RNA–Protein interactions for RNA: ENST00000486018.1

TPM2-206, Transcript of tropomyosin 2, humanhuman

TSL 2

Gene TPM2, Length 699 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-206ENST00000486018 RABGAP1Q9Y3P9 1069 aa18.24■□□□□ 0.51
TPM2-206ENST00000486018 ST18O60284 1047 aa18.23■□□□□ 0.51
TPM2-206ENST00000486018 PEX10O60683 326 aa18.23■□□□□ 0.51
TPM2-206ENST00000486018 LARGE1O95461 756 aa18.23■□□□□ 0.51
TPM2-206ENST00000486018 ADD1P35611 737 aaKnown RBP18.23■□□□□ 0.51
TPM2-206ENST00000486018 ST3GAL1Q11201 340 aa18.23■□□□□ 0.51
TPM2-206ENST00000486018 TMEM132BQ14DG7 1078 aa18.23■□□□□ 0.51
TPM2-206ENST00000486018 ADGRF4Q8IZF3 695 aa18.23■□□□□ 0.51
TPM2-206ENST00000486018 SMCR8Q8TEV9 937 aaPredicted RBP18.23■□□□□ 0.51
TPM2-206ENST00000486018 KIFC2Q96AC6 838 aa18.23■□□□□ 0.51
TPM2-206ENST00000486018 EFCC1Q9HA90 598 aa18.23■□□□□ 0.51
TPM2-206ENST00000486018 ZNF214Q9UL59 606 aaPredicted RBP18.23■□□□□ 0.51
TPM2-206ENST00000486018 HTTP42858 3142 aa18.22■□□□□ 0.51
TPM2-206ENST00000486018 OAZ1P54368 228 aa18.22■□□□□ 0.51
TPM2-206ENST00000486018 SCRN1Q12765 414 aa18.22■□□□□ 0.51
TPM2-206ENST00000486018 FAM110CQ1W6H9 321 aa18.22■□□□□ 0.51
TPM2-206ENST00000486018 Q3C1V9 767 aa18.22■□□□□ 0.51
TPM2-206ENST00000486018 NCOA5Q9HCD5 579 aaKnown RBP18.22■□□□□ 0.51
TPM2-206ENST00000486018 CPA4Q9UI42 421 aa18.22■□□□□ 0.51
TPM2-206ENST00000486018 CCDC196A0A1B0GTZ2 297 aa18.21■□□□□ 0.51
TPM2-206ENST00000486018 CCT2P78371 535 aaKnown RBP18.21■□□□□ 0.51
TPM2-206ENST00000486018 CMTR1Q8N1G2 835 aaKnown RBP18.21■□□□□ 0.51
TPM2-206ENST00000486018 ANKRD13CQ8N6S4 541 aa18.21■□□□□ 0.51
TPM2-206ENST00000486018 RBBP6Q7Z6E9 1792 aaKnown RBP18.21■□□□□ 0.51
TPM2-206ENST00000486018 COL11A1P12107 1806 aaPredicted RBP18.21■□□□□ 0.51
TPM2-206ENST00000486018 CNTNAP5Q8WYK1 1306 aa18.21■□□□□ 0.51
TPM2-206ENST00000486018 ZBED4O75132 1171 aa18.2■□□□□ 0.5
TPM2-206ENST00000486018 MCM2P49736 904 aa18.2■□□□□ 0.5
TPM2-206ENST00000486018 ERVK-9P63128 1117 aa18.2■□□□□ 0.5
TPM2-206ENST00000486018 ERVK-24P63145 666 aa18.2■□□□□ 0.5
TPM2-206ENST00000486018 IKQ13123 557 aaPredicted RBP18.2■□□□□ 0.5
TPM2-206ENST00000486018 GPRC5AQ8NFJ5 357 aa18.2■□□□□ 0.5
TPM2-206ENST00000486018 GTF3C6Q969F1 213 aa18.2■□□□□ 0.5
TPM2-206ENST00000486018 ZSCAN31Q96LW9 406 aaPredicted RBP18.2■□□□□ 0.5
TPM2-206ENST00000486018 SPATC1LQ9H0A9 340 aa18.2■□□□□ 0.5
TPM2-206ENST00000486018 SLKQ9H2G2 1235 aaPredicted RBP18.2■□□□□ 0.5
TPM2-206ENST00000486018 ISY1Q9ULR0 285 aaKnown RBP18.2■□□□□ 0.5
TPM2-206ENST00000486018 CENPFP49454 3210 aa18.19■□□□□ 0.5
TPM2-206ENST00000486018 CTDNEP1O95476 244 aa18.19■□□□□ 0.5
TPM2-206ENST00000486018 ICAM1P05362 532 aa18.19■□□□□ 0.5
TPM2-206ENST00000486018 IFNAR1P17181 557 aa18.19■□□□□ 0.5
TPM2-206ENST00000486018 EN2P19622 333 aaPredicted RBP18.19■□□□□ 0.5
TPM2-206ENST00000486018 SNAP25P60880 206 aa18.19■□□□□ 0.5
TPM2-206ENST00000486018 CDC37Q16543 378 aaPredicted RBP18.19■□□□□ 0.5
TPM2-206ENST00000486018 QRICH1Q2TAL8 776 aa18.19■□□□□ 0.5
TPM2-206ENST00000486018 NOL8Q76FK4 1167 aaKnown RBP18.19■□□□□ 0.5
TPM2-206ENST00000486018 RIOX2Q8IUF8 465 aa18.19■□□□□ 0.5
TPM2-206ENST00000486018 SNX21Q969T3 373 aa18.19■□□□□ 0.5
TPM2-206ENST00000486018 MOV10L1Q9BXT6 1211 aaKnown RBP18.19■□□□□ 0.5
TPM2-206ENST00000486018 SH2B1Q9NRF2 756 aaPredicted RBP18.19■□□□□ 0.5
TPM2-206ENST00000486018 BAZ2BQ9UIF8 2168 aaKnown RBP18.19■□□□□ 0.5
TPM2-206ENST00000486018 NAP1L2Q9ULW6 460 aaPredicted RBP18.19■□□□□ 0.5
TPM2-206ENST00000486018 KIAA0100Q14667 2235 aaKnown RBP18.19■□□□□ 0.5
TPM2-206ENST00000486018 ZBTB5O15062 677 aa18.18■□□□□ 0.5
TPM2-206ENST00000486018 PPP1R11O60927 126 aaPredicted RBP18.18■□□□□ 0.5
TPM2-206ENST00000486018 STAT3P40763 770 aa18.18■□□□□ 0.5
TPM2-206ENST00000486018 STK3Q13188 491 aa18.18■□□□□ 0.5
TPM2-206ENST00000486018 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.18■□□□□ 0.5
TPM2-206ENST00000486018 NECAB1Q8N987 351 aa18.18■□□□□ 0.5
TPM2-206ENST00000486018 SHCBP1Q8NEM2 672 aa18.18■□□□□ 0.5
TPM2-206ENST00000486018 ARMC5Q96C12 935 aa18.18■□□□□ 0.5
TPM2-206ENST00000486018 PIGSQ96S52 555 aa18.18■□□□□ 0.5
TPM2-206ENST00000486018 PAGR1Q9BTK6 254 aa18.18■□□□□ 0.5
TPM2-206ENST00000486018 TEX13BQ9BXU2 312 aa18.18■□□□□ 0.5
TPM2-206ENST00000486018 ARHGAP39Q9C0H5 1083 aa18.18■□□□□ 0.5
TPM2-206ENST00000486018 RAVER2Q9HCJ3 691 aaKnown RBP18.18■□□□□ 0.5
TPM2-206ENST00000486018 VAT1LQ9HCJ6 419 aa18.18■□□□□ 0.5
TPM2-206ENST00000486018 PNMA6FA0A0J9YX94 578 aa18.17■□□□□ 0.5
TPM2-206ENST00000486018 ECM2O94769 699 aaPredicted RBP18.17■□□□□ 0.5
TPM2-206ENST00000486018 CTGFP29279 349 aa18.17■□□□□ 0.5
TPM2-206ENST00000486018 SAMD1Q6SPF0 538 aaPredicted RBP18.17■□□□□ 0.5
TPM2-206ENST00000486018 TMX3Q96JJ7 454 aa18.17■□□□□ 0.5
TPM2-206ENST00000486018 AGBL1Q96MI9 1066 aa18.17■□□□□ 0.5
TPM2-206ENST00000486018 PORCNQ9H237 461 aa18.17■□□□□ 0.5
TPM2-206ENST00000486018 RIPK3Q9Y572 518 aa18.17■□□□□ 0.5
TPM2-206ENST00000486018 PTCH2Q9Y6C5 1203 aa18.17■□□□□ 0.5
TPM2-206ENST00000486018 MKI67P46013 3256 aaKnown RBP18.16■□□□□ 0.5
TPM2-206ENST00000486018 PRPF3O43395 683 aaKnown RBP18.16■□□□□ 0.5
TPM2-206ENST00000486018 DHX16O60231 1041 aaKnown RBP18.16■□□□□ 0.5
TPM2-206ENST00000486018 PKN1Q16512 942 aa18.16■□□□□ 0.5
TPM2-206ENST00000486018 CCDC82Q8N4S0 544 aa18.16■□□□□ 0.5
TPM2-206ENST00000486018 RNF26Q9BY78 433 aaPredicted RBP18.16■□□□□ 0.5
TPM2-206ENST00000486018 PNMA2Q9UL42 364 aa18.16■□□□□ 0.5
TPM2-206ENST00000486018 V9GY48 417 aaPredicted RBP18.16■□□□□ 0.5
TPM2-206ENST00000486018 SMCHD1A6NHR9 2005 aa18.15■□□□□ 0.5
TPM2-206ENST00000486018 BRCA2P51587 3418 aa18.15■□□□□ 0.5
TPM2-206ENST00000486018 SLC25A27O95847 323 aa18.15■□□□□ 0.5
TPM2-206ENST00000486018 MYCP01106 439 aaPredicted RBP18.15■□□□□ 0.5
TPM2-206ENST00000486018 CCNA1P78396 465 aa18.15■□□□□ 0.5
TPM2-206ENST00000486018 LACTBP83111 547 aaPredicted RBP18.15■□□□□ 0.5
TPM2-206ENST00000486018 TKFCQ3LXA3 575 aa18.15■□□□□ 0.5
TPM2-206ENST00000486018 SNRNP48Q6IEG0 339 aaKnown RBP18.15■□□□□ 0.5
TPM2-206ENST00000486018 CCDC174Q6PII3 467 aa18.15■□□□□ 0.5
TPM2-206ENST00000486018 CPXCR1Q8N123 301 aa18.15■□□□□ 0.5
TPM2-206ENST00000486018 NSUN7Q8NE18 718 aaKnown RBP18.15■□□□□ 0.5
TPM2-206ENST00000486018 PHKBQ93100 1093 aa18.15■□□□□ 0.5
TPM2-206ENST00000486018 RRP36Q96EU6 259 aaKnown RBP18.15■□□□□ 0.5
TPM2-206ENST00000486018 ZSWIM8A7E2V4 1837 aa18.14■□□□□ 0.5
TPM2-206ENST00000486018 FMNL1O95466 1100 aaPredicted RBP18.14■□□□□ 0.49
TPM2-206ENST00000486018 TAL1P17542 331 aaPredicted RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms