RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 DIS3Q9Y2L1 958 aaKnown RBP15.14■□□□□ 0.01
CHMP3-208ENST00000486404 RIPK3Q9Y572 518 aa15.14■□□□□ 0.01
CHMP3-208ENST00000486404 H0YGN5 161 aa15.13■□□□□ 0.01
CHMP3-208ENST00000486404 NEFLP07196 543 aa15.13■□□□□ 0.01
CHMP3-208ENST00000486404 ALAS1P13196 640 aa15.13■□□□□ 0.01
CHMP3-208ENST00000486404 TRDNQ13061 729 aa15.13■□□□□ 0.01
CHMP3-208ENST00000486404 ZNF792Q3KQV3 632 aa15.13■□□□□ 0.01
CHMP3-208ENST00000486404 TKFCQ3LXA3 575 aa15.13■□□□□ 0.01
CHMP3-208ENST00000486404 SYDE2Q5VT97 1194 aa15.13■□□□□ 0.01
CHMP3-208ENST00000486404 TRPV1Q8NER1 839 aa15.13■□□□□ 0.01
CHMP3-208ENST00000486404 TINF2Q9BSI4 451 aa15.13■□□□□ 0.01
CHMP3-208ENST00000486404 CCPG1Q9ULG6 757 aa15.13■□□□□ 0.01
CHMP3-208ENST00000486404 U3KPZ7 1027 aaPredicted RBP15.13■□□□□ 0.01
CHMP3-208ENST00000486404 LCTP09848 1927 aa15.13■□□□□ 0.01
CHMP3-208ENST00000486404 TNKSO95271 1327 aa15.13■□□□□ 0.01
CHMP3-208ENST00000486404 SEPT4O43236 478 aa15.12■□□□□ 0.01
CHMP3-208ENST00000486404 PDHBP11177 359 aa15.12■□□□□ 0.01
CHMP3-208ENST00000486404 SLC16A2P36021 539 aa15.12■□□□□ 0.01
CHMP3-208ENST00000486404 SNAP25P60880 206 aa15.12■□□□□ 0.01
CHMP3-208ENST00000486404 LHX8Q68G74 356 aa15.12■□□□□ 0.01
CHMP3-208ENST00000486404 KIAA1211Q6ZU35 1233 aa15.12■□□□□ 0.01
CHMP3-208ENST00000486404 RALYLQ86SE5 291 aaKnown RBP15.12■□□□□ 0.01
CHMP3-208ENST00000486404 DGKHQ86XP1 1220 aa15.12■□□□□ 0.01
CHMP3-208ENST00000486404 AGBL1Q96MI9 1066 aa15.12■□□□□ 0.01
CHMP3-208ENST00000486404 ZSCAN10Q96SZ4 725 aaPredicted RBP15.12■□□□□ 0.01
CHMP3-208ENST00000486404 NRBP1Q9UHY1 535 aa15.12■□□□□ 0.01
CHMP3-208ENST00000486404 PFASO15067 1338 aa15.12■□□□□ 0.01
CHMP3-208ENST00000486404 SMCHD1A6NHR9 2005 aa15.11■□□□□ 0.01
CHMP3-208ENST00000486404 KBTBD13C9JR72 458 aa15.11■□□□□ 0.01
CHMP3-208ENST00000486404 SGSM2O43147 1006 aa15.11■□□□□ 0.01
CHMP3-208ENST00000486404 ZNF543Q08ER8 600 aa15.11■□□□□ 0.01
CHMP3-208ENST00000486404 ANO1Q5XXA6 986 aa15.11■□□□□ 0.01
CHMP3-208ENST00000486404 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.11■□□□□ 0.01
CHMP3-208ENST00000486404 C7orf61Q8IZ16 206 aa15.11■□□□□ 0.01
CHMP3-208ENST00000486404 MSL3Q8N5Y2 521 aaKnown RBP15.11■□□□□ 0.01
CHMP3-208ENST00000486404 PNMA1Q8ND90 353 aa15.11■□□□□ 0.01
CHMP3-208ENST00000486404 TRERF1Q96PN7 1200 aa15.11■□□□□ 0.01
CHMP3-208ENST00000486404 ZHX1Q9UKY1 873 aaPredicted RBP15.11■□□□□ 0.01
CHMP3-208ENST00000486404 ZNF536O15090 1300 aa15.11■□□□□ 0.01
CHMP3-208ENST00000486404 SYNGAP1Q96PV0 1343 aa15.11■□□□□ 0.01
CHMP3-208ENST00000486404 POTEB2H3BUK9 544 aa15.1■□□□□ 0.01
CHMP3-208ENST00000486404 DNM1LO00429 736 aa15.1■□□□□ 0.01
CHMP3-208ENST00000486404 IGHA2P01877 340 aa15.1■□□□□ 0.01
CHMP3-208ENST00000486404 ICAM1P05362 532 aa15.1■□□□□ 0.01
CHMP3-208ENST00000486404 RARBP10826 455 aa15.1■□□□□ 0.01
CHMP3-208ENST00000486404 PRAMEF19Q5SWL8 479 aa15.1■□□□□ 0.01
CHMP3-208ENST00000486404 GPATCH4Q5T3I0 446 aaKnown RBP15.1■□□□□ 0.01
CHMP3-208ENST00000486404 IFIT1BQ5T764 474 aaKnown RBP15.1■□□□□ 0.01
CHMP3-208ENST00000486404 TTBK2Q6IQ55 1244 aa15.1■□□□□ 0.01
CHMP3-208ENST00000486404 BTNL9Q6UXG8 535 aa15.1■□□□□ 0.01
CHMP3-208ENST00000486404 ENAHQ8N8S7 591 aaPredicted RBP15.1■□□□□ 0.01
CHMP3-208ENST00000486404 ARRDC4Q8NCT1 418 aa15.1■□□□□ 0.01
CHMP3-208ENST00000486404 CCDC136Q96JN2 1154 aa15.1■□□□□ 0.01
CHMP3-208ENST00000486404 RANBP17Q9H2T7 1088 aaKnown RBP15.1■□□□□ 0.01
CHMP3-208ENST00000486404 PNMA2Q9UL42 364 aa15.1■□□□□ 0.01
CHMP3-208ENST00000486404 DNAJC25-GNG10A0A024R161 153 aa15.09■□□□□ 0.01
CHMP3-208ENST00000486404 DHX16O60231 1041 aaKnown RBP15.09■□□□□ 0.01
CHMP3-208ENST00000486404 AKR1A1P14550 325 aa15.09■□□□□ 0.01
CHMP3-208ENST00000486404 MNX1P50219 401 aaPredicted RBP15.09■□□□□ 0.01
CHMP3-208ENST00000486404 PTH1RQ03431 593 aa15.09■□□□□ 0.01
CHMP3-208ENST00000486404 CASC1Q6TDU7 716 aa15.09■□□□□ 0.01
CHMP3-208ENST00000486404 NSMFQ6X4W1 530 aa15.09■□□□□ 0.01
CHMP3-208ENST00000486404 ZNF467Q7Z7K2 595 aaPredicted RBP15.09■□□□□ 0.01
CHMP3-208ENST00000486404 RNF39Q9H2S5 420 aa15.09■□□□□ 0.01
CHMP3-208ENST00000486404 A1CFQ9NQ94 594 aaKnown RBP15.09■□□□□ 0.01
CHMP3-208ENST00000486404 ZSWIM5Q9P217 1185 aa15.09■□□□□ 0.01
CHMP3-208ENST00000486404 ERICH2A1L162 156 aa15.08■□□□□ 0
CHMP3-208ENST00000486404 CYP21A2P08686 494 aa15.08■□□□□ 0
CHMP3-208ENST00000486404 GOLGA8HP0CJ92 632 aa15.08■□□□□ 0
CHMP3-208ENST00000486404 SNHG28P0DPA3 235 aa15.08■□□□□ 0
CHMP3-208ENST00000486404 SART3Q15020 963 aaKnown RBP15.08■□□□□ 0
CHMP3-208ENST00000486404 ASPRV1Q53RT3 343 aa15.08■□□□□ 0
CHMP3-208ENST00000486404 BMP2KLQ5H9B9 411 aa15.08■□□□□ 0
CHMP3-208ENST00000486404 GJC2Q5T442 439 aaPredicted RBP15.08■□□□□ 0
CHMP3-208ENST00000486404 XPNPEP3Q9NQH7 507 aa15.08■□□□□ 0
CHMP3-208ENST00000486404 PARP1P09874 1014 aaKnown RBP15.07■□□□□ 0
CHMP3-208ENST00000486404 COL6A1P12109 1028 aa15.07■□□□□ 0
CHMP3-208ENST00000486404 TAL1P17542 331 aaPredicted RBP15.07■□□□□ 0
CHMP3-208ENST00000486404 MAMDC4Q6UXC1 1216 aa15.07■□□□□ 0
CHMP3-208ENST00000486404 CHRDL2Q6WN34 429 aa15.07■□□□□ 0
CHMP3-208ENST00000486404 ARMCX2Q7L311 632 aa15.07■□□□□ 0
CHMP3-208ENST00000486404 NCOA7Q8NI08 942 aa15.07■□□□□ 0
CHMP3-208ENST00000486404 SENP6Q9GZR1 1112 aaPredicted RBP15.07■□□□□ 0
CHMP3-208ENST00000486404 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.07■□□□□ 0
CHMP3-208ENST00000486404 RBM8AQ9Y5S9 174 aaKnown RBP15.07■□□□□ 0
CHMP3-208ENST00000486404 PTPDC1A2A3K4 754 aa15.06■□□□□ 0
CHMP3-208ENST00000486404 ASB14A6NK59 587 aa15.06■□□□□ 0
CHMP3-208ENST00000486404 CNTN2Q02246 1040 aa15.06■□□□□ 0
CHMP3-208ENST00000486404 CDC37Q16543 378 aaPredicted RBP15.06■□□□□ 0
CHMP3-208ENST00000486404 MUM1L1Q5H9M0 696 aa15.06■□□□□ 0
CHMP3-208ENST00000486404 RNF180Q86T96 592 aa15.06■□□□□ 0
CHMP3-208ENST00000486404 SKAP1Q86WV1 359 aa15.06■□□□□ 0
CHMP3-208ENST00000486404 ANKS1AQ92625 1134 aa15.06■□□□□ 0
CHMP3-208ENST00000486404 LENG1Q96BZ8 264 aaPredicted RBP15.06■□□□□ 0
CHMP3-208ENST00000486404 ESYT1Q9BSJ8 1104 aa15.06■□□□□ 0
CHMP3-208ENST00000486404 ANO2Q9NQ90 1003 aa15.06■□□□□ 0
CHMP3-208ENST00000486404 FAM184BQ9ULE4 1060 aa15.06■□□□□ 0
CHMP3-208ENST00000486404 WDR19Q8NEZ3 1342 aa15.06■□□□□ 0
CHMP3-208ENST00000486404 E7EWF7 191 aa15.05■□□□□ -0
CHMP3-208ENST00000486404 IFIT3O14879 490 aaKnown RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms