RNA–Protein interactions for RNA: ENST00000487565.5

GARNL3-218, Transcript of GTPase activating Rap/RanGAP domain like 3, human

TSL 4

Gene GARNL3, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GARNL3-218	ENST00000487565	SHTN1	A0MZ66	631 aa		9.11	□□□□□ -0.95
GARNL3-218	ENST00000487565	SFI1	A8K8P3	1242 aa		9.11	□□□□□ -0.95
GARNL3-218	ENST00000487565	MYO1B	O43795	1136 aa		9.11	□□□□□ -0.95
GARNL3-218	ENST00000487565	APP	P05067	770 aa		9.11	□□□□□ -0.95
GARNL3-218	ENST00000487565	BMP4	P12644	408 aa		9.11	□□□□□ -0.95
GARNL3-218	ENST00000487565	FGFR3	P22607	806 aa		9.11	□□□□□ -0.95
GARNL3-218	ENST00000487565	NOS2	P35228	1153 aa		9.11	□□□□□ -0.95
GARNL3-218	ENST00000487565	TXLNA	P40222	546 aa		9.11	□□□□□ -0.95
GARNL3-218	ENST00000487565	USP5	P45974	858 aa		9.11	□□□□□ -0.95
GARNL3-218	ENST00000487565	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	9.11	□□□□□ -0.95
GARNL3-218	ENST00000487565	VPS53	Q5VIR6	699 aa		9.11	□□□□□ -0.95
GARNL3-218	ENST00000487565	APOBEC3H	Q6NTF7	200 aa	Known RBP	9.11	□□□□□ -0.95
GARNL3-218	ENST00000487565	AMOTL1	Q8IY63	956 aa		9.11	□□□□□ -0.95
GARNL3-218	ENST00000487565	ZIC5	Q96T25	663 aa		9.11	□□□□□ -0.95
GARNL3-218	ENST00000487565	OXCT2	Q9BYC2	517 aa	Predicted RBP	9.11	□□□□□ -0.95
GARNL3-218	ENST00000487565	LSG1	Q9H089	658 aa	Known RBP	9.11	□□□□□ -0.95
GARNL3-218	ENST00000487565	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	9.11	□□□□□ -0.95
GARNL3-218	ENST00000487565	NDFIP2	Q9NV92	336 aa		9.11	□□□□□ -0.95
GARNL3-218	ENST00000487565	USP40	Q9NVE5	1235 aa		9.11	□□□□□ -0.95
GARNL3-218	ENST00000487565	CNOT7	Q9UIV1	285 aa	Known RBP	9.11	□□□□□ -0.95
GARNL3-218	ENST00000487565	MYH2	Q9UKX2	1941 aa		9.11	□□□□□ -0.95
GARNL3-218	ENST00000487565	DDX60L	Q5H9U9	1706 aa	Known RBP	9.11	□□□□□ -0.95
GARNL3-218	ENST00000487565	SERTM1	A2A2V5	107 aa		9.1	□□□□□ -0.95
GARNL3-218	ENST00000487565	IQCA1L	A6NCM1	817 aa		9.1	□□□□□ -0.95
GARNL3-218	ENST00000487565	GLTPD2	A6NH11	291 aa		9.1	□□□□□ -0.95
GARNL3-218	ENST00000487565	RNF225	M0QZC1	329 aa	Predicted RBP	9.1	□□□□□ -0.95
GARNL3-218	ENST00000487565		M0R2N6	131 aa		9.1	□□□□□ -0.95
GARNL3-218	ENST00000487565	ATXN7	O15265	892 aa	Predicted RBP	9.1	□□□□□ -0.95
GARNL3-218	ENST00000487565	EPB41L2	O43491	1005 aa	Known RBP	9.1	□□□□□ -0.95
GARNL3-218	ENST00000487565	PRKAB2	O43741	272 aa		9.1	□□□□□ -0.95
GARNL3-218	ENST00000487565	HSPD1	P10809	573 aa	Known RBP	9.1	□□□□□ -0.95
GARNL3-218	ENST00000487565	RHBDL3	P58872	404 aa		9.1	□□□□□ -0.95
GARNL3-218	ENST00000487565	PTH1R	Q03431	593 aa		9.1	□□□□□ -0.95
GARNL3-218	ENST00000487565	CDC42EP5	Q6NZY7	148 aa		9.1	□□□□□ -0.95
GARNL3-218	ENST00000487565	MAPKAPK5	Q8IW41	473 aa		9.1	□□□□□ -0.95
GARNL3-218	ENST00000487565	TSEN2	Q8NCE0	465 aa	Known RBP	9.1	□□□□□ -0.95
GARNL3-218	ENST00000487565	TRPM4	Q8TD43	1214 aa		9.1	□□□□□ -0.95
GARNL3-218	ENST00000487565	SDR42E1	Q8WUS8	393 aa		9.1	□□□□□ -0.95
GARNL3-218	ENST00000487565	KLRG1	Q96E93	195 aa		9.1	□□□□□ -0.95
GARNL3-218	ENST00000487565	NAPB	Q9H115	298 aa		9.1	□□□□□ -0.95
GARNL3-218	ENST00000487565	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	9.1	□□□□□ -0.95
GARNL3-218	ENST00000487565	ADARB2	Q9NS39	739 aa	Known RBP	9.1	□□□□□ -0.95
GARNL3-218	ENST00000487565	CTNNA3	Q9UI47	895 aa		9.1	□□□□□ -0.95
GARNL3-218	ENST00000487565	HACL1	Q9UJ83	578 aa		9.1	□□□□□ -0.95
GARNL3-218	ENST00000487565	PCDHAC2	Q9Y5I4	1007 aa		9.1	□□□□□ -0.95
GARNL3-218	ENST00000487565	RBM8A	Q9Y5S9	174 aa	Known RBP	9.1	□□□□□ -0.95
GARNL3-218	ENST00000487565	FLT1	P17948	1338 aa		9.09	□□□□□ -0.95
GARNL3-218	ENST00000487565	WDR90	Q96KV7	1748 aa		9.09	□□□□□ -0.95
GARNL3-218	ENST00000487565	CLRN2	A0PK11	232 aa		9.09	□□□□□ -0.95
GARNL3-218	ENST00000487565	GSG1L2	A8MUP6	293 aa		9.09	□□□□□ -0.95
GARNL3-218	ENST00000487565	FOXP2	O15409	715 aa		9.09	□□□□□ -0.95
GARNL3-218	ENST00000487565	WDHD1	O75717	1129 aa	Predicted RBP	9.09	□□□□□ -0.95
GARNL3-218	ENST00000487565	EPS15	P42566	896 aa		9.09	□□□□□ -0.95
GARNL3-218	ENST00000487565	CTBS	Q01459	385 aa		9.09	□□□□□ -0.95
GARNL3-218	ENST00000487565	KCNMA1	Q12791	1236 aa		9.09	□□□□□ -0.95
GARNL3-218	ENST00000487565	PICALM	Q13492	652 aa		9.09	□□□□□ -0.95
GARNL3-218	ENST00000487565	GIMAP6	Q6P9H5	292 aa		9.09	□□□□□ -0.95
GARNL3-218	ENST00000487565	NEDD1	Q8NHV4	660 aa		9.09	□□□□□ -0.95
GARNL3-218	ENST00000487565	TGFBRAP1	Q8WUH2	860 aa		9.09	□□□□□ -0.95
GARNL3-218	ENST00000487565	ZBED3	Q96IU2	234 aa	Predicted RBP	9.09	□□□□□ -0.95
GARNL3-218	ENST00000487565	TDRD3	Q9H7E2	651 aa	Known RBP	9.09	□□□□□ -0.95
GARNL3-218	ENST00000487565	VEZT	Q9HBM0	779 aa		9.09	□□□□□ -0.95
GARNL3-218	ENST00000487565	ATP8A2	Q9NTI2	1148 aa		9.09	□□□□□ -0.95
GARNL3-218	ENST00000487565	MCM9	Q9NXL9	1143 aa		9.09	□□□□□ -0.95
GARNL3-218	ENST00000487565	ARPP21	Q9UBL0	812 aa	Predicted RBP	9.09	□□□□□ -0.95
GARNL3-218	ENST00000487565	ZNF70	Q9UC06	446 aa	Predicted RBP	9.09	□□□□□ -0.95
GARNL3-218	ENST00000487565	LAMB1	P07942	1786 aa		9.09	□□□□□ -0.95
GARNL3-218	ENST00000487565	COL2A1	P02458	1487 aa	Predicted RBP	9.08	□□□□□ -0.96
GARNL3-218	ENST00000487565	LAMA4	Q16363	1823 aa		9.08	□□□□□ -0.96
GARNL3-218	ENST00000487565	DCDC2B	A2VCK2	349 aa		9.08	□□□□□ -0.96
GARNL3-218	ENST00000487565	PATL2	C9JE40	543 aa	Known RBP	9.08	□□□□□ -0.96
GARNL3-218	ENST00000487565	WNT10B	O00744	389 aa		9.08	□□□□□ -0.96
GARNL3-218	ENST00000487565	EGFR	P00533	1210 aa		9.08	□□□□□ -0.96
GARNL3-218	ENST00000487565	EPHX2	P34913	555 aa		9.08	□□□□□ -0.96
GARNL3-218	ENST00000487565	CACNB3	P54284	484 aa		9.08	□□□□□ -0.96
GARNL3-218	ENST00000487565	PSMA6	P60900	246 aa	Known RBP	9.08	□□□□□ -0.96
GARNL3-218	ENST00000487565	TNFAIP1	Q13829	316 aa		9.08	□□□□□ -0.96
GARNL3-218	ENST00000487565	ALX1	Q15699	326 aa		9.08	□□□□□ -0.96
GARNL3-218	ENST00000487565	IMMT	Q16891	758 aa	Known RBP	9.08	□□□□□ -0.96
GARNL3-218	ENST00000487565	IFNL3	Q8IZI9	196 aa		9.08	□□□□□ -0.96
GARNL3-218	ENST00000487565	MAP4K1	Q92918	833 aa		9.08	□□□□□ -0.96
GARNL3-218	ENST00000487565	PRMT6	Q96LA8	375 aa	Predicted RBP	9.08	□□□□□ -0.96
GARNL3-218	ENST00000487565	DCP1A	Q9NPI6	582 aa	Predicted RBP	9.08	□□□□□ -0.96
GARNL3-218	ENST00000487565	GGA3	Q9NZ52	723 aa		9.08	□□□□□ -0.96
GARNL3-218	ENST00000487565	SAP30BP	Q9UHR5	308 aa	Known RBP	9.08	□□□□□ -0.96
GARNL3-218	ENST00000487565	TCP10L2	B9ZVM9	353 aa		9.07	□□□□□ -0.96
GARNL3-218	ENST00000487565	C2CD2L	O14523	706 aa		9.07	□□□□□ -0.96
GARNL3-218	ENST00000487565	SLC27A2	O14975	620 aa		9.07	□□□□□ -0.96
GARNL3-218	ENST00000487565	KHNYN	O15037	678 aa	Known RBP	9.07	□□□□□ -0.96
GARNL3-218	ENST00000487565	ENTPD3	O75355	529 aa		9.07	□□□□□ -0.96
GARNL3-218	ENST00000487565	DKK1	O94907	266 aa		9.07	□□□□□ -0.96
GARNL3-218	ENST00000487565	ZKSCAN1	P17029	563 aa	Predicted RBP	9.07	□□□□□ -0.96
GARNL3-218	ENST00000487565	HSPA4	P34932	840 aa		9.07	□□□□□ -0.96
GARNL3-218	ENST00000487565	TNNI2	P48788	182 aa		9.07	□□□□□ -0.96
GARNL3-218	ENST00000487565	SEC13	P55735	322 aa		9.07	□□□□□ -0.96
GARNL3-218	ENST00000487565	NFIA	Q12857	509 aa		9.07	□□□□□ -0.96
GARNL3-218	ENST00000487565	NBPF9	Q3BBW0	867 aa		9.07	□□□□□ -0.96
GARNL3-218	ENST00000487565	SH3PXD2A	Q5TCZ1	1133 aa		9.07	□□□□□ -0.96
GARNL3-218	ENST00000487565	FKBP1C	Q5VVH2	108 aa		9.07	□□□□□ -0.96
GARNL3-218	ENST00000487565	CREB3L3	Q68CJ9	461 aa		9.07	□□□□□ -0.96

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