RNA–Protein interactions for RNA: ENST00000486461.1

PDZD11-204, Transcript of PDZ domain containing 11, humanhuman

TSL 3

Gene PDZD11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11-204ENST00000486461 SAP30BPQ9UHR5 308 aaKnown RBP7.34□□□□□ -1.23
PDZD11-204ENST00000486461 TET1Q8NFU7 2136 aa7.34□□□□□ -1.23
PDZD11-204ENST00000486461 MYO7AQ13402 2215 aa7.33□□□□□ -1.24
PDZD11-204ENST00000486461 GRIN2DO15399 1336 aa7.33□□□□□ -1.24
PDZD11-204ENST00000486461 PTPRSQ13332 1948 aa7.33□□□□□ -1.24
PDZD11-204ENST00000486461 CTAGE5O15320 804 aa7.33□□□□□ -1.24
PDZD11-204ENST00000486461 ADCY6O43306 1168 aa7.33□□□□□ -1.24
PDZD11-204ENST00000486461 ZEB2O60315 1214 aa7.33□□□□□ -1.24
PDZD11-204ENST00000486461 VAMP4O75379 141 aa7.33□□□□□ -1.24
PDZD11-204ENST00000486461 BAIAP3O94812 1187 aa7.33□□□□□ -1.24
PDZD11-204ENST00000486461 SUPT20HL2P0C7V6 817 aa7.33□□□□□ -1.24
PDZD11-204ENST00000486461 CYP2C9P11712 490 aa7.33□□□□□ -1.24
PDZD11-204ENST00000486461 COPB2P35606 906 aa7.33□□□□□ -1.24
PDZD11-204ENST00000486461 RFX5P48382 616 aaPredicted RBP7.33□□□□□ -1.24
PDZD11-204ENST00000486461 NUBP1P53384 320 aa7.33□□□□□ -1.24
PDZD11-204ENST00000486461 ZXDAP98168 799 aa7.33□□□□□ -1.24
PDZD11-204ENST00000486461 TMEM132BQ14DG7 1078 aa7.33□□□□□ -1.24
PDZD11-204ENST00000486461 SMAD2Q15796 467 aaKnown RBP7.33□□□□□ -1.24
PDZD11-204ENST00000486461 CCDC27Q2M243 656 aa7.33□□□□□ -1.24
PDZD11-204ENST00000486461 CERKLQ49MI3 558 aaPredicted RBP7.33□□□□□ -1.24
PDZD11-204ENST00000486461 TIGD5Q53EQ6 642 aa7.33□□□□□ -1.24
PDZD11-204ENST00000486461 MAMDC4Q6UXC1 1216 aa7.33□□□□□ -1.24
PDZD11-204ENST00000486461 TBC1D9Q6ZT07 1266 aa7.33□□□□□ -1.24
PDZD11-204ENST00000486461 NOL8Q76FK4 1167 aaKnown RBP7.33□□□□□ -1.24
PDZD11-204ENST00000486461 RIOX2Q8IUF8 465 aa7.33□□□□□ -1.24
PDZD11-204ENST00000486461 RMDN1Q96DB5 314 aa7.33□□□□□ -1.24
PDZD11-204ENST00000486461 MRPL38Q96DV4 380 aaKnown RBP7.33□□□□□ -1.24
PDZD11-204ENST00000486461 CRBNQ96SW2 442 aa7.33□□□□□ -1.24
PDZD11-204ENST00000486461 ABHD16BQ9H3Z7 469 aa7.33□□□□□ -1.24
PDZD11-204ENST00000486461 CLDND1Q9NY35 253 aa7.33□□□□□ -1.24
PDZD11-204ENST00000486461 FBXO3Q9UK99 471 aa7.33□□□□□ -1.24
PDZD11-204ENST00000486461 COL11A1P12107 1806 aaPredicted RBP7.33□□□□□ -1.24
PDZD11-204ENST00000486461 TNKSO95271 1327 aa7.32□□□□□ -1.24
PDZD11-204ENST00000486461 FOCADQ5VW36 1801 aa7.32□□□□□ -1.24
PDZD11-204ENST00000486461 A0A1B0GUL7 405 aa7.32□□□□□ -1.24
PDZD11-204ENST00000486461 LINC01553A4QN01 128 aa7.32□□□□□ -1.24
PDZD11-204ENST00000486461 STXBP3O00186 592 aa7.32□□□□□ -1.24
PDZD11-204ENST00000486461 GALR2O43603 387 aaPredicted RBP7.32□□□□□ -1.24
PDZD11-204ENST00000486461 CIAO1O76071 339 aa7.32□□□□□ -1.24
PDZD11-204ENST00000486461 STAT3P40763 770 aa7.32□□□□□ -1.24
PDZD11-204ENST00000486461 NKX3-2P78367 333 aa7.32□□□□□ -1.24
PDZD11-204ENST00000486461 SIGLEC14Q08ET2 396 aa7.32□□□□□ -1.24
PDZD11-204ENST00000486461 COL9A2Q14055 689 aaPredicted RBP7.32□□□□□ -1.24
PDZD11-204ENST00000486461 TCEAL5Q5H9L2 206 aa7.32□□□□□ -1.24
PDZD11-204ENST00000486461 MCTP2Q6DN12 878 aa7.32□□□□□ -1.24
PDZD11-204ENST00000486461 RETREG2Q8NC44 543 aa7.32□□□□□ -1.24
PDZD11-204ENST00000486461 BANK1Q8NDB2 785 aa7.32□□□□□ -1.24
PDZD11-204ENST00000486461 FBXO22Q8NEZ5 403 aa7.32□□□□□ -1.24
PDZD11-204ENST00000486461 DDX11Q96FC9 970 aa7.32□□□□□ -1.24
PDZD11-204ENST00000486461 RAD9AQ99638 391 aa7.32□□□□□ -1.24
PDZD11-204ENST00000486461 ALDH8A1Q9H2A2 487 aaPredicted RBP7.32□□□□□ -1.24
PDZD11-204ENST00000486461 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.32□□□□□ -1.24
PDZD11-204ENST00000486461 LRP2BPQ9P2M1 347 aa7.32□□□□□ -1.24
PDZD11-204ENST00000486461 SERPINB13Q9UIV8 391 aa7.32□□□□□ -1.24
PDZD11-204ENST00000486461 MYH1P12882 1939 aa7.32□□□□□ -1.24
PDZD11-204ENST00000486461 A0A1W2PRG0 241 aa7.31□□□□□ -1.24
PDZD11-204ENST00000486461 MBTPS2O43462 519 aa7.31□□□□□ -1.24
PDZD11-204ENST00000486461 NCK2O43639 380 aa7.31□□□□□ -1.24
PDZD11-204ENST00000486461 IQCF3P0C7M6 154 aa7.31□□□□□ -1.24
PDZD11-204ENST00000486461 PPP4CP60510 307 aa7.31□□□□□ -1.24
PDZD11-204ENST00000486461 WDR5P61964 334 aaKnown RBP7.31□□□□□ -1.24
PDZD11-204ENST00000486461 TIMM10P62072 90 aa7.31□□□□□ -1.24
PDZD11-204ENST00000486461 PSMC6P62333 389 aa7.31□□□□□ -1.24
PDZD11-204ENST00000486461 PUM1Q14671 1186 aaKnown RBP eCLIP7.31□□□□□ -1.24
PDZD11-204ENST00000486461 MVPQ14764 893 aaKnown RBP7.31□□□□□ -1.24
PDZD11-204ENST00000486461 COL19A1Q14993 1142 aa7.31□□□□□ -1.24
PDZD11-204ENST00000486461 SEPT2Q15019 361 aa7.31□□□□□ -1.24
PDZD11-204ENST00000486461 CLUL1Q15846 466 aa7.31□□□□□ -1.24
PDZD11-204ENST00000486461 FSCN1Q16658 493 aaKnown RBP7.31□□□□□ -1.24
PDZD11-204ENST00000486461 NAA16Q6N069 864 aaPredicted RBP7.31□□□□□ -1.24
PDZD11-204ENST00000486461 TMCO2Q7Z6W1 182 aaPredicted RBP7.31□□□□□ -1.24
PDZD11-204ENST00000486461 ZNF467Q7Z7K2 595 aaPredicted RBP7.31□□□□□ -1.24
PDZD11-204ENST00000486461 AP5M1Q9H0R1 490 aa7.31□□□□□ -1.24
PDZD11-204ENST00000486461 TRMT13Q9NUP7 481 aaKnown RBP7.31□□□□□ -1.24
PDZD11-204ENST00000486461 HMG20BQ9P0W2 317 aa7.31□□□□□ -1.24
PDZD11-204ENST00000486461 EP300Q09472 2414 aaPredicted RBP7.31□□□□□ -1.24
PDZD11-204ENST00000486461 TRIP12Q14669 1992 aaPredicted RBP7.3□□□□□ -1.24
PDZD11-204ENST00000486461 PARP14Q460N5 1801 aa7.3□□□□□ -1.24
PDZD11-204ENST00000486461 GJB5O95377 273 aa7.3□□□□□ -1.24
PDZD11-204ENST00000486461 GUCY1A2P33402 732 aa7.3□□□□□ -1.24
PDZD11-204ENST00000486461 IL15P40933 162 aaPredicted RBP7.3□□□□□ -1.24
PDZD11-204ENST00000486461 TNFAIP2Q03169 654 aa7.3□□□□□ -1.24
PDZD11-204ENST00000486461 SMAD4Q13485 552 aaKnown RBP7.3□□□□□ -1.24
PDZD11-204ENST00000486461 ST3GAL2Q16842 350 aa7.3□□□□□ -1.24
PDZD11-204ENST00000486461 PI16Q6UXB8 463 aa7.3□□□□□ -1.24
PDZD11-204ENST00000486461 FRMD5Q7Z6J6 570 aa7.3□□□□□ -1.24
PDZD11-204ENST00000486461 RPAINQ86UA6 219 aa7.3□□□□□ -1.24
PDZD11-204ENST00000486461 TLK2Q86UE8 772 aa7.3□□□□□ -1.24
PDZD11-204ENST00000486461 SPICE1Q8N0Z3 855 aa7.3□□□□□ -1.24
PDZD11-204ENST00000486461 MAGEB6Q8N7X4 407 aa7.3□□□□□ -1.24
PDZD11-204ENST00000486461 SPATA5Q8NB90 893 aa7.3□□□□□ -1.24
PDZD11-204ENST00000486461 CCER1Q8TC90 406 aaPredicted RBP7.3□□□□□ -1.24
PDZD11-204ENST00000486461 XAGE2Q96GT9 111 aa7.3□□□□□ -1.24
PDZD11-204ENST00000486461 C17orf80Q9BSJ5 609 aa7.3□□□□□ -1.24
PDZD11-204ENST00000486461 EHD4Q9H223 541 aa7.3□□□□□ -1.24
PDZD11-204ENST00000486461 NSUN3Q9H649 340 aaKnown RBP7.3□□□□□ -1.24
PDZD11-204ENST00000486461 TANC1Q9C0D5 1861 aa7.3□□□□□ -1.24
PDZD11-204ENST00000486461 MAP1BP46821 2468 aaKnown RBP7.29□□□□□ -1.24
PDZD11-204ENST00000486461 ASTN1O14525 1302 aa7.29□□□□□ -1.24
PDZD11-204ENST00000486461 DNAJC25-GNG10A0A024R161 153 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms