RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 RAPGEFL1Q9UHV5 662 aa6.49□□□□□ -1.37
SNRNP40-205ENST00000486941 MBD1Q9UIS9 605 aaPredicted RBP6.49□□□□□ -1.37
SNRNP40-205ENST00000486941 ZMYM4Q5VZL5 1548 aa6.49□□□□□ -1.37
SNRNP40-205ENST00000486941 POGZQ7Z3K3 1410 aa6.49□□□□□ -1.37
SNRNP40-205ENST00000486941 RIMS1Q86UR5 1692 aaKnown RBP6.49□□□□□ -1.37
SNRNP40-205ENST00000486941 PCF11O94913 1555 aaKnown RBP6.48□□□□□ -1.37
SNRNP40-205ENST00000486941 LMTK3Q96Q04 1460 aa6.48□□□□□ -1.37
SNRNP40-205ENST00000486941 PDE6BP35913 854 aa6.48□□□□□ -1.37
SNRNP40-205ENST00000486941 EIF4A3P38919 411 aaKnown RBP6.48□□□□□ -1.37
SNRNP40-205ENST00000486941 CHRNEQ04844 493 aa6.48□□□□□ -1.37
SNRNP40-205ENST00000486941 CLEC16AQ2KHT3 1053 aa6.48□□□□□ -1.37
SNRNP40-205ENST00000486941 LDLRAD1Q5T700 205 aa6.48□□□□□ -1.37
SNRNP40-205ENST00000486941 CDCP2Q5VXM1 449 aa6.48□□□□□ -1.37
SNRNP40-205ENST00000486941 RNF111Q6ZNA4 994 aa6.48□□□□□ -1.37
SNRNP40-205ENST00000486941 TMEM192Q8IY95 271 aa6.48□□□□□ -1.37
SNRNP40-205ENST00000486941 ENOX1Q8TC92 643 aaKnown RBP6.48□□□□□ -1.37
SNRNP40-205ENST00000486941 ATG4CQ96DT6 458 aa6.48□□□□□ -1.37
SNRNP40-205ENST00000486941 MAP6Q96JE9 813 aa6.48□□□□□ -1.37
SNRNP40-205ENST00000486941 PRDM14Q9GZV8 571 aa6.48□□□□□ -1.37
SNRNP40-205ENST00000486941 EHMT1Q9H9B1 1298 aa6.48□□□□□ -1.37
SNRNP40-205ENST00000486941 PLCH2O75038 1416 aa6.48□□□□□ -1.37
SNRNP40-205ENST00000486941 TTC37Q6PGP7 1564 aa6.48□□□□□ -1.37
SNRNP40-205ENST00000486941 ZFYVE16Q7Z3T8 1539 aa6.47□□□□□ -1.37
SNRNP40-205ENST00000486941 NRDCO43847 1150 aa6.47□□□□□ -1.37
SNRNP40-205ENST00000486941 SEMA7AO75326 666 aa6.47□□□□□ -1.37
SNRNP40-205ENST00000486941 PRAMEF1O95521 474 aa6.47□□□□□ -1.37
SNRNP40-205ENST00000486941 EPHB3P54753 998 aa6.47□□□□□ -1.37
SNRNP40-205ENST00000486941 DUSP4Q13115 394 aa6.47□□□□□ -1.37
SNRNP40-205ENST00000486941 WAPLQ7Z5K2 1190 aa6.47□□□□□ -1.37
SNRNP40-205ENST00000486941 LINC00116Q8NCU8 138 aa6.47□□□□□ -1.37
SNRNP40-205ENST00000486941 ZNF296Q8WUU4 475 aaPredicted RBP6.47□□□□□ -1.37
SNRNP40-205ENST00000486941 CNNM2Q9H8M5 875 aa6.47□□□□□ -1.37
SNRNP40-205ENST00000486941 UBP1Q9NZI7 540 aa6.47□□□□□ -1.37
SNRNP40-205ENST00000486941 GMIPQ9P107 970 aa6.47□□□□□ -1.37
SNRNP40-205ENST00000486941 TCFL5Q9UL49 500 aa6.47□□□□□ -1.37
SNRNP40-205ENST00000486941 CDK11AQ9UQ88 783 aaPredicted RBP6.47□□□□□ -1.37
SNRNP40-205ENST00000486941 SETD1BQ9UPS6 1966 aaKnown RBP6.47□□□□□ -1.37
SNRNP40-205ENST00000486941 HECW1Q76N89 1606 aa6.47□□□□□ -1.37
SNRNP40-205ENST00000486941 CDK13Q14004 1512 aaKnown RBP6.46□□□□□ -1.37
SNRNP40-205ENST00000486941 A0A0G2JLL6 359 aaPredicted RBP6.46□□□□□ -1.38
SNRNP40-205ENST00000486941 B8ZZF3 427 aa6.46□□□□□ -1.38
SNRNP40-205ENST00000486941 FKTNO75072 461 aa6.46□□□□□ -1.38
SNRNP40-205ENST00000486941 CTSKP43235 329 aa6.46□□□□□ -1.38
SNRNP40-205ENST00000486941 PWP1Q13610 501 aa6.46□□□□□ -1.38
SNRNP40-205ENST00000486941 ADGRF1Q5T601 910 aa6.46□□□□□ -1.38
SNRNP40-205ENST00000486941 EFCAB2Q5VUJ9 269 aa6.46□□□□□ -1.38
SNRNP40-205ENST00000486941 FMN1Q68DA7 1419 aa6.46□□□□□ -1.38
SNRNP40-205ENST00000486941 ZNF655Q8N720 491 aaPredicted RBP6.46□□□□□ -1.38
SNRNP40-205ENST00000486941 KCNC2Q96PR1 638 aa6.46□□□□□ -1.38
SNRNP40-205ENST00000486941 SCAPERQ9BY12 1400 aa6.46□□□□□ -1.38
SNRNP40-205ENST00000486941 CNTD2Q9H8S5 307 aa6.46□□□□□ -1.38
SNRNP40-205ENST00000486941 YEATS2Q9ULM3 1422 aa6.46□□□□□ -1.38
SNRNP40-205ENST00000486941 KCTD3Q9Y597 815 aa6.46□□□□□ -1.38
SNRNP40-205ENST00000486941 ADAMTS20P59510 1910 aa6.46□□□□□ -1.38
SNRNP40-205ENST00000486941 SIGLEC1Q9BZZ2 1709 aa6.45□□□□□ -1.38
SNRNP40-205ENST00000486941 MYO5CQ9NQX4 1742 aa6.45□□□□□ -1.38
SNRNP40-205ENST00000486941 FER1L4A9Z1Z3 1794 aa6.45□□□□□ -1.38
SNRNP40-205ENST00000486941 TRIM13O60858 407 aa6.45□□□□□ -1.38
SNRNP40-205ENST00000486941 SYPP08247 313 aa6.45□□□□□ -1.38
SNRNP40-205ENST00000486941 RAG1P15918 1043 aa6.45□□□□□ -1.38
SNRNP40-205ENST00000486941 BMP7P18075 431 aa6.45□□□□□ -1.38
SNRNP40-205ENST00000486941 VIPR1P32241 457 aa6.45□□□□□ -1.38
SNRNP40-205ENST00000486941 CWF19L2Q2TBE0 894 aaKnown RBP6.45□□□□□ -1.38
SNRNP40-205ENST00000486941 TMEM52Q8NDY8 209 aa6.45□□□□□ -1.38
SNRNP40-205ENST00000486941 PARD6AQ9NPB6 346 aa6.45□□□□□ -1.38
SNRNP40-205ENST00000486941 ZMYM5Q9UJ78 669 aa6.45□□□□□ -1.38
SNRNP40-205ENST00000486941 CNOT6Q9ULM6 557 aaKnown RBP6.45□□□□□ -1.38
SNRNP40-205ENST00000486941 ATP10AO60312 1499 aa6.45□□□□□ -1.38
SNRNP40-205ENST00000486941 ROBO2Q9HCK4 1378 aa6.44□□□□□ -1.38
SNRNP40-205ENST00000486941 OR14I1A6ND48 311 aa6.44□□□□□ -1.38
SNRNP40-205ENST00000486941 FADS2P1A8MWK0 482 aa6.44□□□□□ -1.38
SNRNP40-205ENST00000486941 KIR2DL1P43626 348 aaPredicted RBP6.44□□□□□ -1.38
SNRNP40-205ENST00000486941 KIR2DL2P43627 348 aaPredicted RBP6.44□□□□□ -1.38
SNRNP40-205ENST00000486941 HSPA2P54652 639 aa6.44□□□□□ -1.38
SNRNP40-205ENST00000486941 CTSWP56202 376 aa6.44□□□□□ -1.38
SNRNP40-205ENST00000486941 YBX1P67809 324 aaKnown RBP6.44□□□□□ -1.38
SNRNP40-205ENST00000486941 MLECQ14165 292 aa6.44□□□□□ -1.38
SNRNP40-205ENST00000486941 MRPL58Q14197 206 aaKnown RBP6.44□□□□□ -1.38
SNRNP40-205ENST00000486941 CEP128Q6ZU80 1094 aa6.44□□□□□ -1.38
SNRNP40-205ENST00000486941 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.44□□□□□ -1.38
SNRNP40-205ENST00000486941 MRS2Q9HD23 443 aa6.44□□□□□ -1.38
SNRNP40-205ENST00000486941 SUPT16HQ9Y5B9 1047 aaKnown RBP6.44□□□□□ -1.38
SNRNP40-205ENST00000486941 ARHGAP35Q9NRY4 1499 aa6.43□□□□□ -1.38
SNRNP40-205ENST00000486941 SIGLEC6O43699 453 aa6.43□□□□□ -1.38
SNRNP40-205ENST00000486941 PI3P19957 117 aa6.43□□□□□ -1.38
SNRNP40-205ENST00000486941 SRSF3P84103 164 aaKnown RBP6.43□□□□□ -1.38
SNRNP40-205ENST00000486941 SEZ6Q53EL9 994 aa6.43□□□□□ -1.38
SNRNP40-205ENST00000486941 TMEM132EQ6IEE7 984 aa6.43□□□□□ -1.38
SNRNP40-205ENST00000486941 GK5Q6ZS86 529 aa6.43□□□□□ -1.38
SNRNP40-205ENST00000486941 TMEFF1Q8IYR6 380 aa6.43□□□□□ -1.38
SNRNP40-205ENST00000486941 MARCH10Q8NA82 808 aaPredicted RBP6.43□□□□□ -1.38
SNRNP40-205ENST00000486941 DACT3Q96B18 629 aaPredicted RBP6.43□□□□□ -1.38
SNRNP40-205ENST00000486941 CRTAC1Q9NQ79 661 aa6.43□□□□□ -1.38
SNRNP40-205ENST00000486941 ARHGEF12Q9NZN5 1544 aa6.43□□□□□ -1.38
SNRNP40-205ENST00000486941 TROQ12816 1431 aaPredicted RBP6.42□□□□□ -1.38
SNRNP40-205ENST00000486941 C9orf84Q5VXU9 1444 aa6.42□□□□□ -1.38
SNRNP40-205ENST00000486941 ZNF518AQ6AHZ1 1483 aa6.42□□□□□ -1.38
SNRNP40-205ENST00000486941 CDR1P51861 262 aa6.42□□□□□ -1.38
SNRNP40-205ENST00000486941 PCBP3P57721 371 aaKnown RBP6.42□□□□□ -1.38
SNRNP40-205ENST00000486941 RNF4P78317 190 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms