RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 K7ESM1 405 aa5.82□□□□□ -1.48
SNRNP27-204ENST00000487029 SIGLEC6O43699 453 aa5.82□□□□□ -1.48
SNRNP27-204ENST00000487029 SORBS3O60504 671 aa5.82□□□□□ -1.48
SNRNP27-204ENST00000487029 RECKO95980 971 aa5.82□□□□□ -1.48
SNRNP27-204ENST00000487029 MSL3P1P0C860 447 aa5.82□□□□□ -1.48
SNRNP27-204ENST00000487029 TNFRSF1AP19438 455 aa5.82□□□□□ -1.48
SNRNP27-204ENST00000487029 POLR2BP30876 1174 aaKnown RBP5.82□□□□□ -1.48
SNRNP27-204ENST00000487029 CAP1Q01518 475 aa5.82□□□□□ -1.48
SNRNP27-204ENST00000487029 ARSHQ5FYA8 562 aa5.82□□□□□ -1.48
SNRNP27-204ENST00000487029 NUP43Q8NFH3 380 aa5.82□□□□□ -1.48
SNRNP27-204ENST00000487029 FAM161BQ96MY7 647 aa5.82□□□□□ -1.48
SNRNP27-204ENST00000487029 JMJD8Q96S16 334 aa5.82□□□□□ -1.48
SNRNP27-204ENST00000487029 SPATA25Q9BR10 227 aa5.82□□□□□ -1.48
SNRNP27-204ENST00000487029 DUSP10Q9Y6W6 482 aa5.82□□□□□ -1.48
SNRNP27-204ENST00000487029 MEIS1O00470 390 aa5.81□□□□□ -1.48
SNRNP27-204ENST00000487029 FBLN1P23142 703 aa5.81□□□□□ -1.48
SNRNP27-204ENST00000487029 CTSKP43235 329 aa5.81□□□□□ -1.48
SNRNP27-204ENST00000487029 ST13P50502 369 aaKnown RBP5.81□□□□□ -1.48
SNRNP27-204ENST00000487029 RNF4P78317 190 aa5.81□□□□□ -1.48
SNRNP27-204ENST00000487029 FAM160A1Q05DH4 1040 aa5.81□□□□□ -1.48
SNRNP27-204ENST00000487029 UBXN11Q5T124 520 aa5.81□□□□□ -1.48
SNRNP27-204ENST00000487029 NT5DC1Q5TFE4 455 aa5.81□□□□□ -1.48
SNRNP27-204ENST00000487029 LIPIQ6XZB0 460 aa5.81□□□□□ -1.48
SNRNP27-204ENST00000487029 FNIP1Q8TF40 1166 aa5.81□□□□□ -1.48
SNRNP27-204ENST00000487029 ZNF512BQ96KM6 892 aaPredicted RBP5.81□□□□□ -1.48
SNRNP27-204ENST00000487029 IGSF5Q9NSI5 407 aa5.81□□□□□ -1.48
SNRNP27-204ENST00000487029 IMPACTQ9P2X3 320 aa5.81□□□□□ -1.48
SNRNP27-204ENST00000487029 USP31Q70CQ4 1352 aa5.8□□□□□ -1.48
SNRNP27-204ENST00000487029 ATF2P15336 505 aa5.8□□□□□ -1.48
SNRNP27-204ENST00000487029 MAGEA10P43363 369 aaPredicted RBP5.8□□□□□ -1.48
SNRNP27-204ENST00000487029 CHMP4BP1P59074 171 aa5.8□□□□□ -1.48
SNRNP27-204ENST00000487029 ZXDAP98168 799 aa5.8□□□□□ -1.48
SNRNP27-204ENST00000487029 MVKQ03426 396 aa5.8□□□□□ -1.48
SNRNP27-204ENST00000487029 TMEM62Q0P6H9 643 aa5.8□□□□□ -1.48
SNRNP27-204ENST00000487029 REC114Q7Z4M0 266 aa5.8□□□□□ -1.48
SNRNP27-204ENST00000487029 ZNF526Q8TF50 670 aaPredicted RBP5.8□□□□□ -1.48
SNRNP27-204ENST00000487029 VTI1BQ9UEU0 232 aa5.8□□□□□ -1.48
SNRNP27-204ENST00000487029 SUSD2Q9UGT4 822 aa5.8□□□□□ -1.48
SNRNP27-204ENST00000487029 A0A1W2PQ45 241 aaPredicted RBP5.79□□□□□ -1.48
SNRNP27-204ENST00000487029 A0A1W2PQY0 241 aa5.79□□□□□ -1.48
SNRNP27-204ENST00000487029 MATN3O15232 486 aa5.79□□□□□ -1.48
SNRNP27-204ENST00000487029 SUV39H1O43463 412 aa5.79□□□□□ -1.48
SNRNP27-204ENST00000487029 ZNF205O95201 554 aa5.79□□□□□ -1.48
SNRNP27-204ENST00000487029 TCF3P15923 654 aa5.79□□□□□ -1.48
SNRNP27-204ENST00000487029 GARTP22102 1010 aa5.79□□□□□ -1.48
SNRNP27-204ENST00000487029 MAPKAPK2P49137 400 aa5.79□□□□□ -1.48
SNRNP27-204ENST00000487029 DLX2Q07687 328 aaPredicted RBP5.79□□□□□ -1.48
SNRNP27-204ENST00000487029 ZC3H14Q6PJT7 736 aaKnown RBP5.79□□□□□ -1.48
SNRNP27-204ENST00000487029 CRELD1Q96HD1 420 aa5.79□□□□□ -1.48
SNRNP27-204ENST00000487029 CDADC1Q9BWV3 514 aa5.79□□□□□ -1.48
SNRNP27-204ENST00000487029 BACH2Q9BYV9 841 aa5.79□□□□□ -1.48
SNRNP27-204ENST00000487029 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.79□□□□□ -1.48
SNRNP27-204ENST00000487029 CHST7Q9NS84 486 aa5.79□□□□□ -1.48
SNRNP27-204ENST00000487029 AP5S1Q9NUS5 200 aa5.79□□□□□ -1.48
SNRNP27-204ENST00000487029 CNOT11Q9UKZ1 510 aaKnown RBP5.79□□□□□ -1.48
SNRNP27-204ENST00000487029 RAG1P15918 1043 aa5.78□□□□□ -1.48
SNRNP27-204ENST00000487029 ADAM17P78536 824 aa5.78□□□□□ -1.48
SNRNP27-204ENST00000487029 FOXO4P98177 505 aa5.78□□□□□ -1.48
SNRNP27-204ENST00000487029 ZNF827Q17R98 1081 aa5.78□□□□□ -1.48
SNRNP27-204ENST00000487029 GOLM1Q8NBJ4 401 aa5.78□□□□□ -1.48
SNRNP27-204ENST00000487029 DDX1Q92499 740 aaKnown RBP5.78□□□□□ -1.48
SNRNP27-204ENST00000487029 TMEM74Q96NL1 305 aa5.78□□□□□ -1.48
SNRNP27-204ENST00000487029 USP40Q9NVE5 1235 aa5.78□□□□□ -1.48
SNRNP27-204ENST00000487029 SCAMP3O14828 347 aaKnown RBP5.77□□□□□ -1.49
SNRNP27-204ENST00000487029 TLR3O15455 904 aaKnown RBP5.77□□□□□ -1.49
SNRNP27-204ENST00000487029 VAV1P15498 845 aa5.77□□□□□ -1.49
SNRNP27-204ENST00000487029 PFKLP17858 780 aa5.77□□□□□ -1.49
SNRNP27-204ENST00000487029 GBP2P32456 591 aaPredicted RBP5.77□□□□□ -1.49
SNRNP27-204ENST00000487029 HTRA3P83110 453 aa5.77□□□□□ -1.49
SNRNP27-204ENST00000487029 MPP2Q14168 576 aa5.77□□□□□ -1.49
SNRNP27-204ENST00000487029 LDLRAD1Q5T700 205 aa5.77□□□□□ -1.49
SNRNP27-204ENST00000487029 DIEXFQ68CQ4 756 aaKnown RBP5.77□□□□□ -1.49
SNRNP27-204ENST00000487029 SAPCD2Q86UD0 394 aa5.77□□□□□ -1.49
SNRNP27-204ENST00000487029 NLGN1Q8N2Q7 840 aa5.77□□□□□ -1.49
SNRNP27-204ENST00000487029 RBM15Q96T37 977 aaKnown RBP eCLIP5.77□□□□□ -1.49
SNRNP27-204ENST00000487029 KRTAP3-1Q9BYR8 98 aa5.77□□□□□ -1.49
SNRNP27-204ENST00000487029 GFOD1Q9NXC2 390 aa5.77□□□□□ -1.49
SNRNP27-204ENST00000487029 PALD1Q9ULE6 856 aa5.77□□□□□ -1.49
SNRNP27-204ENST00000487029 MINDY4BA8MYZ0 360 aa5.76□□□□□ -1.49
SNRNP27-204ENST00000487029 NOBOXO60393 691 aa5.76□□□□□ -1.49
SNRNP27-204ENST00000487029 BMP8BP34820 402 aa5.76□□□□□ -1.49
SNRNP27-204ENST00000487029 CNR2P34972 360 aa5.76□□□□□ -1.49
SNRNP27-204ENST00000487029 MC3RP41968 323 aa5.76□□□□□ -1.49
SNRNP27-204ENST00000487029 NR1I3Q14994 352 aa5.76□□□□□ -1.49
SNRNP27-204ENST00000487029 RTP2Q5QGT7 225 aa5.76□□□□□ -1.49
SNRNP27-204ENST00000487029 SNAP47Q5SQN1 464 aa5.76□□□□□ -1.49
SNRNP27-204ENST00000487029 OVOS1Q6IE37 1185 aa5.76□□□□□ -1.49
SNRNP27-204ENST00000487029 CRTC3Q6UUV7 619 aa5.76□□□□□ -1.49
SNRNP27-204ENST00000487029 TMEM87AQ8NBN3 555 aa5.76□□□□□ -1.49
SNRNP27-204ENST00000487029 BRMS1Q9HCU9 246 aa5.76□□□□□ -1.49
SNRNP27-204ENST00000487029 PCDHB14Q9Y5E9 798 aa5.76□□□□□ -1.49
SNRNP27-204ENST00000487029 SH3D21A4FU49 640 aa5.75□□□□□ -1.49
SNRNP27-204ENST00000487029 ITGB3P05106 788 aa5.75□□□□□ -1.49
SNRNP27-204ENST00000487029 DBHP09172 617 aa5.75□□□□□ -1.49
SNRNP27-204ENST00000487029 CDCP2Q5VXM1 449 aa5.75□□□□□ -1.49
SNRNP27-204ENST00000487029 TMEM192Q8IY95 271 aa5.75□□□□□ -1.49
SNRNP27-204ENST00000487029 SLC16A11Q8NCK7 471 aa5.75□□□□□ -1.49
SNRNP27-204ENST00000487029 RSRP1Q9BUV0 290 aa5.75□□□□□ -1.49
SNRNP27-204ENST00000487029 METTL5Q9NRN9 209 aaKnown RBP5.75□□□□□ -1.49
SNRNP27-204ENST00000487029 GMIPQ9P107 970 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms