RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 ZBTB5O15062 677 aa8.06□□□□□ -1.12
SF3A3-206ENST00000487062 CMA1P23946 247 aa8.06□□□□□ -1.12
SF3A3-206ENST00000487062 LMOD1P29536 600 aaPredicted RBP8.06□□□□□ -1.12
SF3A3-206ENST00000487062 CAP2P40123 477 aa8.06□□□□□ -1.12
SF3A3-206ENST00000487062 TOB1P50616 345 aaPredicted RBP8.06□□□□□ -1.12
SF3A3-206ENST00000487062 KLRC3Q07444 240 aa8.06□□□□□ -1.12
SF3A3-206ENST00000487062 TRAF1Q13077 416 aa8.06□□□□□ -1.12
SF3A3-206ENST00000487062 PTPAQ15257 358 aa8.06□□□□□ -1.12
SF3A3-206ENST00000487062 MAP3K11Q16584 847 aa8.06□□□□□ -1.12
SF3A3-206ENST00000487062 SLC35G1Q2M3R5 365 aa8.06□□□□□ -1.12
SF3A3-206ENST00000487062 KCTD1Q719H9 257 aa8.06□□□□□ -1.12
SF3A3-206ENST00000487062 KRT25Q7Z3Z0 450 aa8.06□□□□□ -1.12
SF3A3-206ENST00000487062 ADGRF4Q8IZF3 695 aa8.06□□□□□ -1.12
SF3A3-206ENST00000487062 TNFRSF25Q93038 417 aa8.06□□□□□ -1.12
SF3A3-206ENST00000487062 SHISA4Q96DD7 197 aa8.06□□□□□ -1.12
SF3A3-206ENST00000487062 ZMYND12Q9H0C1 365 aa8.06□□□□□ -1.12
SF3A3-206ENST00000487062 GLT8D2Q9H1C3 349 aa8.06□□□□□ -1.12
SF3A3-206ENST00000487062 CPVLQ9H3G5 476 aa8.06□□□□□ -1.12
SF3A3-206ENST00000487062 TSPY26PQ9H489 355 aa8.06□□□□□ -1.12
SF3A3-206ENST00000487062 CLSTN2Q9H4D0 955 aa8.06□□□□□ -1.12
SF3A3-206ENST00000487062 JMJD4Q9H9V9 463 aa8.06□□□□□ -1.12
SF3A3-206ENST00000487062 GRPEL1Q9HAV7 217 aa8.06□□□□□ -1.12
SF3A3-206ENST00000487062 RNF181Q9P0P0 153 aa8.06□□□□□ -1.12
SF3A3-206ENST00000487062 PGAP2Q9UHJ9 254 aa8.06□□□□□ -1.12
SF3A3-206ENST00000487062 PPP2R3BQ9Y5P8 575 aa8.06□□□□□ -1.12
SF3A3-206ENST00000487062 DOCK1Q14185 1865 aa8.06□□□□□ -1.12
SF3A3-206ENST00000487062 HAX1O00165 279 aa8.05□□□□□ -1.12
SF3A3-206ENST00000487062 NR1I2O75469 434 aa8.05□□□□□ -1.12
SF3A3-206ENST00000487062 BMP3P12645 472 aa8.05□□□□□ -1.12
SF3A3-206ENST00000487062 VEGFAP15692 232 aaPredicted RBP8.05□□□□□ -1.12
SF3A3-206ENST00000487062 ATP2B1P20020 1258 aa8.05□□□□□ -1.12
SF3A3-206ENST00000487062 MARCKSP29966 332 aaPredicted RBP8.05□□□□□ -1.12
SF3A3-206ENST00000487062 IKQ13123 557 aaPredicted RBP8.05□□□□□ -1.12
SF3A3-206ENST00000487062 RRP1BQ14684 758 aaKnown RBP8.05□□□□□ -1.12
SF3A3-206ENST00000487062 NPY5RQ15761 445 aa8.05□□□□□ -1.12
SF3A3-206ENST00000487062 TTC38Q5R3I4 469 aa8.05□□□□□ -1.12
SF3A3-206ENST00000487062 AXDND1Q5T1B0 1012 aaPredicted RBP8.05□□□□□ -1.12
SF3A3-206ENST00000487062 PIK3AP1Q6ZUJ8 805 aa8.05□□□□□ -1.12
SF3A3-206ENST00000487062 MIGA2Q7L4E1 593 aa8.05□□□□□ -1.12
SF3A3-206ENST00000487062 RASGRP2Q7LDG7 609 aa8.05□□□□□ -1.12
SF3A3-206ENST00000487062 SIAH1Q8IUQ4 282 aa8.05□□□□□ -1.12
SF3A3-206ENST00000487062 ANP32BQ92688 251 aaKnown RBP8.05□□□□□ -1.12
SF3A3-206ENST00000487062 MTMR8Q96EF0 704 aa8.05□□□□□ -1.12
SF3A3-206ENST00000487062 ZNF341Q9BYN7 854 aa8.05□□□□□ -1.12
SF3A3-206ENST00000487062 DEFB129Q9H1M3 183 aa8.05□□□□□ -1.12
SF3A3-206ENST00000487062 FAM13BQ9NYF5 915 aa8.05□□□□□ -1.12
SF3A3-206ENST00000487062 TMX2Q9Y320 296 aa8.05□□□□□ -1.12
SF3A3-206ENST00000487062 PCDHB6Q9Y5E3 794 aa8.05□□□□□ -1.12
SF3A3-206ENST00000487062 PITPNM2Q9BZ72 1349 aa8.04□□□□□ -1.12
SF3A3-206ENST00000487062 A0A1B0GVL5 298 aa8.04□□□□□ -1.12
SF3A3-206ENST00000487062 TMEM232C9JQI7 657 aa8.04□□□□□ -1.12
SF3A3-206ENST00000487062 M0R2N6 131 aa8.04□□□□□ -1.12
SF3A3-206ENST00000487062 CTNND1O60716 968 aaKnown RBP8.04□□□□□ -1.12
SF3A3-206ENST00000487062 NDUFB10O96000 172 aa8.04□□□□□ -1.12
SF3A3-206ENST00000487062 EGFRP00533 1210 aa8.04□□□□□ -1.12
SF3A3-206ENST00000487062 CCDC192P0DO97 292 aa8.04□□□□□ -1.12
SF3A3-206ENST00000487062 PTPREP23469 700 aa8.04□□□□□ -1.12
SF3A3-206ENST00000487062 SLC16A2P36021 539 aa8.04□□□□□ -1.12
SF3A3-206ENST00000487062 ADCY7P51828 1080 aa8.04□□□□□ -1.12
SF3A3-206ENST00000487062 MRPL12P52815 198 aaKnown RBP8.04□□□□□ -1.12
SF3A3-206ENST00000487062 JAG1P78504 1218 aa8.04□□□□□ -1.12
SF3A3-206ENST00000487062 ORC2Q13416 577 aaPredicted RBP8.04□□□□□ -1.12
SF3A3-206ENST00000487062 NONOQ15233 471 aaKnown RBP eCLIP8.04□□□□□ -1.12
SF3A3-206ENST00000487062 SHROOM1Q2M3G4 852 aaPredicted RBP8.04□□□□□ -1.12
SF3A3-206ENST00000487062 PPP1R15BQ5SWA1 713 aa8.04□□□□□ -1.12
SF3A3-206ENST00000487062 SYDE2Q5VT97 1194 aa8.04□□□□□ -1.12
SF3A3-206ENST00000487062 ANGEL2Q5VTE6 544 aaKnown RBP8.04□□□□□ -1.12
SF3A3-206ENST00000487062 RESP18Q5W5W9 173 aa8.04□□□□□ -1.12
SF3A3-206ENST00000487062 MCTP2Q6DN12 878 aa8.04□□□□□ -1.12
SF3A3-206ENST00000487062 TTBK2Q6IQ55 1244 aa8.04□□□□□ -1.12
SF3A3-206ENST00000487062 TYW1BQ6NUM6 668 aa8.04□□□□□ -1.12
SF3A3-206ENST00000487062 DPY19L2Q6NUT2 758 aa8.04□□□□□ -1.12
SF3A3-206ENST00000487062 BTNL9Q6UXG8 535 aa8.04□□□□□ -1.12
SF3A3-206ENST00000487062 GAS2L3Q86XJ1 694 aa8.04□□□□□ -1.12
SF3A3-206ENST00000487062 REXO1Q8N1G1 1221 aaKnown RBP8.04□□□□□ -1.12
SF3A3-206ENST00000487062 ENGASEQ8NFI3 743 aa8.04□□□□□ -1.12
SF3A3-206ENST00000487062 CHURC1Q8WUH1 139 aa8.04□□□□□ -1.12
SF3A3-206ENST00000487062 CUL5Q93034 780 aa8.04□□□□□ -1.12
SF3A3-206ENST00000487062 FERMT2Q96AC1 680 aa8.04□□□□□ -1.12
SF3A3-206ENST00000487062 CCDC34Q96HJ3 373 aa8.04□□□□□ -1.12
SF3A3-206ENST00000487062 TIGD1Q96MW7 591 aa8.04□□□□□ -1.12
SF3A3-206ENST00000487062 TEPSINQ96N21 525 aa8.04□□□□□ -1.12
SF3A3-206ENST00000487062 SDF4Q9BRK5 362 aa8.04□□□□□ -1.12
SF3A3-206ENST00000487062 GOLPH3LQ9H4A5 285 aa8.04□□□□□ -1.12
SF3A3-206ENST00000487062 VCPKMTQ9H867 229 aa8.04□□□□□ -1.12
SF3A3-206ENST00000487062 ADARB2Q9NS39 739 aaKnown RBP8.04□□□□□ -1.12
SF3A3-206ENST00000487062 PCDHA6Q9UN73 950 aa8.04□□□□□ -1.12
SF3A3-206ENST00000487062 PCDHA8Q9Y5H6 950 aa8.04□□□□□ -1.12
SF3A3-206ENST00000487062 SRPRBQ9Y5M8 271 aaKnown RBP8.04□□□□□ -1.12
SF3A3-206ENST00000487062 POLR2AP24928 1970 aaKnown RBP8.04□□□□□ -1.12
SF3A3-206ENST00000487062 FAM237AA0A1B0GTK4 181 aa8.03□□□□□ -1.12
SF3A3-206ENST00000487062 A0A1W2PRG0 241 aa8.03□□□□□ -1.12
SF3A3-206ENST00000487062 FAM205CA6NFA0 338 aa8.03□□□□□ -1.12
SF3A3-206ENST00000487062 SPDYE16A6NNV3 312 aaPredicted RBP8.03□□□□□ -1.12
SF3A3-206ENST00000487062 PHF20L1A8MW92 1017 aa8.03□□□□□ -1.12
SF3A3-206ENST00000487062 USP17L10C9JJH3 530 aa8.03□□□□□ -1.12
SF3A3-206ENST00000487062 LAD1O00515 517 aa8.03□□□□□ -1.12
SF3A3-206ENST00000487062 PLA2G6O60733 806 aa8.03□□□□□ -1.12
SF3A3-206ENST00000487062 PFKFB1P16118 471 aa8.03□□□□□ -1.12
SF3A3-206ENST00000487062 YBX3P16989 372 aaKnown RBP eCLIP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms