RNA–Protein interactions for RNA: ENST00000487275.1

ZNF541-204, Transcript of zinc finger protein 541, humanhuman

TSL 3

Gene ZNF541, Length 579 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-204ENST00000487275 GPT2Q8TD30 523 aa9.2□□□□□ -0.94
ZNF541-204ENST00000487275 TNFRSF25Q93038 417 aa9.2□□□□□ -0.94
ZNF541-204ENST00000487275 KIFC2Q96AC6 838 aa9.2□□□□□ -0.94
ZNF541-204ENST00000487275 AMNQ9BXJ7 453 aa9.2□□□□□ -0.94
ZNF541-204ENST00000487275 GLT8D2Q9H1C3 349 aa9.2□□□□□ -0.94
ZNF541-204ENST00000487275 TMOD4Q9NZQ9 345 aa9.2□□□□□ -0.94
ZNF541-204ENST00000487275 CEP131Q9UPN4 1083 aa9.2□□□□□ -0.94
ZNF541-204ENST00000487275 PPP1R11O60927 126 aaPredicted RBP9.19□□□□□ -0.94
ZNF541-204ENST00000487275 BMP15O95972 392 aa9.19□□□□□ -0.94
ZNF541-204ENST00000487275 VCAM1P19320 739 aa9.19□□□□□ -0.94
ZNF541-204ENST00000487275 ME1P48163 572 aa9.19□□□□□ -0.94
ZNF541-204ENST00000487275 TRAPPC10P48553 1259 aa9.19□□□□□ -0.94
ZNF541-204ENST00000487275 MRPL12P52815 198 aaKnown RBP9.19□□□□□ -0.94
ZNF541-204ENST00000487275 SNAP25P60880 206 aa9.19□□□□□ -0.94
ZNF541-204ENST00000487275 EARS2Q5JPH6 523 aaKnown RBP9.19□□□□□ -0.94
ZNF541-204ENST00000487275 TTC38Q5R3I4 469 aa9.19□□□□□ -0.94
ZNF541-204ENST00000487275 MAP1SQ66K74 1059 aaPredicted RBP9.19□□□□□ -0.94
ZNF541-204ENST00000487275 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.19□□□□□ -0.94
ZNF541-204ENST00000487275 KRT25Q7Z3Z0 450 aa9.19□□□□□ -0.94
ZNF541-204ENST00000487275 ANKRD13AQ8IZ07 590 aa9.19□□□□□ -0.94
ZNF541-204ENST00000487275 REXO1Q8N1G1 1221 aaKnown RBP9.19□□□□□ -0.94
ZNF541-204ENST00000487275 RASGRP4Q8TDF6 673 aa9.19□□□□□ -0.94
ZNF541-204ENST00000487275 CUL5Q93034 780 aa9.19□□□□□ -0.94
ZNF541-204ENST00000487275 SYAP1Q96A49 352 aaPredicted RBP9.19□□□□□ -0.94
ZNF541-204ENST00000487275 SLF1Q9BQI6 1058 aa9.19□□□□□ -0.94
ZNF541-204ENST00000487275 TANGO6Q9C0B7 1094 aa9.19□□□□□ -0.94
ZNF541-204ENST00000487275 RANBP17Q9H2T7 1088 aaKnown RBP9.19□□□□□ -0.94
ZNF541-204ENST00000487275 RPAP3Q9H6T3 665 aaPredicted RBP9.19□□□□□ -0.94
ZNF541-204ENST00000487275 EMILIN3Q9NT22 766 aa9.19□□□□□ -0.94
ZNF541-204ENST00000487275 PCDHA6Q9UN73 950 aa9.19□□□□□ -0.94
ZNF541-204ENST00000487275 CTDP1Q9Y5B0 961 aaPredicted RBP9.19□□□□□ -0.94
ZNF541-204ENST00000487275 PCDHA8Q9Y5H6 950 aa9.19□□□□□ -0.94
ZNF541-204ENST00000487275 PCDHA1Q9Y5I3 950 aa9.19□□□□□ -0.94
ZNF541-204ENST00000487275 SNCAIPQ9Y6H5 919 aa9.19□□□□□ -0.94
ZNF541-204ENST00000487275 POLR2AP24928 1970 aaKnown RBP9.19□□□□□ -0.94
ZNF541-204ENST00000487275 FAM205CA6NFA0 338 aa9.18□□□□□ -0.94
ZNF541-204ENST00000487275 M0R2N6 131 aa9.18□□□□□ -0.94
ZNF541-204ENST00000487275 PPP6R2O75170 966 aa9.18□□□□□ -0.94
ZNF541-204ENST00000487275 FLOT1O75955 427 aa9.18□□□□□ -0.94
ZNF541-204ENST00000487275 POTEIP0CG38 1075 aa9.18□□□□□ -0.94
ZNF541-204ENST00000487275 POTEJP0CG39 1038 aa9.18□□□□□ -0.94
ZNF541-204ENST00000487275 TOB1P50616 345 aaPredicted RBP9.18□□□□□ -0.94
ZNF541-204ENST00000487275 HMGCS2P54868 508 aa9.18□□□□□ -0.94
ZNF541-204ENST00000487275 SLC39A14Q15043 492 aa9.18□□□□□ -0.94
ZNF541-204ENST00000487275 NONOQ15233 471 aaKnown RBP eCLIP9.18□□□□□ -0.94
ZNF541-204ENST00000487275 MAP3K11Q16584 847 aa9.18□□□□□ -0.94
ZNF541-204ENST00000487275 USH1GQ495M9 461 aa9.18□□□□□ -0.94
ZNF541-204ENST00000487275 JAKMIP3Q5VZ66 844 aa9.18□□□□□ -0.94
ZNF541-204ENST00000487275 CAVIN1Q6NZI2 390 aaKnown RBP9.18□□□□□ -0.94
ZNF541-204ENST00000487275 CCDC174Q6PII3 467 aa9.18□□□□□ -0.94
ZNF541-204ENST00000487275 LDHDQ86WU2 507 aa9.18□□□□□ -0.94
ZNF541-204ENST00000487275 PRPF38AQ8NAV1 312 aaKnown RBP9.18□□□□□ -0.94
ZNF541-204ENST00000487275 RBM46Q8TBY0 533 aaKnown RBP9.18□□□□□ -0.94
ZNF541-204ENST00000487275 PGBD1Q96JS3 809 aa9.18□□□□□ -0.94
ZNF541-204ENST00000487275 C12orf42Q96LP6 360 aa9.18□□□□□ -0.94
ZNF541-204ENST00000487275 GZF1Q9H116 711 aaPredicted RBP9.18□□□□□ -0.94
ZNF541-204ENST00000487275 PSTPIP2Q9H939 334 aa9.18□□□□□ -0.94
ZNF541-204ENST00000487275 ZNF408Q9H9D4 720 aa9.18□□□□□ -0.94
ZNF541-204ENST00000487275 ELP3Q9H9T3 547 aa9.18□□□□□ -0.94
ZNF541-204ENST00000487275 RIC8AQ9NPQ8 531 aa9.18□□□□□ -0.94
ZNF541-204ENST00000487275 FBXO28Q9NVF7 368 aa9.18□□□□□ -0.94
ZNF541-204ENST00000487275 BIN2Q9UBW5 565 aaPredicted RBP9.18□□□□□ -0.94
ZNF541-204ENST00000487275 MYH15Q9Y2K3 1946 aa9.18□□□□□ -0.94
ZNF541-204ENST00000487275 AFG3L2Q9Y4W6 797 aa9.18□□□□□ -0.94
ZNF541-204ENST00000487275 TCHHQ07283 1943 aa9.17□□□□□ -0.94
ZNF541-204ENST00000487275 ADAMTS3O15072 1205 aa9.17□□□□□ -0.94
ZNF541-204ENST00000487275 ZBED4O75132 1171 aa9.17□□□□□ -0.94
ZNF541-204ENST00000487275 MARCKSP29966 332 aaPredicted RBP9.17□□□□□ -0.94
ZNF541-204ENST00000487275 PPATQ06203 517 aa9.17□□□□□ -0.94
ZNF541-204ENST00000487275 DGKZQ13574 1117 aa9.17□□□□□ -0.94
ZNF541-204ENST00000487275 PTPAQ15257 358 aa9.17□□□□□ -0.94
ZNF541-204ENST00000487275 ZNF174Q15697 407 aa9.17□□□□□ -0.94
ZNF541-204ENST00000487275 NOM1Q5C9Z4 860 aaKnown RBP9.17□□□□□ -0.94
ZNF541-204ENST00000487275 SH3D19Q5HYK7 790 aa9.17□□□□□ -0.94
ZNF541-204ENST00000487275 MOB2Q70IA6 237 aa9.17□□□□□ -0.94
ZNF541-204ENST00000487275 ERO1BQ86YB8 467 aa9.17□□□□□ -0.94
ZNF541-204ENST00000487275 ZNF526Q8TF50 670 aaPredicted RBP9.17□□□□□ -0.94
ZNF541-204ENST00000487275 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.17□□□□□ -0.94
ZNF541-204ENST00000487275 TMEM260Q9NX78 707 aa9.17□□□□□ -0.94
ZNF541-204ENST00000487275 PPP1R9AQ9ULJ8 1098 aa9.17□□□□□ -0.94
ZNF541-204ENST00000487275 PCDHA7Q9UN72 937 aa9.17□□□□□ -0.94
ZNF541-204ENST00000487275 MRPL11Q9Y3B7 192 aaKnown RBP9.17□□□□□ -0.94
ZNF541-204ENST00000487275 PCDHB6Q9Y5E3 794 aa9.17□□□□□ -0.94
ZNF541-204ENST00000487275 ABCB11O95342 1321 aa9.16□□□□□ -0.94
ZNF541-204ENST00000487275 A0A1W2PQ27 194 aa9.16□□□□□ -0.94
ZNF541-204ENST00000487275 A0A1W2PQ64 194 aa9.16□□□□□ -0.94
ZNF541-204ENST00000487275 A0A1W2PQD8 194 aa9.16□□□□□ -0.94
ZNF541-204ENST00000487275 SPDYE5A6NIY4 337 aa9.16□□□□□ -0.94
ZNF541-204ENST00000487275 TRAF5O00463 557 aa9.16□□□□□ -0.94
ZNF541-204ENST00000487275 CUTAO60888 179 aa9.16□□□□□ -0.94
ZNF541-204ENST00000487275 ICAM1P05362 532 aa9.16□□□□□ -0.94
ZNF541-204ENST00000487275 FDX1P10109 184 aa9.16□□□□□ -0.94
ZNF541-204ENST00000487275 UBE2SQ16763 222 aa9.16□□□□□ -0.94
ZNF541-204ENST00000487275 INF2Q27J81 1249 aa9.16□□□□□ -0.94
ZNF541-204ENST00000487275 ADALQ6DHV7 355 aa9.16□□□□□ -0.94
ZNF541-204ENST00000487275 MCTP2Q6DN12 878 aa9.16□□□□□ -0.94
ZNF541-204ENST00000487275 CCDC73Q6ZRK6 1079 aa9.16□□□□□ -0.94
ZNF541-204ENST00000487275 CCAR1Q8IX12 1150 aaKnown RBP9.16□□□□□ -0.94
ZNF541-204ENST00000487275 KRI1Q8N9T8 703 aaKnown RBP9.16□□□□□ -0.94
ZNF541-204ENST00000487275 FSIP1Q8NA03 581 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms