RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 CNPY2Q9Y2B0 182 aa21.67■■□□□ 1.06
PRPF40A-209ENST00000486100 SNAP25P60880 206 aa21.66■■□□□ 1.06
PRPF40A-209ENST00000486100 LRRC26Q2I0M4 334 aa21.66■■□□□ 1.06
PRPF40A-209ENST00000486100 CCDC178Q5BJE1 867 aa21.66■■□□□ 1.06
PRPF40A-209ENST00000486100 GJC2Q5T442 439 aaPredicted RBP21.66■■□□□ 1.06
PRPF40A-209ENST00000486100 CCDC174Q6PII3 467 aa21.66■■□□□ 1.06
PRPF40A-209ENST00000486100 RUFY2Q8WXA3 655 aa21.66■■□□□ 1.06
PRPF40A-209ENST00000486100 TRERF1Q96PN7 1200 aa21.66■■□□□ 1.06
PRPF40A-209ENST00000486100 PRO3102Q9H379 93 aa21.66■■□□□ 1.06
PRPF40A-209ENST00000486100 RBM27Q9P2N5 1060 aaKnown RBP21.66■■□□□ 1.06
PRPF40A-209ENST00000486100 RAD50Q92878 1312 aa21.65■■□□□ 1.06
PRPF40A-209ENST00000486100 KDM4AO75164 1064 aa21.65■■□□□ 1.06
PRPF40A-209ENST00000486100 SNAI1O95863 264 aaPredicted RBP21.65■■□□□ 1.06
PRPF40A-209ENST00000486100 PDHBP11177 359 aa21.65■■□□□ 1.06
PRPF40A-209ENST00000486100 CHMLP26374 656 aa21.65■■□□□ 1.06
PRPF40A-209ENST00000486100 SLC16A2P36021 539 aa21.65■■□□□ 1.06
PRPF40A-209ENST00000486100 IQCA1Q86XH1 822 aa21.65■■□□□ 1.06
PRPF40A-209ENST00000486100 ZKSCAN3Q9BRR0 538 aa21.65■■□□□ 1.06
PRPF40A-209ENST00000486100 GPCPD1Q9NPB8 672 aa21.65■■□□□ 1.06
PRPF40A-209ENST00000486100 RNF146Q9NTX7 359 aa21.65■■□□□ 1.06
PRPF40A-209ENST00000486100 KBTBD13C9JR72 458 aa21.64■■□□□ 1.05
PRPF40A-209ENST00000486100 SNHG28P0DPA3 235 aa21.64■■□□□ 1.05
PRPF40A-209ENST00000486100 RARBP10826 455 aa21.64■■□□□ 1.05
PRPF40A-209ENST00000486100 ALAS1P13196 640 aa21.64■■□□□ 1.05
PRPF40A-209ENST00000486100 AKR1A1P14550 325 aa21.64■■□□□ 1.05
PRPF40A-209ENST00000486100 SYDE2Q5VT97 1194 aa21.64■■□□□ 1.05
PRPF40A-209ENST00000486100 RANBP17Q9H2T7 1088 aaKnown RBP21.64■■□□□ 1.05
PRPF40A-209ENST00000486100 ZSWIM5Q9P217 1185 aa21.64■■□□□ 1.05
PRPF40A-209ENST00000486100 ZMYND8Q9ULU4 1186 aaPredicted RBP21.64■■□□□ 1.05
PRPF40A-209ENST00000486100 FRMPD2Q68DX3 1309 aaPredicted RBP21.63■■□□□ 1.05
PRPF40A-209ENST00000486100 B4E1Z4 1266 aa21.63■■□□□ 1.05
PRPF40A-209ENST00000486100 POTEB2H3BUK9 544 aa21.63■■□□□ 1.05
PRPF40A-209ENST00000486100 ICAM1P05362 532 aa21.63■■□□□ 1.05
PRPF40A-209ENST00000486100 LRRC41Q15345 812 aa21.63■■□□□ 1.05
PRPF40A-209ENST00000486100 ANKS1AQ92625 1134 aa21.63■■□□□ 1.05
PRPF40A-209ENST00000486100 FGD4Q96M96 766 aa21.63■■□□□ 1.05
PRPF40A-209ENST00000486100 KRT23Q9C075 422 aa21.63■■□□□ 1.05
PRPF40A-209ENST00000486100 A1CFQ9NQ94 594 aaKnown RBP21.63■■□□□ 1.05
PRPF40A-209ENST00000486100 XPNPEP3Q9NQH7 507 aa21.63■■□□□ 1.05
PRPF40A-209ENST00000486100 CCPG1Q9ULG6 757 aa21.63■■□□□ 1.05
PRPF40A-209ENST00000486100 ZNFX1Q9P2E3 1918 aaKnown RBP21.63■■□□□ 1.05
PRPF40A-209ENST00000486100 CEP290O15078 2479 aa21.62■■□□□ 1.05
PRPF40A-209ENST00000486100 MYCNP04198 464 aaPredicted RBP21.62■■□□□ 1.05
PRPF40A-209ENST00000486100 CNTN2Q02246 1040 aa21.62■■□□□ 1.05
PRPF40A-209ENST00000486100 ZNF543Q08ER8 600 aa21.62■■□□□ 1.05
PRPF40A-209ENST00000486100 FAM133AQ8N9E0 248 aa21.62■■□□□ 1.05
PRPF40A-209ENST00000486100 ZSCAN10Q96SZ4 725 aaPredicted RBP21.62■■□□□ 1.05
PRPF40A-209ENST00000486100 CNNM2Q9H8M5 875 aa21.62■■□□□ 1.05
PRPF40A-209ENST00000486100 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.62■■□□□ 1.05
PRPF40A-209ENST00000486100 FAM184BQ9ULE4 1060 aa21.62■■□□□ 1.05
PRPF40A-209ENST00000486100 SYN1P17600 705 aa21.61■■□□□ 1.05
PRPF40A-209ENST00000486100 FXR1P51114 621 aaKnown RBP eCLIP21.61■■□□□ 1.055e-6■■■□□ 17
PRPF40A-209ENST00000486100 ATN1P54259 1190 aaPredicted RBP21.61■■□□□ 1.05
PRPF40A-209ENST00000486100 ACVR2BQ13705 512 aa21.61■■□□□ 1.05
PRPF40A-209ENST00000486100 MUM1L1Q5H9M0 696 aa21.61■■□□□ 1.05
PRPF40A-209ENST00000486100 GDF15Q99988 308 aa21.61■■□□□ 1.05
PRPF40A-209ENST00000486100 ABHD16BQ9H3Z7 469 aa21.61■■□□□ 1.05
PRPF40A-209ENST00000486100 ZHX1Q9UKY1 873 aaPredicted RBP21.61■■□□□ 1.05
PRPF40A-209ENST00000486100 GPATCH4Q5T3I0 446 aaKnown RBP21.6■■□□□ 1.05
PRPF40A-209ENST00000486100 SLC39A5Q6ZMH5 540 aa21.6■■□□□ 1.05
PRPF40A-209ENST00000486100 ARMCX2Q7L311 632 aa21.6■■□□□ 1.05
PRPF40A-209ENST00000486100 RNF180Q86T96 592 aa21.6■■□□□ 1.05
PRPF40A-209ENST00000486100 PNMA1Q8ND90 353 aa21.6■■□□□ 1.05
PRPF40A-209ENST00000486100 KAT14Q9H8E8 782 aa21.6■■□□□ 1.05
PRPF40A-209ENST00000486100 PNMA2Q9UL42 364 aa21.6■■□□□ 1.05
PRPF40A-209ENST00000486100 SOWAHBA6NEL2 793 aa21.59■■□□□ 1.05
PRPF40A-209ENST00000486100 PGK1P00558 417 aa21.59■■□□□ 1.05
PRPF40A-209ENST00000486100 BMP8BP34820 402 aa21.59■■□□□ 1.05
PRPF40A-209ENST00000486100 ADCYAP1R1P41586 468 aa21.59■■□□□ 1.05
PRPF40A-209ENST00000486100 PTH1RQ03431 593 aa21.59■■□□□ 1.05
PRPF40A-209ENST00000486100 CCDC144CPQ8IYA2 1237 aa21.59■■□□□ 1.05
PRPF40A-209ENST00000486100 ENAHQ8N8S7 591 aaPredicted RBP21.59■■□□□ 1.05
PRPF40A-209ENST00000486100 CYP39A1Q9NYL5 469 aa21.59■■□□□ 1.05
PRPF40A-209ENST00000486100 A0A1W2PPC1 479 aa21.58■■□□□ 1.05
PRPF40A-209ENST00000486100 ASB14A6NK59 587 aa21.58■■□□□ 1.05
PRPF40A-209ENST00000486100 SGSM2O43147 1006 aa21.58■■□□□ 1.05
PRPF40A-209ENST00000486100 NSMFQ6X4W1 530 aa21.58■■□□□ 1.05
PRPF40A-209ENST00000486100 PHF24Q9UPV7 400 aa21.58■■□□□ 1.05
PRPF40A-209ENST00000486100 U3KPZ7 1027 aaPredicted RBP21.58■■□□□ 1.05
PRPF40A-209ENST00000486100 TNKSO95271 1327 aa21.57■■□□□ 1.04
PRPF40A-209ENST00000486100 ALPK3Q96L96 1907 aa21.57■■□□□ 1.04
PRPF40A-209ENST00000486100 ADAMTS4O75173 837 aa21.57■■□□□ 1.04
PRPF40A-209ENST00000486100 DUSP11O75319 330 aaKnown RBP21.57■■□□□ 1.04
PRPF40A-209ENST00000486100 GOLGA8HP0CJ92 632 aa21.57■■□□□ 1.04
PRPF40A-209ENST00000486100 RTP1P59025 263 aa21.57■■□□□ 1.04
PRPF40A-209ENST00000486100 FERMT2Q96AC1 680 aa21.57■■□□□ 1.04
PRPF40A-209ENST00000486100 LENG1Q96BZ8 264 aaPredicted RBP21.57■■□□□ 1.04
PRPF40A-209ENST00000486100 UBAC1Q9BSL1 405 aa21.57■■□□□ 1.04
PRPF40A-209ENST00000486100 KATNBL1Q9H079 304 aa21.57■■□□□ 1.04
PRPF40A-209ENST00000486100 CYP21A2P08686 494 aa21.56■■□□□ 1.04
PRPF40A-209ENST00000486100 MAGEA10P43363 369 aaPredicted RBP21.56■■□□□ 1.04
PRPF40A-209ENST00000486100 TRDNQ13061 729 aa21.56■■□□□ 1.04
PRPF40A-209ENST00000486100 CCDC144BQ3MJ40 725 aa21.56■■□□□ 1.04
PRPF40A-209ENST00000486100 C1orf53Q5VUE5 145 aa21.56■■□□□ 1.04
PRPF40A-209ENST00000486100 TSEN34Q9BSV6 310 aaKnown RBP21.56■■□□□ 1.04
PRPF40A-209ENST00000486100 UBA5Q9GZZ9 404 aa21.56■■□□□ 1.04
PRPF40A-209ENST00000486100 FRMPD3Q5JV73 1810 aa21.55■■□□□ 1.04
PRPF40A-209ENST00000486100 BAATQ14032 418 aaPredicted RBP21.55■■□□□ 1.04
PRPF40A-209ENST00000486100 SNX17Q15036 470 aa21.55■■□□□ 1.04
PRPF40A-209ENST00000486100 KLHDC9Q8NEP7 349 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms