RNA–Protein interactions for RNA: ENST00000486417.5

TMC1-204, Transcript of transmembrane channel like 1, humanhuman

TSL 2

Gene TMC1, Length 1,528 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-204ENST00000486417 CMTR1Q8N1G2 835 aaKnown RBP8.34□□□□□ -1.07
TMC1-204ENST00000486417 TTLL6Q8N841 843 aa8.34□□□□□ -1.07
TMC1-204ENST00000486417 ANKS1AQ92625 1134 aa8.34□□□□□ -1.07
TMC1-204ENST00000486417 KAT14Q9H8E8 782 aa8.34□□□□□ -1.07
TMC1-204ENST00000486417 ZNF287Q9HBT7 754 aa8.34□□□□□ -1.07
TMC1-204ENST00000486417 DDX4Q9NQI0 724 aaKnown RBP8.34□□□□□ -1.07
TMC1-204ENST00000486417 RTEL1Q9NZ71 1219 aa8.34□□□□□ -1.07
TMC1-204ENST00000486417 ZC3H4Q9UPT8 1303 aaKnown RBP8.34□□□□□ -1.07
TMC1-204ENST00000486417 MYH4Q9Y623 1939 aa8.34□□□□□ -1.07
TMC1-204ENST00000486417 GOLGA6L4A6NEF3 574 aa8.34□□□□□ -1.08
TMC1-204ENST00000486417 PPIP5K2O43314 1243 aa8.34□□□□□ -1.08
TMC1-204ENST00000486417 PRPF3O43395 683 aaKnown RBP8.34□□□□□ -1.08
TMC1-204ENST00000486417 LETM1O95202 739 aaPredicted RBP8.34□□□□□ -1.08
TMC1-204ENST00000486417 YEATS4O95619 227 aa8.34□□□□□ -1.08
TMC1-204ENST00000486417 S1PR4O95977 384 aa8.34□□□□□ -1.08
TMC1-204ENST00000486417 MMP1P03956 469 aa8.34□□□□□ -1.08
TMC1-204ENST00000486417 SKIP12755 728 aa8.34□□□□□ -1.08
TMC1-204ENST00000486417 DPEP1P16444 411 aa8.34□□□□□ -1.08
TMC1-204ENST00000486417 KCNA3P22001 575 aa8.34□□□□□ -1.08
TMC1-204ENST00000486417 NASPP49321 788 aaPredicted RBP8.34□□□□□ -1.08
TMC1-204ENST00000486417 APOBEC3HQ6NTF7 200 aaKnown RBP8.34□□□□□ -1.08
TMC1-204ENST00000486417 CDC42EP5Q6NZY7 148 aa8.34□□□□□ -1.08
TMC1-204ENST00000486417 CCDC125Q86Z20 511 aa8.34□□□□□ -1.08
TMC1-204ENST00000486417 ZNF444Q8N0Y2 327 aaPredicted RBP8.34□□□□□ -1.08
TMC1-204ENST00000486417 CTCFLQ8NI51 663 aaPredicted RBP8.34□□□□□ -1.08
TMC1-204ENST00000486417 ADAM32Q8TC27 787 aa8.34□□□□□ -1.08
TMC1-204ENST00000486417 BICD2Q8TD16 824 aa8.34□□□□□ -1.08
TMC1-204ENST00000486417 ZDHHC15Q96MV8 337 aa8.34□□□□□ -1.08
TMC1-204ENST00000486417 MAP3K14Q99558 947 aa8.34□□□□□ -1.08
TMC1-204ENST00000486417 PANK2Q9BZ23 570 aa8.34□□□□□ -1.08
TMC1-204ENST00000486417 OSBPL5Q9H0X9 879 aaPredicted RBP8.34□□□□□ -1.08
TMC1-204ENST00000486417 USP40Q9NVE5 1235 aa8.34□□□□□ -1.08
TMC1-204ENST00000486417 PCDHB9Q9Y5E1 797 aa8.34□□□□□ -1.08
TMC1-204ENST00000486417 YDJCA8MPS7 323 aa8.33□□□□□ -1.08
TMC1-204ENST00000486417 U2AF2P26368 475 aaKnown RBP eCLIP8.33□□□□□ -1.08
TMC1-204ENST00000486417 HDLBPQ00341 1268 aaKnown RBP8.33□□□□□ -1.08
TMC1-204ENST00000486417 AKAP17AQ02040 695 aaKnown RBP8.33□□□□□ -1.08
TMC1-204ENST00000486417 GABPAQ06546 454 aa8.33□□□□□ -1.08
TMC1-204ENST00000486417 GNL2Q13823 731 aaKnown RBP8.33□□□□□ -1.08
TMC1-204ENST00000486417 GRM4Q14833 912 aa8.33□□□□□ -1.08
TMC1-204ENST00000486417 STK38Q15208 465 aa8.33□□□□□ -1.08
TMC1-204ENST00000486417 PKN1Q16512 942 aa8.33□□□□□ -1.08
TMC1-204ENST00000486417 SH3BP5LQ7L8J4 393 aa8.33□□□□□ -1.08
TMC1-204ENST00000486417 KIAA0825Q8IV33 1275 aa8.33□□□□□ -1.08
TMC1-204ENST00000486417 CDAN1Q8IWY9 1227 aa8.33□□□□□ -1.08
TMC1-204ENST00000486417 RTKN2Q8IZC4 609 aa8.33□□□□□ -1.08
TMC1-204ENST00000486417 PHTF2Q8N3S3 785 aa8.33□□□□□ -1.08
TMC1-204ENST00000486417 LINC00301Q8NCQ3 95 aa8.33□□□□□ -1.08
TMC1-204ENST00000486417 NEDD1Q8NHV4 660 aa8.33□□□□□ -1.08
TMC1-204ENST00000486417 SHISA4Q96DD7 197 aa8.33□□□□□ -1.08
TMC1-204ENST00000486417 PSMD1Q99460 953 aa8.33□□□□□ -1.08
TMC1-204ENST00000486417 MRIQ9BWK5 157 aa8.33□□□□□ -1.08
TMC1-204ENST00000486417 SLC6A16Q9GZN6 736 aa8.33□□□□□ -1.08
TMC1-204ENST00000486417 RBSNQ9H1K0 784 aa8.33□□□□□ -1.08
TMC1-204ENST00000486417 TSPY26PQ9H489 355 aa8.33□□□□□ -1.08
TMC1-204ENST00000486417 DDX19AQ9NUU7 478 aaKnown RBP8.33□□□□□ -1.08
TMC1-204ENST00000486417 KCNJ14Q9UNX9 436 aa8.33□□□□□ -1.08
TMC1-204ENST00000486417 CLIC4Q9Y696 253 aa8.33□□□□□ -1.08
TMC1-204ENST00000486417 MYO3BQ8WXR4 1341 aa8.33□□□□□ -1.08
TMC1-204ENST00000486417 USP17L5A8MUK1 530 aa8.32□□□□□ -1.08
TMC1-204ENST00000486417 ATG7O95352 703 aa8.32□□□□□ -1.08
TMC1-204ENST00000486417 ZBTB7AO95365 584 aa8.32□□□□□ -1.08
TMC1-204ENST00000486417 PTK2Q05397 1052 aa8.32□□□□□ -1.08
TMC1-204ENST00000486417 SAFBQ15424 915 aaKnown RBP eCLIP8.32□□□□□ -1.08
TMC1-204ENST00000486417 LINC01559Q495D7 138 aa8.32□□□□□ -1.08
TMC1-204ENST00000486417 C4orf48Q5BLP8 95 aa8.32□□□□□ -1.08
TMC1-204ENST00000486417 ANO1Q5XXA6 986 aa8.32□□□□□ -1.08
TMC1-204ENST00000486417 USP17L2Q6R6M4 530 aa8.32□□□□□ -1.08
TMC1-204ENST00000486417 DIS3L2Q8IYB7 885 aaKnown RBP8.32□□□□□ -1.08
TMC1-204ENST00000486417 SRBD1Q8N5C6 995 aaKnown RBP8.32□□□□□ -1.08
TMC1-204ENST00000486417 KCNG4Q8TDN1 519 aa8.32□□□□□ -1.08
TMC1-204ENST00000486417 NUP62CLQ9H1M0 184 aa8.32□□□□□ -1.08
TMC1-204ENST00000486417 GOLPH3LQ9H4A5 285 aa8.32□□□□□ -1.08
TMC1-204ENST00000486417 CLSTN2Q9H4D0 955 aa8.32□□□□□ -1.08
TMC1-204ENST00000486417 DACT1Q9NYF0 836 aa8.32□□□□□ -1.08
TMC1-204ENST00000486417 ZMIZ1Q9ULJ6 1067 aa8.32□□□□□ -1.08
TMC1-204ENST00000486417 PCDHAC2Q9Y5I4 1007 aa8.32□□□□□ -1.08
TMC1-204ENST00000486417 COL2A1P02458 1487 aaPredicted RBP8.32□□□□□ -1.08
TMC1-204ENST00000486417 BTBD18B2RXH4 712 aa8.31□□□□□ -1.08
TMC1-204ENST00000486417 SPTLC2O15270 562 aa8.31□□□□□ -1.08
TMC1-204ENST00000486417 HLA-DOAP06340 250 aa8.31□□□□□ -1.08
TMC1-204ENST00000486417 XBP1P17861 261 aa8.31□□□□□ -1.08
TMC1-204ENST00000486417 KIF5BP33176 963 aa8.31□□□□□ -1.08
TMC1-204ENST00000486417 ME1P48163 572 aa8.31□□□□□ -1.08
TMC1-204ENST00000486417 NOVP48745 357 aa8.31□□□□□ -1.08
TMC1-204ENST00000486417 NFIAQ12857 509 aa8.31□□□□□ -1.08
TMC1-204ENST00000486417 NOSTRINQ8IVI9 506 aa8.31□□□□□ -1.08
TMC1-204ENST00000486417 CCAR1Q8IX12 1150 aaKnown RBP8.31□□□□□ -1.08
TMC1-204ENST00000486417 DHX37Q8IY37 1157 aaKnown RBP8.31□□□□□ -1.08
TMC1-204ENST00000486417 STK32AQ8WU08 396 aa8.31□□□□□ -1.08
TMC1-204ENST00000486417 BAP1Q92560 729 aa8.31□□□□□ -1.08
TMC1-204ENST00000486417 FOXJ1Q92949 421 aa8.31□□□□□ -1.08
TMC1-204ENST00000486417 TMEM47Q9BQJ4 181 aa8.31□□□□□ -1.08
TMC1-204ENST00000486417 ARHGAP9Q9BRR9 750 aa8.31□□□□□ -1.08
TMC1-204ENST00000486417 FUCA2Q9BTY2 467 aa8.31□□□□□ -1.08
TMC1-204ENST00000486417 PHF20Q9BVI0 1012 aa8.31□□□□□ -1.08
TMC1-204ENST00000486417 MTFR1LQ9H019 292 aa8.31□□□□□ -1.08
TMC1-204ENST00000486417 FOXP1Q9H334 677 aaPredicted RBP8.31□□□□□ -1.08
TMC1-204ENST00000486417 IL21Q9HBE4 155 aa8.31□□□□□ -1.08
TMC1-204ENST00000486417 VPS54Q9P1Q0 977 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms