RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 PIN1Q13526 163 aaPredicted RBP6.43□□□□□ -1.38
SF1-217ENST00000486960 DNAJC21Q5F1R6 531 aaKnown RBP6.43□□□□□ -1.38
SF1-217ENST00000486960 TAF3Q5VWG9 929 aa6.43□□□□□ -1.38
SF1-217ENST00000486960 DUSP27Q5VZP5 1158 aa6.43□□□□□ -1.38
SF1-217ENST00000486960 ALKBH2Q6NS38 261 aa6.43□□□□□ -1.38
SF1-217ENST00000486960 MZT2BQ6NZ67 158 aa6.43□□□□□ -1.38
SF1-217ENST00000486960 CPLX2Q6PUV4 134 aaKnown RBP6.43□□□□□ -1.38
SF1-217ENST00000486960 USP50Q70EL3 339 aaPredicted RBP6.43□□□□□ -1.38
SF1-217ENST00000486960 ALKBH8Q96BT7 664 aaKnown RBP6.43□□□□□ -1.38
SF1-217ENST00000486960 TBC1D20Q96BZ9 403 aa6.43□□□□□ -1.38
SF1-217ENST00000486960 ELAC2Q9BQ52 826 aaKnown RBP6.43□□□□□ -1.38
SF1-217ENST00000486960 XPO4Q9C0E2 1151 aaKnown RBP6.43□□□□□ -1.38
SF1-217ENST00000486960 C11orf16Q9NQ32 467 aa6.43□□□□□ -1.38
SF1-217ENST00000486960 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.43□□□□□ -1.38
SF1-217ENST00000486960 LEMD3Q9Y2U8 911 aa6.43□□□□□ -1.38
SF1-217ENST00000486960 TTC21AQ8NDW8 1320 aa6.43□□□□□ -1.38
SF1-217ENST00000486960 TONSLQ96HA7 1378 aa6.43□□□□□ -1.38
SF1-217ENST00000486960 SNED1Q8TER0 1413 aa6.42□□□□□ -1.38
SF1-217ENST00000486960 LAMB1P07942 1786 aa6.42□□□□□ -1.38
SF1-217ENST00000486960 PNMA6FA0A0J9YX94 578 aa6.42□□□□□ -1.38
SF1-217ENST00000486960 KLRG2A4D1S0 409 aaPredicted RBP6.42□□□□□ -1.38
SF1-217ENST00000486960 ZBBXA8MT70 800 aa6.42□□□□□ -1.38
SF1-217ENST00000486960 BAIAP3O94812 1187 aa6.42□□□□□ -1.38
SF1-217ENST00000486960 RHOBTB3O94955 611 aa6.42□□□□□ -1.38
SF1-217ENST00000486960 FBXO45P0C2W1 286 aa6.42□□□□□ -1.38
SF1-217ENST00000486960 IDEP14735 1019 aa6.42□□□□□ -1.38
SF1-217ENST00000486960 SNX16P57768 344 aa6.42□□□□□ -1.38
SF1-217ENST00000486960 APOBRQ0VD83 1088 aa6.42□□□□□ -1.38
SF1-217ENST00000486960 KCNH2Q12809 1159 aa6.42□□□□□ -1.38
SF1-217ENST00000486960 COL9A2Q14055 689 aaPredicted RBP6.42□□□□□ -1.38
SF1-217ENST00000486960 NFIXQ14938 502 aa6.42□□□□□ -1.38
SF1-217ENST00000486960 LMBRD2Q68DH5 695 aaPredicted RBP6.42□□□□□ -1.38
SF1-217ENST00000486960 C16orf54Q6UWD8 224 aa6.42□□□□□ -1.38
SF1-217ENST00000486960 TMEM92Q6UXU6 159 aa6.42□□□□□ -1.38
SF1-217ENST00000486960 RSRC2Q7L4I2 434 aaKnown RBP6.42□□□□□ -1.38
SF1-217ENST00000486960 TTC30AQ86WT1 665 aa6.42□□□□□ -1.38
SF1-217ENST00000486960 MAGEB6Q8N7X4 407 aa6.42□□□□□ -1.38
SF1-217ENST00000486960 NKAIN3Q8N8D7 197 aa6.42□□□□□ -1.38
SF1-217ENST00000486960 PLPP7Q8NBV4 271 aa6.42□□□□□ -1.38
SF1-217ENST00000486960 KCNH5Q8NCM2 988 aa6.42□□□□□ -1.38
SF1-217ENST00000486960 PJA1Q8NG27 643 aa6.42□□□□□ -1.38
SF1-217ENST00000486960 FBF1Q8TES7 1133 aa6.42□□□□□ -1.38
SF1-217ENST00000486960 ATXN2LQ8WWM7 1075 aaKnown RBP6.42□□□□□ -1.38
SF1-217ENST00000486960 JPH3Q8WXH2 748 aaPredicted RBP6.42□□□□□ -1.38
SF1-217ENST00000486960 CENPTQ96BT3 561 aa6.42□□□□□ -1.38
SF1-217ENST00000486960 STRBPQ96SI9 672 aaKnown RBP6.42□□□□□ -1.38
SF1-217ENST00000486960 MAP3K14Q99558 947 aa6.42□□□□□ -1.38
SF1-217ENST00000486960 CNNM2Q9H8M5 875 aa6.42□□□□□ -1.38
SF1-217ENST00000486960 PLCB1Q9NQ66 1216 aa6.42□□□□□ -1.38
SF1-217ENST00000486960 AASDHPPTQ9NRN7 309 aa6.42□□□□□ -1.38
SF1-217ENST00000486960 MKL2Q9ULH7 1088 aa6.42□□□□□ -1.38
SF1-217ENST00000486960 MORC2Q9Y6X9 1032 aaPredicted RBP6.42□□□□□ -1.38
SF1-217ENST00000486960 V9GY48 417 aaPredicted RBP6.42□□□□□ -1.38
SF1-217ENST00000486960 MAP1BP46821 2468 aaKnown RBP6.42□□□□□ -1.38
SF1-217ENST00000486960 NAV2Q8IVL1 2488 aa6.42□□□□□ -1.38
SF1-217ENST00000486960 ASH1LQ9NR48 2969 aaKnown RBP6.42□□□□□ -1.38
SF1-217ENST00000486960 CHD9Q3L8U1 2897 aa6.41□□□□□ -1.38
SF1-217ENST00000486960 ZNF318Q5VUA4 2279 aa6.41□□□□□ -1.38
SF1-217ENST00000486960 A6NCN8 305 aa6.41□□□□□ -1.38
SF1-217ENST00000486960 SMTNL1A8MU46 457 aa6.41□□□□□ -1.38
SF1-217ENST00000486960 C9IYK1 514 aa6.41□□□□□ -1.38
SF1-217ENST00000486960 H0YIN7 160 aa6.41□□□□□ -1.38
SF1-217ENST00000486960 CYP27B1O15528 508 aa6.41□□□□□ -1.38
SF1-217ENST00000486960 NBNO60934 754 aa6.41□□□□□ -1.38
SF1-217ENST00000486960 ASMTLO95671 621 aa6.41□□□□□ -1.38
SF1-217ENST00000486960 FDX1P10109 184 aa6.41□□□□□ -1.38
SF1-217ENST00000486960 MYCLP1P12525 358 aaPredicted RBP6.41□□□□□ -1.38
SF1-217ENST00000486960 TYRP1P17643 537 aa6.41□□□□□ -1.38
SF1-217ENST00000486960 NAT1P18440 290 aa6.41□□□□□ -1.38
SF1-217ENST00000486960 RPL17P18621 184 aaKnown RBP6.41□□□□□ -1.38
SF1-217ENST00000486960 KIF5BP33176 963 aa6.41□□□□□ -1.38
SF1-217ENST00000486960 CCT5P48643 541 aa6.41□□□□□ -1.38
SF1-217ENST00000486960 NAP1L1P55209 391 aaKnown RBP6.41□□□□□ -1.38
SF1-217ENST00000486960 IFT88Q13099 833 aa6.41□□□□□ -1.38
SF1-217ENST00000486960 CHAF1AQ13111 956 aaPredicted RBP6.41□□□□□ -1.38
SF1-217ENST00000486960 TBX2Q13207 712 aaPredicted RBP6.41□□□□□ -1.38
SF1-217ENST00000486960 MTMR2Q13614 643 aa6.41□□□□□ -1.38
SF1-217ENST00000486960 SMC1AQ14683 1233 aaKnown RBP6.41□□□□□ -1.38
SF1-217ENST00000486960 E2F5Q15329 346 aa6.41□□□□□ -1.38
SF1-217ENST00000486960 C2orf27AQ580R0 203 aa6.41□□□□□ -1.38
SF1-217ENST00000486960 PADI6Q6TGC4 694 aa6.41□□□□□ -1.38
SF1-217ENST00000486960 THNSL2Q86YJ6 484 aa6.41□□□□□ -1.38
SF1-217ENST00000486960 PASD1Q8IV76 773 aa6.41□□□□□ -1.38
SF1-217ENST00000486960 TRIM22Q8IYM9 498 aa6.41□□□□□ -1.38
SF1-217ENST00000486960 ACRBPQ8NEB7 543 aa6.41□□□□□ -1.38
SF1-217ENST00000486960 C7orf43Q8WVR3 580 aa6.41□□□□□ -1.38
SF1-217ENST00000486960 ZNF830Q96NB3 372 aaPredicted RBP6.41□□□□□ -1.38
SF1-217ENST00000486960 NECAB3Q96P71 396 aaPredicted RBP6.41□□□□□ -1.38
SF1-217ENST00000486960 CDX2Q99626 313 aaPredicted RBP6.41□□□□□ -1.38
SF1-217ENST00000486960 HINFPQ9BQA5 517 aa6.41□□□□□ -1.38
SF1-217ENST00000486960 SARGQ9BW04 601 aa6.41□□□□□ -1.38
SF1-217ENST00000486960 AP1M1Q9BXS5 423 aa6.41□□□□□ -1.38
SF1-217ENST00000486960 C22orf23Q9BZE7 217 aa6.41□□□□□ -1.38
SF1-217ENST00000486960 ASPSCR1Q9BZE9 553 aa6.41□□□□□ -1.38
SF1-217ENST00000486960 SUDS3Q9H7L9 328 aaPredicted RBP6.41□□□□□ -1.38
SF1-217ENST00000486960 MSRB2Q9Y3D2 182 aa6.41□□□□□ -1.38
SF1-217ENST00000486960 TTLL3Q9Y4R7 772 aa6.41□□□□□ -1.38
SF1-217ENST00000486960 CNTNAP4Q9C0A0 1308 aa6.41□□□□□ -1.38
SF1-217ENST00000486960 USP24Q9UPU5 2620 aa6.41□□□□□ -1.38
SF1-217ENST00000486960 VPS13AQ96RL7 3174 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms