RNA–Protein interactions for RNA: ENST00000487670.1

TOM1-214, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-214ENST00000487670 ATP8B2P98198 1209 aa19.72■□□□□ 0.75
TOM1-214ENST00000487670 SNRNP48Q6IEG0 339 aaKnown RBP19.72■□□□□ 0.75
TOM1-214ENST00000487670 CCDC174Q6PII3 467 aa19.72■□□□□ 0.75
TOM1-214ENST00000487670 SCLYQ96I15 445 aa19.72■□□□□ 0.75
TOM1-214ENST00000487670 HIPK3Q9H422 1215 aa19.72■□□□□ 0.75
TOM1-214ENST00000487670 CD320Q9NPF0 282 aa19.72■□□□□ 0.75
TOM1-214ENST00000487670 HCN4Q9Y3Q4 1203 aa19.72■□□□□ 0.75
TOM1-214ENST00000487670 TRIOO75962 3097 aa19.72■□□□□ 0.75
TOM1-214ENST00000487670 ERC2O15083 957 aa19.71■□□□□ 0.75
TOM1-214ENST00000487670 TLL1O43897 1013 aa19.71■□□□□ 0.75
TOM1-214ENST00000487670 GNASQ5JWF2 1037 aa19.71■□□□□ 0.75
TOM1-214ENST00000487670 CXCL17Q6UXB2 119 aa19.71■□□□□ 0.75
TOM1-214ENST00000487670 FRAT1Q92837 279 aaPredicted RBP19.71■□□□□ 0.75
TOM1-214ENST00000487670 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.71■□□□□ 0.75
TOM1-214ENST00000487670 TRPV6Q9H1D0 765 aa19.71■□□□□ 0.75
TOM1-214ENST00000487670 NOP58Q9Y2X3 529 aaKnown RBP19.71■□□□□ 0.75
TOM1-214ENST00000487670 SIP14410 1827 aa19.7■□□□□ 0.74
TOM1-214ENST00000487670 CDK8P49336 464 aa19.7■□□□□ 0.74
TOM1-214ENST00000487670 TMEM31Q5JXX7 168 aa19.7■□□□□ 0.74
TOM1-214ENST00000487670 TMEM63BQ5T3F8 832 aa19.7■□□□□ 0.74
TOM1-214ENST00000487670 SLC9C2Q5TAH2 1124 aa19.7■□□□□ 0.74
TOM1-214ENST00000487670 SLC43A3Q8NBI5 491 aa19.7■□□□□ 0.74
TOM1-214ENST00000487670 PCSK9Q8NBP7 692 aaKnown RBP19.7■□□□□ 0.74
TOM1-214ENST00000487670 NOC4LQ9BVI4 516 aaKnown RBP19.7■□□□□ 0.74
TOM1-214ENST00000487670 ATG2AQ2TAZ0 1938 aa19.7■□□□□ 0.74
TOM1-214ENST00000487670 TLR3O15455 904 aaKnown RBP19.69■□□□□ 0.74
TOM1-214ENST00000487670 B4GALT4O60513 344 aa19.69■□□□□ 0.74
TOM1-214ENST00000487670 TTLL4Q14679 1199 aa19.69■□□□□ 0.74
TOM1-214ENST00000487670 ARMCX2Q7L311 632 aa19.69■□□□□ 0.74
TOM1-214ENST00000487670 ALYREFQ86V81 257 aaKnown RBP19.69■□□□□ 0.74
TOM1-214ENST00000487670 TSPYL2Q9H2G4 693 aaPredicted RBP19.69■□□□□ 0.74
TOM1-214ENST00000487670 SWAP70Q9UH65 585 aa19.69■□□□□ 0.74
TOM1-214ENST00000487670 SCN10AQ9Y5Y9 1956 aa19.68■□□□□ 0.74
TOM1-214ENST00000487670 ZBBXA8MT70 800 aa19.68■□□□□ 0.74
TOM1-214ENST00000487670 CA3P07451 260 aa19.68■□□□□ 0.74
TOM1-214ENST00000487670 PSMC6P62333 389 aa19.68■□□□□ 0.74
TOM1-214ENST00000487670 AACSQ86V21 672 aa19.68■□□□□ 0.74
TOM1-214ENST00000487670 MSL3Q8N5Y2 521 aaKnown RBP19.68■□□□□ 0.74
TOM1-214ENST00000487670 DDX11Q96FC9 970 aa19.68■□□□□ 0.74
TOM1-214ENST00000487670 SH2D4AQ9H788 454 aa19.68■□□□□ 0.74
TOM1-214ENST00000487670 PCDHA11Q9Y5I1 949 aa19.68■□□□□ 0.74
TOM1-214ENST00000487670 SLC4A7Q9Y6M7 1214 aa19.68■□□□□ 0.74
TOM1-214ENST00000487670 MBD4O95243 580 aa19.67■□□□□ 0.74
TOM1-214ENST00000487670 CNTN2Q02246 1040 aa19.67■□□□□ 0.74
TOM1-214ENST00000487670 CCDC144CPQ8IYA2 1237 aa19.67■□□□□ 0.74
TOM1-214ENST00000487670 CPXCR1Q8N123 301 aa19.67■□□□□ 0.74
TOM1-214ENST00000487670 AGBL1Q96MI9 1066 aa19.67■□□□□ 0.74
TOM1-214ENST00000487670 TEX13BQ9BXU2 312 aa19.67■□□□□ 0.74
TOM1-214ENST00000487670 RAVER2Q9HCJ3 691 aaKnown RBP19.67■□□□□ 0.74
TOM1-214ENST00000487670 EXOC6BQ9Y2D4 811 aa19.67■□□□□ 0.74
TOM1-214ENST00000487670 ARIH1Q9Y4X5 557 aaPredicted RBP19.67■□□□□ 0.74
TOM1-214ENST00000487670 C12orf60Q5U649 245 aa19.66■□□□□ 0.74
TOM1-214ENST00000487670 C16orf86Q6ZW13 317 aa19.66■□□□□ 0.74
TOM1-214ENST00000487670 PPP1R13LQ8WUF5 828 aa19.66■□□□□ 0.74
TOM1-214ENST00000487670 SLF1Q9BQI6 1058 aa19.66■□□□□ 0.74
TOM1-214ENST00000487670 ABHD16BQ9H3Z7 469 aa19.66■□□□□ 0.74
TOM1-214ENST00000487670 IL1RAPL2Q9NP60 686 aa19.66■□□□□ 0.74
TOM1-214ENST00000487670 USP34Q70CQ2 3546 aa19.65■□□□□ 0.74
TOM1-214ENST00000487670 GOLIM4O00461 696 aa19.65■□□□□ 0.74
TOM1-214ENST00000487670 ATP2A2P16615 1042 aaKnown RBP19.65■□□□□ 0.74
TOM1-214ENST00000487670 ITGA7Q13683 1181 aa19.65■□□□□ 0.74
TOM1-214ENST00000487670 ZNF467Q7Z7K2 595 aaPredicted RBP19.65■□□□□ 0.74
TOM1-214ENST00000487670 DNAJC2Q99543 621 aaKnown RBP19.65■□□□□ 0.74
TOM1-214ENST00000487670 MTIF3Q9H2K0 278 aaKnown RBP19.65■□□□□ 0.74
TOM1-214ENST00000487670 GOPCQ9HD26 462 aa19.65■□□□□ 0.74
TOM1-214ENST00000487670 USP17L12C9JPN9 530 aa19.64■□□□□ 0.73
TOM1-214ENST00000487670 USP17L21D6R901 530 aa19.64■□□□□ 0.73
TOM1-214ENST00000487670 COPB2P35606 906 aa19.64■□□□□ 0.73
TOM1-214ENST00000487670 NKX3-2P78367 333 aa19.64■□□□□ 0.73
TOM1-214ENST00000487670 AAK1Q2M2I8 961 aa19.64■□□□□ 0.73
TOM1-214ENST00000487670 STK11IPQ8N1F8 1099 aa19.64■□□□□ 0.73
TOM1-214ENST00000487670 GNEQ9Y223 722 aaKnown RBP19.64■□□□□ 0.73
TOM1-214ENST00000487670 ZNF318Q5VUA4 2279 aa19.63■□□□□ 0.73
TOM1-214ENST00000487670 GPR37L1O60883 481 aa19.63■□□□□ 0.73
TOM1-214ENST00000487670 NDUFB10O96000 172 aa19.63■□□□□ 0.73
TOM1-214ENST00000487670 CYP2C9P11712 490 aa19.63■□□□□ 0.73
TOM1-214ENST00000487670 POU3F3P20264 500 aaPredicted RBP19.63■□□□□ 0.73
TOM1-214ENST00000487670 DEFB128Q7Z7B8 93 aa19.63■□□□□ 0.73
TOM1-214ENST00000487670 TLK2Q86UE8 772 aa19.63■□□□□ 0.73
TOM1-214ENST00000487670 ARNTL2Q8WYA1 636 aa19.63■□□□□ 0.73
TOM1-214ENST00000487670 SPC25Q9HBM1 224 aa19.63■□□□□ 0.73
TOM1-214ENST00000487670 PDGFCQ9NRA1 345 aa19.63■□□□□ 0.73
TOM1-214ENST00000487670 HOMER2Q9NSB8 354 aa19.63■□□□□ 0.73
TOM1-214ENST00000487670 LPXNO60711 386 aa19.62■□□□□ 0.73
TOM1-214ENST00000487670 RLBP1P12271 317 aa19.62■□□□□ 0.73
TOM1-214ENST00000487670 TAP1Q03518 808 aa19.62■□□□□ 0.73
TOM1-214ENST00000487670 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.62■□□□□ 0.73
TOM1-214ENST00000487670 CCDC17Q96LX7 622 aa19.62■□□□□ 0.73
TOM1-214ENST00000487670 KANSL2Q9H9L4 492 aa19.62■□□□□ 0.73
TOM1-214ENST00000487670 TRMT13Q9NUP7 481 aaKnown RBP19.62■□□□□ 0.73
TOM1-214ENST00000487670 ZBED9Q6R2W3 1325 aa19.61■□□□□ 0.73
TOM1-214ENST00000487670 SOWAHBA6NEL2 793 aa19.61■□□□□ 0.73
TOM1-214ENST00000487670 SMPD1P17405 629 aa19.61■□□□□ 0.73
TOM1-214ENST00000487670 TNFAIP2Q03169 654 aa19.61■□□□□ 0.73
TOM1-214ENST00000487670 GRB10Q13322 594 aa19.61■□□□□ 0.73
TOM1-214ENST00000487670 FSCN1Q16658 493 aaKnown RBP19.61■□□□□ 0.73
TOM1-214ENST00000487670 TMEM67Q5HYA8 995 aa19.61■□□□□ 0.73
TOM1-214ENST00000487670 ANKRD35Q8N283 1001 aa19.61■□□□□ 0.73
TOM1-214ENST00000487670 KIFC2Q96AC6 838 aa19.61■□□□□ 0.73
TOM1-214ENST00000487670 ADD2P35612 726 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms