 157 aa6.58□□□□□ -1.36
UBR3-211ENST00000487689 CYP2R1Q6VVX0 501 aa6.58□□□□□ -1.36
UBR3-211ENST00000487689 NLGN1Q8N2Q7 840 aa6.58□□□□□ -1.36
UBR3-211ENST00000487689 TBC1D8O95759 1140 aa6.57□□□□□ -1.36
UBR3-211ENST00000487689 RBM10P98175 930 aaKnown RBP6.57□□□□□ -1.36
UBR3-211ENST00000487689 KRTAP1-1Q07627 177 aa6.57□□□□□ -1.36
UBR3-211ENST00000487689 SLCO6A1Q86UG4 719 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms