RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 DNAJC25-GNG10A0A024R161 153 aa24■■□□□ 1.43
HDAC4-209ENST00000487617 SEPT4O43236 478 aa24■■□□□ 1.43
HDAC4-209ENST00000487617 EVI5O60447 810 aa24■■□□□ 1.43
HDAC4-209ENST00000487617 ALAS1P13196 640 aa24■■□□□ 1.43
HDAC4-209ENST00000487617 TKFCQ3LXA3 575 aa24■■□□□ 1.43
HDAC4-209ENST00000487617 RNF146Q9NTX7 359 aa24■■□□□ 1.43
HDAC4-209ENST00000487617 NRBP1Q9UHY1 535 aa24■■□□□ 1.43
HDAC4-209ENST00000487617 NR2E3Q9Y5X4 410 aa24■■□□□ 1.43
HDAC4-209ENST00000487617 U3KPZ7 1027 aaPredicted RBP24■■□□□ 1.43
HDAC4-209ENST00000487617 ZNF543Q08ER8 600 aa23.99■■□□□ 1.43
HDAC4-209ENST00000487617 ANO1Q5XXA6 986 aa23.99■■□□□ 1.43
HDAC4-209ENST00000487617 SKAP1Q86WV1 359 aa23.99■■□□□ 1.43
HDAC4-209ENST00000487617 TRERF1Q96PN7 1200 aa23.99■■□□□ 1.43
HDAC4-209ENST00000487617 RANBP17Q9H2T7 1088 aaKnown RBP23.99■■□□□ 1.43
HDAC4-209ENST00000487617 KAT14Q9H8E8 782 aa23.99■■□□□ 1.43
HDAC4-209ENST00000487617 CCPG1Q9ULG6 757 aa23.99■■□□□ 1.43
HDAC4-209ENST00000487617 SNHG28P0DPA3 235 aa23.98■■□□□ 1.43
HDAC4-209ENST00000487617 MSL3Q8N5Y2 521 aaKnown RBP23.98■■□□□ 1.43
HDAC4-209ENST00000487617 ENAHQ8N8S7 591 aaPredicted RBP23.98■■□□□ 1.43
HDAC4-209ENST00000487617 PNMA1Q8ND90 353 aa23.98■■□□□ 1.43
HDAC4-209ENST00000487617 ANKS1AQ92625 1134 aa23.98■■□□□ 1.43
HDAC4-209ENST00000487617 UBAC1Q9BSL1 405 aa23.98■■□□□ 1.43
HDAC4-209ENST00000487617 TNKSO95271 1327 aa23.98■■□□□ 1.43
HDAC4-209ENST00000487617 ICAM1P05362 532 aa23.97■■□□□ 1.43
HDAC4-209ENST00000487617 TRDNQ13061 729 aa23.97■■□□□ 1.43
HDAC4-209ENST00000487617 ZNFX1Q9P2E3 1918 aaKnown RBP23.97■■□□□ 1.43
HDAC4-209ENST00000487617 CNPY2Q9Y2B0 182 aa23.97■■□□□ 1.43
HDAC4-209ENST00000487617 PFASO15067 1338 aa23.96■■□□□ 1.43
HDAC4-209ENST00000487617 SYNGAP1Q96PV0 1343 aa23.96■■□□□ 1.43
HDAC4-209ENST00000487617 CYP21A2P08686 494 aa23.96■■□□□ 1.43
HDAC4-209ENST00000487617 COL6A1P12109 1028 aa23.96■■□□□ 1.43
HDAC4-209ENST00000487617 TAL1P17542 331 aaPredicted RBP23.96■■□□□ 1.43
HDAC4-209ENST00000487617 ZNF467Q7Z7K2 595 aaPredicted RBP23.96■■□□□ 1.43
HDAC4-209ENST00000487617 A1CFQ9NQ94 594 aaKnown RBP23.96■■□□□ 1.43
HDAC4-209ENST00000487617 POTEB2H3BUK9 544 aa23.95■■□□□ 1.42
HDAC4-209ENST00000487617 GOLGA8HP0CJ92 632 aa23.95■■□□□ 1.42
HDAC4-209ENST00000487617 MUM1L1Q5H9M0 696 aa23.95■■□□□ 1.42
HDAC4-209ENST00000487617 GPATCH4Q5T3I0 446 aaKnown RBP23.95■■□□□ 1.42
HDAC4-209ENST00000487617 MAMDC4Q6UXC1 1216 aa23.95■■□□□ 1.42
HDAC4-209ENST00000487617 KIAA1211Q6ZU35 1233 aa23.95■■□□□ 1.42
HDAC4-209ENST00000487617 ARRDC4Q8NCT1 418 aa23.95■■□□□ 1.42
HDAC4-209ENST00000487617 CCDC136Q96JN2 1154 aa23.95■■□□□ 1.42
HDAC4-209ENST00000487617 DNM1LO00429 736 aa23.94■■□□□ 1.42
HDAC4-209ENST00000487617 MYCNP04198 464 aaPredicted RBP23.94■■□□□ 1.42
HDAC4-209ENST00000487617 ZNF865P0CJ78 1059 aaPredicted RBP23.94■■□□□ 1.42
HDAC4-209ENST00000487617 IFIT1BQ5T764 474 aaKnown RBP23.94■■□□□ 1.42
HDAC4-209ENST00000487617 CYB5R4Q7L1T6 521 aa23.94■■□□□ 1.42
HDAC4-209ENST00000487617 MAP4K1Q92918 833 aa23.94■■□□□ 1.42
HDAC4-209ENST00000487617 FGD4Q96M96 766 aa23.94■■□□□ 1.42
HDAC4-209ENST00000487617 SNAI1O95863 264 aaPredicted RBP23.93■■□□□ 1.42
HDAC4-209ENST00000487617 RARBP10826 455 aa23.93■■□□□ 1.42
HDAC4-209ENST00000487617 CNTN2Q02246 1040 aa23.93■■□□□ 1.42
HDAC4-209ENST00000487617 BMP2KLQ5H9B9 411 aa23.93■■□□□ 1.42
HDAC4-209ENST00000487617 GJC2Q5T442 439 aaPredicted RBP23.93■■□□□ 1.42
HDAC4-209ENST00000487617 C7orf61Q8IZ16 206 aa23.93■■□□□ 1.42
HDAC4-209ENST00000487617 SENP6Q9GZR1 1112 aaPredicted RBP23.93■■□□□ 1.42
HDAC4-209ENST00000487617 ZHX1Q9UKY1 873 aaPredicted RBP23.93■■□□□ 1.42
HDAC4-209ENST00000487617 RBM8AQ9Y5S9 174 aaKnown RBP23.93■■□□□ 1.42
HDAC4-209ENST00000487617 E7EWF7 191 aa23.92■■□□□ 1.42
HDAC4-209ENST00000487617 AKR1A1P14550 325 aa23.92■■□□□ 1.42
HDAC4-209ENST00000487617 NSMFQ6X4W1 530 aa23.92■■□□□ 1.42
HDAC4-209ENST00000487617 RALYLQ86SE5 291 aaKnown RBP23.92■■□□□ 1.42
HDAC4-209ENST00000487617 FAM133AQ8N9E0 248 aa23.92■■□□□ 1.42
HDAC4-209ENST00000487617 ESYT1Q9BSJ8 1104 aa23.92■■□□□ 1.42
HDAC4-209ENST00000487617 UBA5Q9GZZ9 404 aa23.92■■□□□ 1.42
HDAC4-209ENST00000487617 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.92■■□□□ 1.42
HDAC4-209ENST00000487617 TAF6LQ9Y6J9 622 aa23.92■■□□□ 1.42
HDAC4-209ENST00000487617 PLXNA1Q9UIW2 1896 aa23.92■■□□□ 1.42
HDAC4-209ENST00000487617 KBTBD13C9JR72 458 aa23.91■■□□□ 1.42
HDAC4-209ENST00000487617 SEC23AQ15436 765 aa23.91■■□□□ 1.42
HDAC4-209ENST00000487617 ASPRV1Q53RT3 343 aa23.91■■□□□ 1.42
HDAC4-209ENST00000487617 ARMCX2Q7L311 632 aa23.91■■□□□ 1.42
HDAC4-209ENST00000487617 NCOA7Q8NI08 942 aa23.91■■□□□ 1.42
HDAC4-209ENST00000487617 CPVLQ9H3G5 476 aa23.91■■□□□ 1.42
HDAC4-209ENST00000487617 XPNPEP3Q9NQH7 507 aa23.91■■□□□ 1.42
HDAC4-209ENST00000487617 CYP39A1Q9NYL5 469 aa23.91■■□□□ 1.42
HDAC4-209ENST00000487617 PNMA2Q9UL42 364 aa23.91■■□□□ 1.42
HDAC4-209ENST00000487617 SOWAHBA6NEL2 793 aa23.9■■□□□ 1.42
HDAC4-209ENST00000487617 PARP1P09874 1014 aaKnown RBP23.9■■□□□ 1.42
HDAC4-209ENST00000487617 ACVR2BQ13705 512 aa23.9■■□□□ 1.42
HDAC4-209ENST00000487617 LRRC41Q15345 812 aa23.9■■□□□ 1.42
HDAC4-209ENST00000487617 LRRC26Q2I0M4 334 aa23.9■■□□□ 1.42
HDAC4-209ENST00000487617 CCDC144CPQ8IYA2 1237 aa23.9■■□□□ 1.42
HDAC4-209ENST00000487617 FAM184BQ9ULE4 1060 aa23.9■■□□□ 1.42
HDAC4-209ENST00000487617 COLQQ9Y215 455 aaPredicted RBP23.9■■□□□ 1.42
HDAC4-209ENST00000487617 FRMPD3Q5JV73 1810 aa23.89■■□□□ 1.42
HDAC4-209ENST00000487617 NEFLP07196 543 aa23.89■■□□□ 1.41
HDAC4-209ENST00000487617 CHRDL2Q6WN34 429 aa23.89■■□□□ 1.41
HDAC4-209ENST00000487617 STOX1Q6ZVD7 989 aa23.89■■□□□ 1.41
HDAC4-209ENST00000487617 LENG1Q96BZ8 264 aaPredicted RBP23.89■■□□□ 1.41
HDAC4-209ENST00000487617 LSG1Q9H089 658 aaKnown RBP23.89■■□□□ 1.41
HDAC4-209ENST00000487617 ABHD16BQ9H3Z7 469 aa23.89■■□□□ 1.41
HDAC4-209ENST00000487617 WDR19Q8NEZ3 1342 aa23.88■■□□□ 1.41
HDAC4-209ENST00000487617 ERICH2A1L162 156 aa23.88■■□□□ 1.41
HDAC4-209ENST00000487617 ASB14A6NK59 587 aa23.88■■□□□ 1.41
HDAC4-209ENST00000487617 NFIBO00712 420 aa23.88■■□□□ 1.41
HDAC4-209ENST00000487617 IFIT3O14879 490 aaKnown RBP23.88■■□□□ 1.41
HDAC4-209ENST00000487617 PGK1P00558 417 aa23.88■■□□□ 1.41
HDAC4-209ENST00000487617 HABP4Q5JVS0 413 aaKnown RBP23.88■■□□□ 1.41
HDAC4-209ENST00000487617 ZMYND8Q9ULU4 1186 aaPredicted RBP23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms