RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, human

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLOD3-215	ENST00000487563	DIAPH3	Q9NSV4	1193 aa		27.86	■■■□□ 2.05
PLOD3-215	ENST00000487563	SOX1	O00570	391 aa	Predicted RBP	27.85	■■■□□ 2.05
PLOD3-215	ENST00000487563	PLA2G6	O60733	806 aa		27.85	■■■□□ 2.05
PLOD3-215	ENST00000487563	PGK1	P00558	417 aa		27.85	■■■□□ 2.05
PLOD3-215	ENST00000487563	FGR	P09769	529 aa		27.85	■■■□□ 2.05
PLOD3-215	ENST00000487563	CCDC174	Q6PII3	467 aa		27.85	■■■□□ 2.05
PLOD3-215	ENST00000487563	MAMDC4	Q6UXC1	1216 aa		27.85	■■■□□ 2.05
PLOD3-215	ENST00000487563	OSBPL3	Q9H4L5	887 aa		27.85	■■■□□ 2.05
PLOD3-215	ENST00000487563	RNF146	Q9NTX7	359 aa		27.85	■■■□□ 2.05
PLOD3-215	ENST00000487563	FAM184B	Q9ULE4	1060 aa		27.85	■■■□□ 2.05
PLOD3-215	ENST00000487563	RASGRP2	Q7LDG7	609 aa		27.84	■■■□□ 2.05
PLOD3-215	ENST00000487563	DCAF4	Q8WV16	495 aa		27.84	■■■□□ 2.05
PLOD3-215	ENST00000487563	LENG1	Q96BZ8	264 aa	Predicted RBP	27.84	■■■□□ 2.05
PLOD3-215	ENST00000487563	AGBL1	Q96MI9	1066 aa		27.84	■■■□□ 2.05
PLOD3-215	ENST00000487563	SMCHD1	A6NHR9	2005 aa		27.84	■■■□□ 2.05
PLOD3-215	ENST00000487563	SNAI1	O95863	264 aa	Predicted RBP	27.83	■■■□□ 2.05
PLOD3-215	ENST00000487563	TOP1	P11387	765 aa	Known RBP	27.83	■■■□□ 2.05
PLOD3-215	ENST00000487563	ALAS1	P13196	640 aa		27.83	■■■□□ 2.05
PLOD3-215	ENST00000487563	TKFC	Q3LXA3	575 aa		27.83	■■■□□ 2.05
PLOD3-215	ENST00000487563	TRIM60	Q495X7	471 aa		27.83	■■■□□ 2.05
PLOD3-215	ENST00000487563	MFSD6	Q6ZSS7	791 aa		27.83	■■■□□ 2.05
PLOD3-215	ENST00000487563	LRCH3	Q96II8	777 aa		27.83	■■■□□ 2.05
PLOD3-215	ENST00000487563	PRDM5	Q9NQX1	630 aa	Predicted RBP	27.83	■■■□□ 2.05
PLOD3-215	ENST00000487563	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	27.83	■■■□□ 2.05
PLOD3-215	ENST00000487563	PRR12	Q9ULL5	1215 aa		27.83	■■■□□ 2.05
PLOD3-215	ENST00000487563	PHF24	Q9UPV7	400 aa		27.83	■■■□□ 2.05
PLOD3-215	ENST00000487563	POTEB2	H3BUK9	544 aa		27.82	■■■□□ 2.04
PLOD3-215	ENST00000487563	PC	P11498	1178 aa	Known RBP	27.82	■■■□□ 2.04
PLOD3-215	ENST00000487563	NOV	P48745	357 aa		27.82	■■■□□ 2.04
PLOD3-215	ENST00000487563	SNAP25	P60880	206 aa		27.82	■■■□□ 2.04
PLOD3-215	ENST00000487563	AKNAD1	Q5T1N1	836 aa		27.82	■■■□□ 2.04
PLOD3-215	ENST00000487563	TRERF1	Q96PN7	1200 aa		27.82	■■■□□ 2.04
PLOD3-215	ENST00000487563	RNF41	Q9H4P4	317 aa	Predicted RBP	27.82	■■■□□ 2.04
PLOD3-215	ENST00000487563	SUPT16H	Q9Y5B9	1047 aa	Known RBP	27.82	■■■□□ 2.04
PLOD3-215	ENST00000487563	ZNF536	O15090	1300 aa		27.82	■■■□□ 2.04
PLOD3-215	ENST00000487563	HIP1	O00291	1037 aa		27.81	■■■□□ 2.04
PLOD3-215	ENST00000487563	ACVR2B	Q13705	512 aa		27.81	■■■□□ 2.04
PLOD3-215	ENST00000487563	CWC27	Q6UX04	472 aa	Known RBP	27.81	■■■□□ 2.04
PLOD3-215	ENST00000487563	TMEM47	Q9BQJ4	181 aa		27.81	■■■□□ 2.04
PLOD3-215	ENST00000487563	TCP11L1	Q9NUJ3	509 aa		27.81	■■■□□ 2.04
PLOD3-215	ENST00000487563	SNX17	Q15036	470 aa		27.8	■■■□□ 2.04
PLOD3-215	ENST00000487563	ARMCX2	Q7L311	632 aa		27.8	■■■□□ 2.04
PLOD3-215	ENST00000487563	TBC1D10C	Q8IV04	446 aa		27.8	■■■□□ 2.04
PLOD3-215	ENST00000487563	ABHD16B	Q9H3Z7	469 aa		27.8	■■■□□ 2.04
PLOD3-215	ENST00000487563	A1CF	Q9NQ94	594 aa	Known RBP	27.8	■■■□□ 2.04
PLOD3-215	ENST00000487563	CCPG1	Q9ULG6	757 aa		27.8	■■■□□ 2.04
PLOD3-215	ENST00000487563	SYNRG	Q9UMZ2	1314 aa		27.8	■■■□□ 2.04
PLOD3-215	ENST00000487563	CNTN2	Q02246	1040 aa		27.79	■■■□□ 2.04
PLOD3-215	ENST00000487563	FGD4	Q96M96	766 aa		27.79	■■■□□ 2.04
PLOD3-215	ENST00000487563	FRMPD2	Q68DX3	1309 aa	Predicted RBP	27.78	■■■□□ 2.04
PLOD3-215	ENST00000487563	ZNF213	O14771	459 aa		27.78	■■■□□ 2.04
PLOD3-215	ENST00000487563	ADAMTS4	O75173	837 aa		27.78	■■■□□ 2.04
PLOD3-215	ENST00000487563	LRIT3	Q3SXY7	679 aa		27.78	■■■□□ 2.04
PLOD3-215	ENST00000487563	CCDC144CP	Q8IYA2	1237 aa		27.78	■■■□□ 2.04
PLOD3-215	ENST00000487563	ESR2	Q92731	530 aa		27.78	■■■□□ 2.04
PLOD3-215	ENST00000487563	GPCPD1	Q9NPB8	672 aa		27.78	■■■□□ 2.04
PLOD3-215	ENST00000487563	DNAH12	Q6ZR08	3092 aa		27.77	■■■□□ 2.04
PLOD3-215	ENST00000487563		A0A1W2PQ45	241 aa	Predicted RBP	27.77	■■■□□ 2.04
PLOD3-215	ENST00000487563		A0A1W2PQY0	241 aa		27.77	■■■□□ 2.04
PLOD3-215	ENST00000487563	DUSP11	O75319	330 aa	Known RBP	27.77	■■■□□ 2.04
PLOD3-215	ENST00000487563	SLC16A2	P36021	539 aa		27.77	■■■□□ 2.04
PLOD3-215	ENST00000487563	CCDC144B	Q3MJ40	725 aa		27.77	■■■□□ 2.04
PLOD3-215	ENST00000487563	SYDE2	Q5VT97	1194 aa		27.77	■■■□□ 2.04
PLOD3-215	ENST00000487563	C1orf53	Q5VUE5	145 aa		27.77	■■■□□ 2.04
PLOD3-215	ENST00000487563	TTBK2	Q6IQ55	1244 aa		27.77	■■■□□ 2.04
PLOD3-215	ENST00000487563	FAM133A	Q8N9E0	248 aa		27.77	■■■□□ 2.04
PLOD3-215	ENST00000487563	TSEN34	Q9BSV6	310 aa	Known RBP	27.77	■■■□□ 2.04
PLOD3-215	ENST00000487563	SPC25	Q9HBM1	224 aa		27.77	■■■□□ 2.04
PLOD3-215	ENST00000487563	MCM3AP	O60318	1980 aa		27.77	■■■□□ 2.04
PLOD3-215	ENST00000487563	TTC14	Q96N46	770 aa		27.76	■■■□□ 2.03
PLOD3-215	ENST00000487563	SZT2	Q5T011	3432 aa		27.76	■■■□□ 2.03
PLOD3-215	ENST00000487563	NEDD4	P46934	1319 aa		27.75	■■■□□ 2.03
PLOD3-215	ENST00000487563	ASB14	A6NK59	587 aa		27.75	■■■□□ 2.03
PLOD3-215	ENST00000487563	ICAM1	P05362	532 aa		27.75	■■■□□ 2.03
PLOD3-215	ENST00000487563	ACLY	P53396	1101 aa		27.75	■■■□□ 2.03
PLOD3-215	ENST00000487563	TLE2	Q04725	743 aa		27.75	■■■□□ 2.03
PLOD3-215	ENST00000487563	MUM1L1	Q5H9M0	696 aa		27.75	■■■□□ 2.03
PLOD3-215	ENST00000487563	NSMF	Q6X4W1	530 aa		27.75	■■■□□ 2.03
PLOD3-215	ENST00000487563	NUP133	Q8WUM0	1156 aa		27.75	■■■□□ 2.03
PLOD3-215	ENST00000487563	RANBP17	Q9H2T7	1088 aa	Known RBP	27.75	■■■□□ 2.03
PLOD3-215	ENST00000487563	STARD7	Q9NQZ5	370 aa		27.75	■■■□□ 2.03
PLOD3-215	ENST00000487563	PDLIM7	Q9NR12	457 aa		27.75	■■■□□ 2.03
PLOD3-215	ENST00000487563	LTBP2	Q14767	1821 aa		27.74	■■■□□ 2.03
PLOD3-215	ENST00000487563	LAMA4	Q16363	1823 aa		27.74	■■■□□ 2.03
PLOD3-215	ENST00000487563	MOXD2P	A6NHM9	499 aa		27.74	■■■□□ 2.03
PLOD3-215	ENST00000487563	C6orf222	P0C671	652 aa	Predicted RBP	27.74	■■■□□ 2.03
PLOD3-215	ENST00000487563	PDHB	P11177	359 aa		27.74	■■■□□ 2.03
PLOD3-215	ENST00000487563	BTNL9	Q6UXG8	535 aa		27.74	■■■□□ 2.03
PLOD3-215	ENST00000487563	LAMA3	Q16787	3333 aa		27.73	■■■□□ 2.03
PLOD3-215	ENST00000487563	SOWAHB	A6NEL2	793 aa		27.73	■■■□□ 2.03
PLOD3-215	ENST00000487563	PQBP1	O60828	265 aa	Known RBP	27.73	■■■□□ 2.03
PLOD3-215	ENST00000487563	ZKSCAN3	Q9BRR0	538 aa		27.73	■■■□□ 2.03
PLOD3-215	ENST00000487563	CYP39A1	Q9NYL5	469 aa		27.73	■■■□□ 2.03
PLOD3-215	ENST00000487563	KCNA10	Q16322	511 aa		27.72	■■■□□ 2.03
PLOD3-215	ENST00000487563	GPR153	Q6NV75	609 aa		27.72	■■■□□ 2.03
PLOD3-215	ENST00000487563	NOL8	Q76FK4	1167 aa	Known RBP	27.72	■■■□□ 2.03
PLOD3-215	ENST00000487563	IQCA1	Q86XH1	822 aa		27.72	■■■□□ 2.03
PLOD3-215	ENST00000487563	PCSK9	Q8NBP7	692 aa	Known RBP	27.72	■■■□□ 2.03
PLOD3-215	ENST00000487563	KLHDC9	Q8NEP7	349 aa		27.72	■■■□□ 2.03
PLOD3-215	ENST00000487563	DSCC1	Q9BVC3	393 aa		27.72	■■■□□ 2.03

Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms