RNA–Protein interactions for RNA: ENST00000487447.1

CLIP2-207, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-207ENST00000487447 CATIPQ7Z7H3 387 aa13.61□□□□□ -0.23
CLIP2-207ENST00000487447 STAG2Q8N3U4 1231 aa13.61□□□□□ -0.23
CLIP2-207ENST00000487447 SLAIN1Q8ND83 568 aa13.61□□□□□ -0.23
CLIP2-207ENST00000487447 NUDT12Q9BQG2 462 aa13.61□□□□□ -0.23
CLIP2-207ENST00000487447 PNMA2Q9UL42 364 aa13.61□□□□□ -0.23
CLIP2-207ENST00000487447 MTMR7Q9Y216 660 aa13.61□□□□□ -0.23
CLIP2-207ENST00000487447 RIPK3Q9Y572 518 aa13.61□□□□□ -0.23
CLIP2-207ENST00000487447 SMCHD1A6NHR9 2005 aa13.6□□□□□ -0.23
CLIP2-207ENST00000487447 ECM2O94769 699 aaPredicted RBP13.6□□□□□ -0.23
CLIP2-207ENST00000487447 MYCP01106 439 aaPredicted RBP13.6□□□□□ -0.23
CLIP2-207ENST00000487447 CALM1P0DP23 149 aa13.6□□□□□ -0.23
CLIP2-207ENST00000487447 CALM2P0DP24 149 aa13.6□□□□□ -0.23
CLIP2-207ENST00000487447 CALM3P0DP25 149 aa13.6□□□□□ -0.23
CLIP2-207ENST00000487447 SMARCA1P28370 1054 aa13.6□□□□□ -0.23
CLIP2-207ENST00000487447 EVCP57679 992 aa13.6□□□□□ -0.23
CLIP2-207ENST00000487447 IKQ13123 557 aaPredicted RBP13.6□□□□□ -0.23
CLIP2-207ENST00000487447 MAP2K5Q13163 448 aa13.6□□□□□ -0.23
CLIP2-207ENST00000487447 SLC35G1Q2M3R5 365 aa13.6□□□□□ -0.23
CLIP2-207ENST00000487447 CHST13Q8NET6 341 aa13.6□□□□□ -0.23
CLIP2-207ENST00000487447 CHMP4CQ96CF2 233 aa13.6□□□□□ -0.23
CLIP2-207ENST00000487447 LRRC2Q9BYS8 371 aa13.6□□□□□ -0.23
CLIP2-207ENST00000487447 RIOX1Q9H6W3 641 aa13.6□□□□□ -0.23
CLIP2-207ENST00000487447 JMJD4Q9H9V9 463 aa13.6□□□□□ -0.23
CLIP2-207ENST00000487447 RAVER2Q9HCJ3 691 aaKnown RBP13.6□□□□□ -0.23
CLIP2-207ENST00000487447 CENPFP49454 3210 aa13.6□□□□□ -0.23
CLIP2-207ENST00000487447 LRRC37A2A6NM11 1700 aa13.59□□□□□ -0.23
CLIP2-207ENST00000487447 DNAJC25-GNG10A0A024R161 153 aa13.59□□□□□ -0.23
CLIP2-207ENST00000487447 CCDC69A6NI79 296 aa13.59□□□□□ -0.23
CLIP2-207ENST00000487447 KLRF2D3W0D1 207 aa13.59□□□□□ -0.23
CLIP2-207ENST00000487447 CPA1P15085 419 aa13.59□□□□□ -0.23
CLIP2-207ENST00000487447 RGS2P41220 211 aa13.59□□□□□ -0.23
CLIP2-207ENST00000487447 PLS1Q14651 629 aa13.59□□□□□ -0.23
CLIP2-207ENST00000487447 APOA5Q6Q788 366 aa13.59□□□□□ -0.23
CLIP2-207ENST00000487447 SAMD1Q6SPF0 538 aaPredicted RBP13.59□□□□□ -0.23
CLIP2-207ENST00000487447 RUFY3Q7L099 469 aa13.59□□□□□ -0.23
CLIP2-207ENST00000487447 NCAPG2Q86XI2 1143 aa13.59□□□□□ -0.23
CLIP2-207ENST00000487447 ADGRF4Q8IZF3 695 aa13.59□□□□□ -0.23
CLIP2-207ENST00000487447 CPXCR1Q8N123 301 aa13.59□□□□□ -0.23
CLIP2-207ENST00000487447 RAET1EQ8TD07 263 aa13.59□□□□□ -0.23
CLIP2-207ENST00000487447 AGBL1Q96MI9 1066 aa13.59□□□□□ -0.23
CLIP2-207ENST00000487447 TCEANC2Q96MN5 208 aa13.59□□□□□ -0.23
CLIP2-207ENST00000487447 APBA2Q99767 749 aa13.59□□□□□ -0.23
CLIP2-207ENST00000487447 UBA5Q9GZZ9 404 aa13.59□□□□□ -0.23
CLIP2-207ENST00000487447 MAF1Q9H063 256 aa13.59□□□□□ -0.23
CLIP2-207ENST00000487447 CPVLQ9H3G5 476 aa13.59□□□□□ -0.23
CLIP2-207ENST00000487447 FBXO40Q9UH90 709 aa13.59□□□□□ -0.23
CLIP2-207ENST00000487447 ISY1Q9ULR0 285 aaKnown RBP13.59□□□□□ -0.23
CLIP2-207ENST00000487447 IVNS1ABPQ9Y6Y0 642 aa13.59□□□□□ -0.23
CLIP2-207ENST00000487447 FRMPD3Q5JV73 1810 aa13.58□□□□□ -0.24
CLIP2-207ENST00000487447 CYTH3O43739 400 aa13.58□□□□□ -0.24
CLIP2-207ENST00000487447 ADCY3O60266 1144 aa13.58□□□□□ -0.24
CLIP2-207ENST00000487447 FCER1AP12319 257 aa13.58□□□□□ -0.24
CLIP2-207ENST00000487447 CASTP20810 708 aaKnown RBP13.58□□□□□ -0.24
CLIP2-207ENST00000487447 ADORA2AP29274 412 aa13.58□□□□□ -0.24
CLIP2-207ENST00000487447 GRK4P32298 578 aa13.58□□□□□ -0.24
CLIP2-207ENST00000487447 CCAR1Q8IX12 1150 aaKnown RBP13.58□□□□□ -0.24
CLIP2-207ENST00000487447 TRMT44Q8IYL2 757 aaKnown RBP13.58□□□□□ -0.24
CLIP2-207ENST00000487447 ZNF333Q96JL9 665 aa13.58□□□□□ -0.24
CLIP2-207ENST00000487447 TMEM106CQ9BVX2 250 aa13.58□□□□□ -0.24
CLIP2-207ENST00000487447 SPZ1Q9BXG8 430 aa13.58□□□□□ -0.24
CLIP2-207ENST00000487447 ALDH8A1Q9H2A2 487 aaPredicted RBP13.58□□□□□ -0.24
CLIP2-207ENST00000487447 BRPF3Q9ULD4 1205 aa13.58□□□□□ -0.24
CLIP2-207ENST00000487447 DIS3Q9Y2L1 958 aaKnown RBP13.58□□□□□ -0.24
CLIP2-207ENST00000487447 SLC12A7Q9Y666 1083 aa13.58□□□□□ -0.24
CLIP2-207ENST00000487447 KIF5BP33176 963 aa13.57□□□□□ -0.24
CLIP2-207ENST00000487447 SNAP25P60880 206 aa13.57□□□□□ -0.24
CLIP2-207ENST00000487447 CDC37Q16543 378 aaPredicted RBP13.57□□□□□ -0.24
CLIP2-207ENST00000487447 ZNF792Q3KQV3 632 aa13.57□□□□□ -0.24
CLIP2-207ENST00000487447 SLC9C1Q4G0N8 1177 aa13.57□□□□□ -0.24
CLIP2-207ENST00000487447 MAP3K21Q5TCX8 1036 aa13.57□□□□□ -0.24
CLIP2-207ENST00000487447 NFXL1Q6ZNB6 911 aa13.57□□□□□ -0.24
CLIP2-207ENST00000487447 Q6ZUG5 572 aa13.57□□□□□ -0.24
CLIP2-207ENST00000487447 NBPF11Q86T75 865 aa13.57□□□□□ -0.24
CLIP2-207ENST00000487447 CTCFLQ8NI51 663 aaPredicted RBP13.57□□□□□ -0.24
CLIP2-207ENST00000487447 TRIB2Q92519 343 aa13.57□□□□□ -0.24
CLIP2-207ENST00000487447 MMP19Q99542 508 aa13.57□□□□□ -0.24
CLIP2-207ENST00000487447 LZTS2Q9BRK4 669 aa13.57□□□□□ -0.24
CLIP2-207ENST00000487447 MYL10Q9BUA6 226 aa13.57□□□□□ -0.24
CLIP2-207ENST00000487447 ACAD9Q9H845 621 aa13.57□□□□□ -0.24
CLIP2-207ENST00000487447 RNF146Q9NTX7 359 aa13.57□□□□□ -0.24
CLIP2-207ENST00000487447 CCPG1Q9ULG6 757 aa13.57□□□□□ -0.24
CLIP2-207ENST00000487447 CTDP1Q9Y5B0 961 aaPredicted RBP13.57□□□□□ -0.24
CLIP2-207ENST00000487447 CYP46A1Q9Y6A2 500 aa13.57□□□□□ -0.24
CLIP2-207ENST00000487447 KIAA0100Q14667 2235 aaKnown RBP13.57□□□□□ -0.24
CLIP2-207ENST00000487447 COBLO75128 1261 aa13.56□□□□□ -0.24
CLIP2-207ENST00000487447 HMGCRP04035 888 aa13.56□□□□□ -0.24
CLIP2-207ENST00000487447 CYP2B6P20813 491 aa13.56□□□□□ -0.24
CLIP2-207ENST00000487447 GNAQP50148 359 aa13.56□□□□□ -0.24
CLIP2-207ENST00000487447 GHRHRQ02643 423 aa13.56□□□□□ -0.24
CLIP2-207ENST00000487447 TOB2Q14106 344 aaPredicted RBP13.56□□□□□ -0.24
CLIP2-207ENST00000487447 KCTD2Q14681 263 aa13.56□□□□□ -0.24
CLIP2-207ENST00000487447 PPP2R5BQ15173 497 aa13.56□□□□□ -0.24
CLIP2-207ENST00000487447 QRICH1Q2TAL8 776 aa13.56□□□□□ -0.24
CLIP2-207ENST00000487447 WDR78Q5VTH9 848 aa13.56□□□□□ -0.24
CLIP2-207ENST00000487447 OLFML2BQ68BL8 750 aa13.56□□□□□ -0.24
CLIP2-207ENST00000487447 CCDC174Q6PII3 467 aa13.56□□□□□ -0.24
CLIP2-207ENST00000487447 TMTC3Q6ZXV5 915 aa13.56□□□□□ -0.24
CLIP2-207ENST00000487447 FANCBQ8NB91 859 aa13.56□□□□□ -0.24
CLIP2-207ENST00000487447 NPLOC4Q8TAT6 608 aa13.56□□□□□ -0.24
CLIP2-207ENST00000487447 SH3TC2Q8TF17 1288 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms