RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 ZNF397Q8NF99 534 aaPredicted RBP20.3■□□□□ 0.84
PDLIM7-207ENST00000486828 NAA15Q9BXJ9 866 aaKnown RBP20.3■□□□□ 0.84
PDLIM7-207ENST00000486828 ITIH6Q6UXX5 1313 aa20.3■□□□□ 0.84
PDLIM7-207ENST00000486828 FOCADQ5VW36 1801 aa20.3■□□□□ 0.84
PDLIM7-207ENST00000486828 KLRG2A4D1S0 409 aaPredicted RBP20.29■□□□□ 0.84
PDLIM7-207ENST00000486828 LRRC10BA6NIK2 292 aa20.29■□□□□ 0.84
PDLIM7-207ENST00000486828 DDR1Q08345 913 aa20.29■□□□□ 0.84
PDLIM7-207ENST00000486828 RBL2Q08999 1139 aa20.29■□□□□ 0.84
PDLIM7-207ENST00000486828 NELFBQ8WX92 580 aa20.29■□□□□ 0.84
PDLIM7-207ENST00000486828 RRP36Q96EU6 259 aaKnown RBP20.29■□□□□ 0.84
PDLIM7-207ENST00000486828 CEP95Q96GE4 821 aa20.29■□□□□ 0.84
PDLIM7-207ENST00000486828 C6orf229H3BNL8 230 aa20.29■□□□□ 0.84
PDLIM7-207ENST00000486828 POLRMTO00411 1230 aaKnown RBP20.29■□□□□ 0.84
PDLIM7-207ENST00000486828 FANCGO15287 622 aa20.29■□□□□ 0.84
PDLIM7-207ENST00000486828 MYL1P05976 194 aa20.29■□□□□ 0.84
PDLIM7-207ENST00000486828 UBA7P41226 1012 aa20.29■□□□□ 0.84
PDLIM7-207ENST00000486828 KRT31Q15323 416 aa20.29■□□□□ 0.84
PDLIM7-207ENST00000486828 USP17L2Q6R6M4 530 aa20.29■□□□□ 0.84
PDLIM7-207ENST00000486828 TMC4Q7Z404 712 aa20.29■□□□□ 0.84
PDLIM7-207ENST00000486828 CPVLQ9H3G5 476 aa20.29■□□□□ 0.84
PDLIM7-207ENST00000486828 C6orf50Q9HD87 102 aa20.29■□□□□ 0.84
PDLIM7-207ENST00000486828 PP2D1A8MPX8 630 aa20.28■□□□□ 0.84
PDLIM7-207ENST00000486828 MFAP3LO75121 409 aa20.28■□□□□ 0.84
PDLIM7-207ENST00000486828 GNA11P29992 359 aa20.28■□□□□ 0.84
PDLIM7-207ENST00000486828 KCNB1Q14721 858 aa20.28■□□□□ 0.84
PDLIM7-207ENST00000486828 NONOQ15233 471 aaKnown RBP eCLIP20.28■□□□□ 0.84
PDLIM7-207ENST00000486828 RASSF8Q8NHQ8 419 aa20.28■□□□□ 0.84
PDLIM7-207ENST00000486828 SRRTQ9BXP5 876 aaKnown RBP20.28■□□□□ 0.84
PDLIM7-207ENST00000486828 SEC63Q9UGP8 760 aaKnown RBP20.28■□□□□ 0.84
PDLIM7-207ENST00000486828 GDAQ9Y2T3 454 aa20.28■□□□□ 0.84
PDLIM7-207ENST00000486828 PLIN4Q96Q06 1357 aa20.28■□□□□ 0.84
PDLIM7-207ENST00000486828 SMCO2A6NFE2 343 aa20.27■□□□□ 0.84
PDLIM7-207ENST00000486828 COBLO75128 1261 aa20.27■□□□□ 0.84
PDLIM7-207ENST00000486828 PRCPP42785 496 aa20.27■□□□□ 0.84
PDLIM7-207ENST00000486828 SEMA3FQ13275 785 aa20.27■□□□□ 0.84
PDLIM7-207ENST00000486828 AK8Q96MA6 479 aa20.27■□□□□ 0.84
PDLIM7-207ENST00000486828 DAGLAQ9Y4D2 1042 aa20.27■□□□□ 0.84
PDLIM7-207ENST00000486828 CBX1P83916 185 aa20.27■□□□□ 0.84
PDLIM7-207ENST00000486828 KMT5BQ4FZB7 885 aa20.27■□□□□ 0.84
PDLIM7-207ENST00000486828 CNGA4Q8IV77 575 aa20.27■□□□□ 0.84
PDLIM7-207ENST00000486828 SP8Q8IXZ3 490 aa20.27■□□□□ 0.84
PDLIM7-207ENST00000486828 ADSSL1Q8N142 457 aa20.27■□□□□ 0.84
PDLIM7-207ENST00000486828 ANKRD20A12PQ8NF67 263 aa20.27■□□□□ 0.84
PDLIM7-207ENST00000486828 CCDC51Q96ER9 411 aa20.27■□□□□ 0.84
PDLIM7-207ENST00000486828 KBTBD4Q9NVX7 518 aa20.27■□□□□ 0.84
PDLIM7-207ENST00000486828 PARP3Q9Y6F1 533 aa20.27■□□□□ 0.84
PDLIM7-207ENST00000486828 PPEF1O14829 653 aaPredicted RBP20.26■□□□□ 0.83
PDLIM7-207ENST00000486828 OR52Z1P0C646 297 aa20.26■□□□□ 0.83
PDLIM7-207ENST00000486828 CCT6AP40227 531 aaKnown RBP20.26■□□□□ 0.83
PDLIM7-207ENST00000486828 COPB1P53618 953 aaKnown RBP20.26■□□□□ 0.83
PDLIM7-207ENST00000486828 TCP11X2Q5H9J9 407 aa20.26■□□□□ 0.83
PDLIM7-207ENST00000486828 SOGA3Q5TF21 947 aa20.26■□□□□ 0.83
PDLIM7-207ENST00000486828 LRRN4CLQ8ND94 238 aa20.26■□□□□ 0.83
PDLIM7-207ENST00000486828 CUEDC2Q9H467 287 aa20.26■□□□□ 0.83
PDLIM7-207ENST00000486828 MAGEF1Q9HAY2 307 aa20.26■□□□□ 0.83
PDLIM7-207ENST00000486828 ESYT2A0FGR8 921 aa20.25■□□□□ 0.83
PDLIM7-207ENST00000486828 SOWAHDA6NJG2 315 aa20.25■□□□□ 0.83
PDLIM7-207ENST00000486828 KCNJ18B7U540 433 aa20.25■□□□□ 0.83
PDLIM7-207ENST00000486828 N4BP3O15049 544 aa20.25■□□□□ 0.83
PDLIM7-207ENST00000486828 URI1O94763 535 aaPredicted RBP20.25■□□□□ 0.83
PDLIM7-207ENST00000486828 GYPCP04921 128 aa20.25■□□□□ 0.83
PDLIM7-207ENST00000486828 CCDC175P0C221 793 aa20.25■□□□□ 0.83
PDLIM7-207ENST00000486828 GTF2IP78347 998 aa20.25■□□□□ 0.83
PDLIM7-207ENST00000486828 KCNJ12Q14500 433 aa20.25■□□□□ 0.83
PDLIM7-207ENST00000486828 MTF1Q14872 753 aa20.25■□□□□ 0.83
PDLIM7-207ENST00000486828 CPLX3Q8WVH0 158 aa20.25■□□□□ 0.83
PDLIM7-207ENST00000486828 DESI2Q9BSY9 194 aa20.25■□□□□ 0.83
PDLIM7-207ENST00000486828 PDGFDQ9GZP0 370 aaPredicted RBP20.25■□□□□ 0.83
PDLIM7-207ENST00000486828 RIOX1Q9H6W3 641 aa20.25■□□□□ 0.83
PDLIM7-207ENST00000486828 SUGT1Q9Y2Z0 365 aa20.25■□□□□ 0.83
PDLIM7-207ENST00000486828 SPDYE4A6NLX3 237 aa20.25■□□□□ 0.83
PDLIM7-207ENST00000486828 H7C1D1 291 aa20.25■□□□□ 0.83
PDLIM7-207ENST00000486828 hCG_1984214I3L0E3 225 aa20.25■□□□□ 0.83
PDLIM7-207ENST00000486828 KLRC4O43908 158 aa20.25■□□□□ 0.83
PDLIM7-207ENST00000486828 FECHP22830 423 aa20.25■□□□□ 0.83
PDLIM7-207ENST00000486828 CASQ1P31415 396 aa20.25■□□□□ 0.83
PDLIM7-207ENST00000486828 CASP14P31944 242 aa20.25■□□□□ 0.83
PDLIM7-207ENST00000486828 GNG11P61952 73 aa20.25■□□□□ 0.83
PDLIM7-207ENST00000486828 ERCC6LQ2NKX8 1250 aa20.25■□□□□ 0.83
PDLIM7-207ENST00000486828 LETM2Q2VYF4 491 aa20.25■□□□□ 0.83
PDLIM7-207ENST00000486828 FBXO38Q6PIJ6 1188 aa20.25■□□□□ 0.83
PDLIM7-207ENST00000486828 NEK8Q86SG6 692 aa20.25■□□□□ 0.83
PDLIM7-207ENST00000486828 SMAP1Q8IYB5 467 aaPredicted RBP20.25■□□□□ 0.83
PDLIM7-207ENST00000486828 ZNF713Q8N859 430 aaPredicted RBP20.25■□□□□ 0.83
PDLIM7-207ENST00000486828 PIGSQ96S52 555 aa20.25■□□□□ 0.83
PDLIM7-207ENST00000486828 COA1Q9GZY4 146 aa20.25■□□□□ 0.83
PDLIM7-207ENST00000486828 OGFRQ9NZT2 677 aa20.25■□□□□ 0.83
PDLIM7-207ENST00000486828 USP17L5A8MUK1 530 aa20.24■□□□□ 0.83
PDLIM7-207ENST00000486828 CCNT1O60563 726 aaKnown RBP20.24■□□□□ 0.83
PDLIM7-207ENST00000486828 RHOBTB3O94955 611 aa20.24■□□□□ 0.83
PDLIM7-207ENST00000486828 TPM1P09493 284 aa20.24■□□□□ 0.83
PDLIM7-207ENST00000486828 PDHBP11177 359 aa20.24■□□□□ 0.83
PDLIM7-207ENST00000486828 GABPAQ06546 454 aa20.24■□□□□ 0.83
PDLIM7-207ENST00000486828 ORC2Q13416 577 aaPredicted RBP20.24■□□□□ 0.83
PDLIM7-207ENST00000486828 R3HDM1Q15032 1099 aaKnown RBP20.24■□□□□ 0.83
PDLIM7-207ENST00000486828 RAD9BQ6WBX8 426 aa20.24■□□□□ 0.83
PDLIM7-207ENST00000486828 CABP7Q86V35 215 aa20.24■□□□□ 0.83
PDLIM7-207ENST00000486828 TAB2Q9NYJ8 693 aa20.24■□□□□ 0.83
PDLIM7-207ENST00000486828 MAPK8IP1Q9UQF2 711 aa20.24■□□□□ 0.83
PDLIM7-207ENST00000486828 FXR1P51114 621 aaKnown RBP eCLIP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms