RNA–Protein interactions for RNA: ENST00000487241.1

TRIM5-210, Transcript of tripartite motif containing 5, humanhuman

TSL 1 (best)

Gene TRIM5, Length 756 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM5-210ENST00000487241 PDE4DQ08499 809 aa9.37□□□□□ -0.91
TRIM5-210ENST00000487241 HDAC1Q13547 482 aaPredicted RBP9.37□□□□□ -0.91
TRIM5-210ENST00000487241 GRB14Q14449 540 aa9.37□□□□□ -0.91
TRIM5-210ENST00000487241 PLS1Q14651 629 aa9.37□□□□□ -0.91
TRIM5-210ENST00000487241 CENPQQ7L2Z9 268 aaPredicted RBP9.37□□□□□ -0.91
TRIM5-210ENST00000487241 DPP9Q86TI2 863 aa9.37□□□□□ -0.91
TRIM5-210ENST00000487241 IFNL3Q8IZI9 196 aa9.37□□□□□ -0.91
TRIM5-210ENST00000487241 ATG4CQ96DT6 458 aa9.37□□□□□ -0.91
TRIM5-210ENST00000487241 SEC62Q99442 399 aaKnown RBP9.37□□□□□ -0.91
TRIM5-210ENST00000487241 MOV10L1Q9BXT6 1211 aaKnown RBP9.37□□□□□ -0.91
TRIM5-210ENST00000487241 NACAP1Q9BZK3 213 aa9.37□□□□□ -0.91
TRIM5-210ENST00000487241 SPATC1LQ9H0A9 340 aa9.37□□□□□ -0.91
TRIM5-210ENST00000487241 EPB41L4AQ9HCS5 686 aaPredicted RBP9.37□□□□□ -0.91
TRIM5-210ENST00000487241 PARP14Q460N5 1801 aa9.37□□□□□ -0.91
TRIM5-210ENST00000487241 SALL3Q9BXA9 1300 aa9.36□□□□□ -0.91
TRIM5-210ENST00000487241 COL11A1P12107 1806 aaPredicted RBP9.36□□□□□ -0.91
TRIM5-210ENST00000487241 POTEB3A0JP26 581 aa9.36□□□□□ -0.91
TRIM5-210ENST00000487241 MSCO60682 206 aa9.36□□□□□ -0.91
TRIM5-210ENST00000487241 PRDM1O75626 825 aa9.36□□□□□ -0.91
TRIM5-210ENST00000487241 ERCC3P19447 782 aa9.36□□□□□ -0.91
TRIM5-210ENST00000487241 PSEN2P49810 448 aa9.36□□□□□ -0.91
TRIM5-210ENST00000487241 ZMYM1Q5SVZ6 1142 aa9.36□□□□□ -0.91
TRIM5-210ENST00000487241 POTEBQ6S5H4 581 aa9.36□□□□□ -0.91
TRIM5-210ENST00000487241 NCAPG2Q86XI2 1143 aa9.36□□□□□ -0.91
TRIM5-210ENST00000487241 ZNF444Q8N0Y2 327 aaPredicted RBP9.36□□□□□ -0.91
TRIM5-210ENST00000487241 SHCBP1Q8NEM2 672 aa9.36□□□□□ -0.91
TRIM5-210ENST00000487241 FAM161BQ96MY7 647 aa9.36□□□□□ -0.91
TRIM5-210ENST00000487241 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.36□□□□□ -0.91
TRIM5-210ENST00000487241 NAPBQ9H115 298 aa9.36□□□□□ -0.91
TRIM5-210ENST00000487241 MROH8Q9H579 483 aa9.36□□□□□ -0.91
TRIM5-210ENST00000487241 DDX20Q9UHI6 824 aaKnown RBP9.36□□□□□ -0.91
TRIM5-210ENST00000487241 MYH4Q9Y623 1939 aa9.36□□□□□ -0.91
TRIM5-210ENST00000487241 ZNF236Q9UL36 1845 aa9.35□□□□□ -0.91
TRIM5-210ENST00000487241 STRNO43815 780 aa9.35□□□□□ -0.91
TRIM5-210ENST00000487241 SLC3A2P08195 630 aaKnown RBP9.35□□□□□ -0.91
TRIM5-210ENST00000487241 HOXC6P09630 235 aa9.35□□□□□ -0.91
TRIM5-210ENST00000487241 ADORA2AP29274 412 aa9.35□□□□□ -0.91
TRIM5-210ENST00000487241 CYP2C19P33261 490 aa9.35□□□□□ -0.91
TRIM5-210ENST00000487241 PDE1AP54750 535 aa9.35□□□□□ -0.91
TRIM5-210ENST00000487241 PDE4BQ07343 736 aa9.35□□□□□ -0.91
TRIM5-210ENST00000487241 AAMPQ13685 434 aa9.35□□□□□ -0.91
TRIM5-210ENST00000487241 FAM83BQ5T0W9 1011 aa9.35□□□□□ -0.91
TRIM5-210ENST00000487241 SKAP1Q86WV1 359 aa9.35□□□□□ -0.91
TRIM5-210ENST00000487241 ARRDC4Q8NCT1 418 aa9.35□□□□□ -0.91
TRIM5-210ENST00000487241 NPLOC4Q8TAT6 608 aa9.35□□□□□ -0.91
TRIM5-210ENST00000487241 EVI5LQ96CN4 794 aa9.35□□□□□ -0.91
TRIM5-210ENST00000487241 FAM122AQ96E09 287 aa9.35□□□□□ -0.91
TRIM5-210ENST00000487241 FBXO28Q9NVF7 368 aa9.35□□□□□ -0.91
TRIM5-210ENST00000487241 SLC5A4Q9NY91 659 aa9.35□□□□□ -0.91
TRIM5-210ENST00000487241 FLRT1Q9NZU1 646 aa9.35□□□□□ -0.91
TRIM5-210ENST00000487241 NYAP2Q9P242 653 aa9.35□□□□□ -0.91
TRIM5-210ENST00000487241 ATP11BQ9Y2G3 1177 aa9.35□□□□□ -0.91
TRIM5-210ENST00000487241 ALPK3Q96L96 1907 aa9.35□□□□□ -0.91
TRIM5-210ENST00000487241 FRMPD3Q5JV73 1810 aa9.34□□□□□ -0.91
TRIM5-210ENST00000487241 KBTBD13C9JR72 458 aa9.34□□□□□ -0.91
TRIM5-210ENST00000487241 F5H6K3 240 aa9.34□□□□□ -0.91
TRIM5-210ENST00000487241 ARHGAP33O14559 1287 aa9.34□□□□□ -0.91
TRIM5-210ENST00000487241 SLC25A27O95847 323 aa9.34□□□□□ -0.91
TRIM5-210ENST00000487241 TSPY3P0CV98 308 aa9.34□□□□□ -0.91
TRIM5-210ENST00000487241 TSPY8P0CW00 308 aa9.34□□□□□ -0.91
TRIM5-210ENST00000487241 RTP1P59025 263 aa9.34□□□□□ -0.91
TRIM5-210ENST00000487241 KLRC3Q07444 240 aa9.34□□□□□ -0.91
TRIM5-210ENST00000487241 PPARAQ07869 468 aa9.34□□□□□ -0.91
TRIM5-210ENST00000487241 TMEM132BQ14DG7 1078 aa9.34□□□□□ -0.91
TRIM5-210ENST00000487241 GJC2Q5T442 439 aaPredicted RBP9.34□□□□□ -0.91
TRIM5-210ENST00000487241 ZNF697Q5TEC3 545 aa9.34□□□□□ -0.91
TRIM5-210ENST00000487241 ANO1Q5XXA6 986 aa9.34□□□□□ -0.91
TRIM5-210ENST00000487241 CCDC129Q6ZRS4 1044 aa9.34□□□□□ -0.91
TRIM5-210ENST00000487241 ZNF687Q8N1G0 1237 aa9.34□□□□□ -0.91
TRIM5-210ENST00000487241 HS3ST6Q96QI5 342 aa9.34□□□□□ -0.91
TRIM5-210ENST00000487241 SLF1Q9BQI6 1058 aa9.34□□□□□ -0.91
TRIM5-210ENST00000487241 LNPKQ9C0E8 428 aa9.34□□□□□ -0.91
TRIM5-210ENST00000487241 RWDD1Q9H446 243 aaPredicted RBP9.34□□□□□ -0.91
TRIM5-210ENST00000487241 PRDM5Q9NQX1 630 aaPredicted RBP9.34□□□□□ -0.91
TRIM5-210ENST00000487241 CLIP2Q9UDT6 1046 aa9.34□□□□□ -0.91
TRIM5-210ENST00000487241 PPP1R9AQ9ULJ8 1098 aa9.34□□□□□ -0.91
TRIM5-210ENST00000487241 ADAMTS5Q9UNA0 930 aa9.34□□□□□ -0.91
TRIM5-210ENST00000487241 ADGRG1Q9Y653 693 aa9.34□□□□□ -0.91
TRIM5-210ENST00000487241 ZNFX1Q9P2E3 1918 aaKnown RBP9.34□□□□□ -0.91
TRIM5-210ENST00000487241 IGKV6D-41A0A0C4DH26 115 aa9.33□□□□□ -0.92
TRIM5-210ENST00000487241 TRIM6-TRIM34B2RNG4 842 aa9.33□□□□□ -0.92
TRIM5-210ENST00000487241 DNM1LO00429 736 aa9.33□□□□□ -0.92
TRIM5-210ENST00000487241 VWA5AO00534 786 aa9.33□□□□□ -0.92
TRIM5-210ENST00000487241 TTLL1O95922 423 aa9.33□□□□□ -0.92
TRIM5-210ENST00000487241 NDUFB10O96000 172 aa9.33□□□□□ -0.92
TRIM5-210ENST00000487241 IGHDP01880 384 aa9.33□□□□□ -0.92
TRIM5-210ENST00000487241 FCER1AP12319 257 aa9.33□□□□□ -0.92
TRIM5-210ENST00000487241 STAT3P40763 770 aa9.33□□□□□ -0.92
TRIM5-210ENST00000487241 AMHR2Q16671 573 aa9.33□□□□□ -0.92
TRIM5-210ENST00000487241 RIOX2Q8IUF8 465 aa9.33□□□□□ -0.92
TRIM5-210ENST00000487241 ABRAQ8N0Z2 381 aa9.33□□□□□ -0.92
TRIM5-210ENST00000487241 CEP95Q96GE4 821 aa9.33□□□□□ -0.92
TRIM5-210ENST00000487241 PHOX2BQ99453 314 aa9.33□□□□□ -0.92
TRIM5-210ENST00000487241 MMP19Q99542 508 aa9.33□□□□□ -0.92
TRIM5-210ENST00000487241 NUP88Q99567 741 aaPredicted RBP9.33□□□□□ -0.92
TRIM5-210ENST00000487241 MTMR4Q9NYA4 1195 aa9.33□□□□□ -0.92
TRIM5-210ENST00000487241 COBLO75128 1261 aa9.32□□□□□ -0.92
TRIM5-210ENST00000487241 OATP04181 439 aa9.32□□□□□ -0.92
TRIM5-210ENST00000487241 CYBAP13498 195 aa9.32□□□□□ -0.92
TRIM5-210ENST00000487241 COPB2P35606 906 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms