RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 MYADML2A6NDP7 307 aa11.1□□□□□ -0.63
TMEM39A-208ENST00000486159 ADCY6O43306 1168 aa11.1□□□□□ -0.63
TMEM39A-208ENST00000486159 NMT2O60551 498 aa11.1□□□□□ -0.63
TMEM39A-208ENST00000486159 MSCO60682 206 aa11.1□□□□□ -0.63
TMEM39A-208ENST00000486159 SLC25A27O95847 323 aa11.1□□□□□ -0.63
TMEM39A-208ENST00000486159 CTDSPL2Q05D32 466 aa11.1□□□□□ -0.63
TMEM39A-208ENST00000486159 SHHQ15465 462 aa11.1□□□□□ -0.63
TMEM39A-208ENST00000486159 VPS53Q5VIR6 699 aa11.1□□□□□ -0.63
TMEM39A-208ENST00000486159 SNRNP48Q6IEG0 339 aaKnown RBP11.1□□□□□ -0.63
TMEM39A-208ENST00000486159 TICAM2Q86XR7 235 aa11.1□□□□□ -0.63
TMEM39A-208ENST00000486159 ARRDC4Q8NCT1 418 aa11.1□□□□□ -0.63
TMEM39A-208ENST00000486159 BADQ92934 168 aa11.1□□□□□ -0.63
TMEM39A-208ENST00000486159 SNX21Q969T3 373 aa11.1□□□□□ -0.63
TMEM39A-208ENST00000486159 KIFC2Q96AC6 838 aa11.1□□□□□ -0.63
TMEM39A-208ENST00000486159 FGD4Q96M96 766 aa11.1□□□□□ -0.63
TMEM39A-208ENST00000486159 SLF1Q9BQI6 1058 aa11.1□□□□□ -0.63
TMEM39A-208ENST00000486159 TINF2Q9BSI4 451 aa11.1□□□□□ -0.63
TMEM39A-208ENST00000486159 MTMR10Q9NXD2 777 aa11.1□□□□□ -0.63
TMEM39A-208ENST00000486159 RAPGEFL1Q9UHV5 662 aa11.1□□□□□ -0.63
TMEM39A-208ENST00000486159 MCM3APO60318 1980 aa11.09□□□□□ -0.63
TMEM39A-208ENST00000486159 KBTBD13C9JR72 458 aa11.09□□□□□ -0.63
TMEM39A-208ENST00000486159 PYGBP11216 843 aa11.09□□□□□ -0.63
TMEM39A-208ENST00000486159 PLA2G5P39877 138 aa11.09□□□□□ -0.63
TMEM39A-208ENST00000486159 EPHB4P54760 987 aa11.09□□□□□ -0.63
TMEM39A-208ENST00000486159 TFAP4Q01664 338 aa11.09□□□□□ -0.63
TMEM39A-208ENST00000486159 KCTD2Q14681 263 aa11.09□□□□□ -0.63
TMEM39A-208ENST00000486159 ZMYM1Q5SVZ6 1142 aa11.09□□□□□ -0.63
TMEM39A-208ENST00000486159 GIMAP6Q6P9H5 292 aa11.09□□□□□ -0.63
TMEM39A-208ENST00000486159 ZNF444Q8N0Y2 327 aaPredicted RBP11.09□□□□□ -0.63
TMEM39A-208ENST00000486159 ZNF579Q8NAF0 562 aaKnown RBP11.09□□□□□ -0.63
TMEM39A-208ENST00000486159 ANP32EQ9BTT0 268 aa11.09□□□□□ -0.63
TMEM39A-208ENST00000486159 FSD1Q9BTV5 496 aa11.09□□□□□ -0.63
TMEM39A-208ENST00000486159 XPNPEP3Q9NQH7 507 aa11.09□□□□□ -0.63
TMEM39A-208ENST00000486159 PDLIM7Q9NR12 457 aa11.09□□□□□ -0.63
TMEM39A-208ENST00000486159 MTMR4Q9NYA4 1195 aa11.09□□□□□ -0.63
TMEM39A-208ENST00000486159 DNAJC25-GNG10A0A024R161 153 aa11.08□□□□□ -0.64
TMEM39A-208ENST00000486159 ADAMTS4O75173 837 aa11.08□□□□□ -0.64
TMEM39A-208ENST00000486159 TLE2Q04725 743 aa11.08□□□□□ -0.64
TMEM39A-208ENST00000486159 PPARAQ07869 468 aa11.08□□□□□ -0.64
TMEM39A-208ENST00000486159 SNX17Q15036 470 aa11.08□□□□□ -0.64
TMEM39A-208ENST00000486159 TMEM63BQ5T3F8 832 aa11.08□□□□□ -0.64
TMEM39A-208ENST00000486159 SLFN13Q68D06 897 aa11.08□□□□□ -0.64
TMEM39A-208ENST00000486159 MKL1Q969V6 931 aa11.08□□□□□ -0.64
TMEM39A-208ENST00000486159 GUCD1Q96NT3 240 aa11.08□□□□□ -0.64
TMEM39A-208ENST00000486159 PURBQ96QR8 312 aaKnown RBP11.08□□□□□ -0.64
TMEM39A-208ENST00000486159 LBHD1Q9BQE6 289 aaPredicted RBP11.08□□□□□ -0.64
TMEM39A-208ENST00000486159 IL17RBQ9NRM6 502 aa11.08□□□□□ -0.64
TMEM39A-208ENST00000486159 HOMER2Q9NSB8 354 aa11.08□□□□□ -0.64
TMEM39A-208ENST00000486159 SLC5A4Q9NY91 659 aa11.08□□□□□ -0.64
TMEM39A-208ENST00000486159 MTMR7Q9Y216 660 aa11.08□□□□□ -0.64
TMEM39A-208ENST00000486159 TRIM6-TRIM34B2RNG4 842 aa11.07□□□□□ -0.64
TMEM39A-208ENST00000486159 POTEB2H3BUK9 544 aa11.07□□□□□ -0.64
TMEM39A-208ENST00000486159 RBAK-RBAKDNI3L0D1 243 aa11.07□□□□□ -0.64
TMEM39A-208ENST00000486159 HIP1O00291 1037 aa11.07□□□□□ -0.64
TMEM39A-208ENST00000486159 ZFYP08048 801 aaPredicted RBP11.07□□□□□ -0.64
TMEM39A-208ENST00000486159 RARBP10826 455 aa11.07□□□□□ -0.64
TMEM39A-208ENST00000486159 MCCP23508 829 aa11.07□□□□□ -0.64
TMEM39A-208ENST00000486159 CNTN2Q02246 1040 aa11.07□□□□□ -0.64
TMEM39A-208ENST00000486159 PRPF38AQ8NAV1 312 aaKnown RBP11.07□□□□□ -0.64
TMEM39A-208ENST00000486159 NEDD1Q8NHV4 660 aa11.07□□□□□ -0.64
TMEM39A-208ENST00000486159 FAM122AQ96E09 287 aa11.07□□□□□ -0.64
TMEM39A-208ENST00000486159 SNX27Q96L92 541 aa11.07□□□□□ -0.64
TMEM39A-208ENST00000486159 FAM227BQ96M60 508 aa11.07□□□□□ -0.64
TMEM39A-208ENST00000486159 AGBL1Q96MI9 1066 aa11.07□□□□□ -0.64
TMEM39A-208ENST00000486159 TEX13BQ9BXU2 312 aa11.07□□□□□ -0.64
TMEM39A-208ENST00000486159 USP26Q9BXU7 913 aa11.07□□□□□ -0.64
TMEM39A-208ENST00000486159 NAPBQ9H115 298 aa11.07□□□□□ -0.64
TMEM39A-208ENST00000486159 SLC38A10Q9HBR0 1119 aa11.07□□□□□ -0.64
TMEM39A-208ENST00000486159 ZHX1Q9UKY1 873 aaPredicted RBP11.07□□□□□ -0.64
TMEM39A-208ENST00000486159 PHF24Q9UPV7 400 aa11.07□□□□□ -0.64
TMEM39A-208ENST00000486159 DIS3Q9Y2L1 958 aaKnown RBP11.07□□□□□ -0.64
TMEM39A-208ENST00000486159 ZNF536O15090 1300 aa11.07□□□□□ -0.64
TMEM39A-208ENST00000486159 EYSQ5T1H1 3165 aa11.06□□□□□ -0.64
TMEM39A-208ENST00000486159 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.06□□□□□ -0.64
TMEM39A-208ENST00000486159 A0A1W2PQ45 241 aaPredicted RBP11.06□□□□□ -0.64
TMEM39A-208ENST00000486159 A0A1W2PQY0 241 aa11.06□□□□□ -0.64
TMEM39A-208ENST00000486159 TMEM232C9JQI7 657 aa11.06□□□□□ -0.64
TMEM39A-208ENST00000486159 PQBP1O60828 265 aaKnown RBP11.06□□□□□ -0.64
TMEM39A-208ENST00000486159 ZBED4O75132 1171 aa11.06□□□□□ -0.64
TMEM39A-208ENST00000486159 TTLL1O95922 423 aa11.06□□□□□ -0.64
TMEM39A-208ENST00000486159 TSPY3P0CV98 308 aa11.06□□□□□ -0.64
TMEM39A-208ENST00000486159 TSPY8P0CW00 308 aa11.06□□□□□ -0.64
TMEM39A-208ENST00000486159 BMP3P12645 472 aa11.06□□□□□ -0.64
TMEM39A-208ENST00000486159 GNAT2P19087 354 aa11.06□□□□□ -0.64
TMEM39A-208ENST00000486159 CHMLP26374 656 aa11.06□□□□□ -0.64
TMEM39A-208ENST00000486159 RABEP1Q15276 862 aa11.06□□□□□ -0.64
TMEM39A-208ENST00000486159 CCSAPQ6IQ19 270 aaPredicted RBP11.06□□□□□ -0.64
TMEM39A-208ENST00000486159 KCTD1Q719H9 257 aa11.06□□□□□ -0.64
TMEM39A-208ENST00000486159 HSCBQ8IWL3 235 aa11.06□□□□□ -0.64
TMEM39A-208ENST00000486159 RUFY2Q8WXA3 655 aa11.06□□□□□ -0.64
TMEM39A-208ENST00000486159 EVI5LQ96CN4 794 aa11.06□□□□□ -0.64
TMEM39A-208ENST00000486159 DDX11Q96FC9 970 aa11.06□□□□□ -0.64
TMEM39A-208ENST00000486159 ESYT1Q9BSJ8 1104 aa11.06□□□□□ -0.64
TMEM39A-208ENST00000486159 ISY1Q9ULR0 285 aaKnown RBP11.06□□□□□ -0.64
TMEM39A-208ENST00000486159 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.06□□□□□ -0.64
TMEM39A-208ENST00000486159 UNC80Q8N2C7 3258 aa11.06□□□□□ -0.64
TMEM39A-208ENST00000486159 ASTN1O14525 1302 aa11.06□□□□□ -0.64
TMEM39A-208ENST00000486159 SYNRGQ9UMZ2 1314 aa11.06□□□□□ -0.64
TMEM39A-208ENST00000486159 A0A0D9SFI3 127 aa11.05□□□□□ -0.64
TMEM39A-208ENST00000486159 SOWAHBA6NEL2 793 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms