RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 MROH8Q9H579 483 aa7.23□□□□□ -1.25
COL4A3-206ENST00000487633 NRBP1Q9UHY1 535 aa7.23□□□□□ -1.25
COL4A3-206ENST00000487633 FAM184BQ9ULE4 1060 aa7.23□□□□□ -1.25
COL4A3-206ENST00000487633 BAZ2AQ9UIF9 1905 aaKnown RBP7.23□□□□□ -1.25
COL4A3-206ENST00000487633 GVINP1Q7Z2Y8 2422 aa7.22□□□□□ -1.25
COL4A3-206ENST00000487633 DNAJC25-GNG10A0A024R161 153 aa7.22□□□□□ -1.25
COL4A3-206ENST00000487633 LINC01553A4QN01 128 aa7.22□□□□□ -1.25
COL4A3-206ENST00000487633 PRR23AA6NEV1 266 aa7.22□□□□□ -1.25
COL4A3-206ENST00000487633 TMEM221A6NGB7 291 aa7.22□□□□□ -1.25
COL4A3-206ENST00000487633 M0R296 226 aa7.22□□□□□ -1.25
COL4A3-206ENST00000487633 FLOT1O75955 427 aa7.22□□□□□ -1.25
COL4A3-206ENST00000487633 CIAO1O76071 339 aa7.22□□□□□ -1.25
COL4A3-206ENST00000487633 GTF2F1P35269 517 aaKnown RBP eCLIP7.22□□□□□ -1.25
COL4A3-206ENST00000487633 ID4P47928 161 aa7.22□□□□□ -1.25
COL4A3-206ENST00000487633 USP14P54578 494 aa7.22□□□□□ -1.25
COL4A3-206ENST00000487633 PPP4CP60510 307 aa7.22□□□□□ -1.25
COL4A3-206ENST00000487633 ACVR2BQ13705 512 aa7.22□□□□□ -1.25
COL4A3-206ENST00000487633 CCDC27Q2M243 656 aa7.22□□□□□ -1.25
COL4A3-206ENST00000487633 CERKLQ49MI3 558 aaPredicted RBP7.22□□□□□ -1.25
COL4A3-206ENST00000487633 HERC4Q5GLZ8 1057 aaPredicted RBP7.22□□□□□ -1.25
COL4A3-206ENST00000487633 SPTY2D1Q68D10 685 aaPredicted RBP7.22□□□□□ -1.25
COL4A3-206ENST00000487633 RIOX2Q8IUF8 465 aa7.22□□□□□ -1.25
COL4A3-206ENST00000487633 PBXIP1Q96AQ6 731 aa7.22□□□□□ -1.25
COL4A3-206ENST00000487633 PDGFCQ9NRA1 345 aa7.22□□□□□ -1.25
COL4A3-206ENST00000487633 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.22□□□□□ -1.25
COL4A3-206ENST00000487633 HOXC10Q9NYD6 342 aa7.22□□□□□ -1.25
COL4A3-206ENST00000487633 ZNF214Q9UL59 606 aaPredicted RBP7.22□□□□□ -1.25
COL4A3-206ENST00000487633 ADAMTS5Q9UNA0 930 aa7.22□□□□□ -1.25
COL4A3-206ENST00000487633 SCN10AQ9Y5Y9 1956 aa7.22□□□□□ -1.25
COL4A3-206ENST00000487633 TPRP12270 2363 aaKnown RBP7.22□□□□□ -1.25
COL4A3-206ENST00000487633 WDR87Q6ZQQ6 2873 aa7.21□□□□□ -1.26
COL4A3-206ENST00000487633 LDHCP07864 332 aa7.21□□□□□ -1.26
COL4A3-206ENST00000487633 CYP2D6P10635 497 aa7.21□□□□□ -1.26
COL4A3-206ENST00000487633 NKX3-2P78367 333 aa7.21□□□□□ -1.26
COL4A3-206ENST00000487633 TCEAL5Q5H9L2 206 aa7.21□□□□□ -1.26
COL4A3-206ENST00000487633 FAM117BQ6P1L5 589 aa7.21□□□□□ -1.26
COL4A3-206ENST00000487633 MAMDC4Q6UXC1 1216 aa7.21□□□□□ -1.26
COL4A3-206ENST00000487633 TRIM67Q6ZTA4 783 aa7.21□□□□□ -1.26
COL4A3-206ENST00000487633 EP400NLQ6ZTU2 488 aa7.21□□□□□ -1.26
COL4A3-206ENST00000487633 ERMP1Q7Z2K6 904 aa7.21□□□□□ -1.26
COL4A3-206ENST00000487633 BMP8AQ7Z5Y6 402 aa7.21□□□□□ -1.26
COL4A3-206ENST00000487633 ADHFE1Q8IWW8 467 aa7.21□□□□□ -1.26
COL4A3-206ENST00000487633 MIGA1Q8NAN2 632 aa7.21□□□□□ -1.26
COL4A3-206ENST00000487633 PCSK9Q8NBP7 692 aaKnown RBP7.21□□□□□ -1.26
COL4A3-206ENST00000487633 EDAQ92838 391 aa7.21□□□□□ -1.26
COL4A3-206ENST00000487633 ATOH1Q92858 354 aaPredicted RBP7.21□□□□□ -1.26
COL4A3-206ENST00000487633 RMDN1Q96DB5 314 aa7.21□□□□□ -1.26
COL4A3-206ENST00000487633 SLC9A7Q96T83 725 aa7.21□□□□□ -1.26
COL4A3-206ENST00000487633 ALDH8A1Q9H2A2 487 aaPredicted RBP7.21□□□□□ -1.26
COL4A3-206ENST00000487633 PIH1D3Q9NQM4 214 aaKnown RBP7.21□□□□□ -1.26
COL4A3-206ENST00000487633 GINM1Q9NU53 330 aa7.21□□□□□ -1.26
COL4A3-206ENST00000487633 SLC5A4Q9NY91 659 aa7.21□□□□□ -1.26
COL4A3-206ENST00000487633 TRPC6Q9Y210 931 aa7.21□□□□□ -1.26
COL4A3-206ENST00000487633 GNEQ9Y223 722 aaKnown RBP7.21□□□□□ -1.26
COL4A3-206ENST00000487633 CNPY2Q9Y2B0 182 aa7.21□□□□□ -1.26
COL4A3-206ENST00000487633 DIS3Q9Y2L1 958 aaKnown RBP7.21□□□□□ -1.26
COL4A3-206ENST00000487633 MICAL3Q7RTP6 2002 aa7.21□□□□□ -1.26
COL4A3-206ENST00000487633 MAP1BP46821 2468 aaKnown RBP7.21□□□□□ -1.26
COL4A3-206ENST00000487633 MYO10Q9HD67 2058 aa7.2□□□□□ -1.26
COL4A3-206ENST00000487633 LINC01565O15544 149 aa7.2□□□□□ -1.26
COL4A3-206ENST00000487633 MAP4K4O95819 1239 aaPredicted RBP7.2□□□□□ -1.26
COL4A3-206ENST00000487633 CYP2E1P05181 493 aaPredicted RBP7.2□□□□□ -1.26
COL4A3-206ENST00000487633 IQCF3P0C7M6 154 aa7.2□□□□□ -1.26
COL4A3-206ENST00000487633 SMPD1P17405 629 aa7.2□□□□□ -1.26
COL4A3-206ENST00000487633 ARID4AP29374 1257 aaPredicted RBP7.2□□□□□ -1.26
COL4A3-206ENST00000487633 STAT3P40763 770 aa7.2□□□□□ -1.26
COL4A3-206ENST00000487633 ERVK-21P61565 698 aa7.2□□□□□ -1.26
COL4A3-206ENST00000487633 WDR5P61964 334 aaKnown RBP7.2□□□□□ -1.26
COL4A3-206ENST00000487633 CNTN2Q02246 1040 aa7.2□□□□□ -1.26
COL4A3-206ENST00000487633 GABPAQ06546 454 aa7.2□□□□□ -1.26
COL4A3-206ENST00000487633 NAA16Q6N069 864 aaPredicted RBP7.2□□□□□ -1.26
COL4A3-206ENST00000487633 ARMCX2Q7L311 632 aa7.2□□□□□ -1.26
COL4A3-206ENST00000487633 RPUSD2Q8IZ73 545 aaKnown RBP7.2□□□□□ -1.26
COL4A3-206ENST00000487633 MRPL50Q8N5N7 158 aaKnown RBP7.2□□□□□ -1.26
COL4A3-206ENST00000487633 PHOSPHO2Q8TCD6 241 aa7.2□□□□□ -1.26
COL4A3-206ENST00000487633 ASIC4Q96FT7 647 aa7.2□□□□□ -1.26
COL4A3-206ENST00000487633 CTAGE1Q96RT6 745 aa7.2□□□□□ -1.26
COL4A3-206ENST00000487633 FSD1Q9BTV5 496 aa7.2□□□□□ -1.26
COL4A3-206ENST00000487633 TRIM34Q9BYJ4 488 aa7.2□□□□□ -1.26
COL4A3-206ENST00000487633 LMCD1Q9NZU5 365 aa7.2□□□□□ -1.26
COL4A3-206ENST00000487633 LRP2BPQ9P2M1 347 aa7.2□□□□□ -1.26
COL4A3-206ENST00000487633 SERPINB13Q9UIV8 391 aa7.2□□□□□ -1.26
COL4A3-206ENST00000487633 PROB1E7EW31 1015 aa7.19□□□□□ -1.26
COL4A3-206ENST00000487633 VWA5AO00534 786 aa7.19□□□□□ -1.26
COL4A3-206ENST00000487633 MBTPS2O43462 519 aa7.19□□□□□ -1.26
COL4A3-206ENST00000487633 HOXB3P14651 431 aaPredicted RBP7.19□□□□□ -1.26
COL4A3-206ENST00000487633 AKR1B1P15121 316 aa7.19□□□□□ -1.26
COL4A3-206ENST00000487633 AVPR2P30518 371 aa7.19□□□□□ -1.26
COL4A3-206ENST00000487633 IL15P40933 162 aaPredicted RBP7.19□□□□□ -1.26
COL4A3-206ENST00000487633 SLC4A3P48751 1232 aa7.19□□□□□ -1.26
COL4A3-206ENST00000487633 GSTO1P78417 241 aa7.19□□□□□ -1.26
COL4A3-206ENST00000487633 KCTD2Q14681 263 aa7.19□□□□□ -1.26
COL4A3-206ENST00000487633 COL19A1Q14993 1142 aa7.19□□□□□ -1.26
COL4A3-206ENST00000487633 CCDC144CPQ8IYA2 1237 aa7.19□□□□□ -1.26
COL4A3-206ENST00000487633 FBXL6Q8N531 539 aa7.19□□□□□ -1.26
COL4A3-206ENST00000487633 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.19□□□□□ -1.26
COL4A3-206ENST00000487633 DYNLL2Q96FJ2 89 aa7.19□□□□□ -1.26
COL4A3-206ENST00000487633 NEUROD6Q96NK8 337 aa7.19□□□□□ -1.26
COL4A3-206ENST00000487633 PURBQ96QR8 312 aaKnown RBP7.19□□□□□ -1.26
COL4A3-206ENST00000487633 NUP88Q99567 741 aaPredicted RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms