RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 LZTS1Q9Y250 596 aa5.46□□□□□ -1.54
RTN4-213ENST00000485749 DYTNA2CJ06 578 aa5.45□□□□□ -1.54
RTN4-213ENST00000485749 IQCA1LA6NCM1 817 aa5.45□□□□□ -1.54
RTN4-213ENST00000485749 ESRRAP11474 423 aaPredicted RBP5.45□□□□□ -1.54
RTN4-213ENST00000485749 STAT3P40763 770 aa5.45□□□□□ -1.54
RTN4-213ENST00000485749 GSTM4Q03013 218 aa5.45□□□□□ -1.54
RTN4-213ENST00000485749 ZNF252P-AS1Q0IIN9 211 aa5.45□□□□□ -1.54
RTN4-213ENST00000485749 RASIP1Q5U651 963 aa5.45□□□□□ -1.54
RTN4-213ENST00000485749 C6orf15Q6UXA7 325 aaPredicted RBP5.45□□□□□ -1.54
RTN4-213ENST00000485749 CBLL1Q75N03 491 aa5.45□□□□□ -1.54
RTN4-213ENST00000485749 VN1R5Q7Z5H4 357 aa5.45□□□□□ -1.54
RTN4-213ENST00000485749 ANKRD23Q86SG2 305 aa5.45□□□□□ -1.54
RTN4-213ENST00000485749 TTC6Q86TZ1 520 aa5.45□□□□□ -1.54
RTN4-213ENST00000485749 SULF2Q8IWU5 870 aa5.45□□□□□ -1.54
RTN4-213ENST00000485749 NIM1KQ8IY84 436 aa5.45□□□□□ -1.54
RTN4-213ENST00000485749 CHPFQ8IZ52 775 aa5.45□□□□□ -1.54
RTN4-213ENST00000485749 LRRC47Q8N1G4 583 aaKnown RBP5.45□□□□□ -1.54
RTN4-213ENST00000485749 POU5F2Q8N7G0 328 aa5.45□□□□□ -1.54
RTN4-213ENST00000485749 TEX19Q8NA77 164 aa5.45□□□□□ -1.54
RTN4-213ENST00000485749 ZBTB38Q8NAP3 1195 aaPredicted RBP5.45□□□□□ -1.54
RTN4-213ENST00000485749 FLCNQ8NFG4 579 aa5.45□□□□□ -1.54
RTN4-213ENST00000485749 FBLIM1Q8WUP2 373 aa5.45□□□□□ -1.54
RTN4-213ENST00000485749 GAL3ST3Q96A11 431 aa5.45□□□□□ -1.54
RTN4-213ENST00000485749 APBA2Q99767 749 aa5.45□□□□□ -1.54
RTN4-213ENST00000485749 SPATA9Q9BWV2 254 aa5.45□□□□□ -1.54
RTN4-213ENST00000485749 PFDN2Q9UHV9 154 aa5.45□□□□□ -1.54
RTN4-213ENST00000485749 CD2APQ9Y5K6 639 aa5.45□□□□□ -1.54
RTN4-213ENST00000485749 TACC3Q9Y6A5 838 aa5.45□□□□□ -1.54
RTN4-213ENST00000485749 EID1Q9Y6B2 187 aa5.45□□□□□ -1.54
RTN4-213ENST00000485749 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.44□□□□□ -1.54
RTN4-213ENST00000485749 TBX3O15119 743 aa5.44□□□□□ -1.54
RTN4-213ENST00000485749 MYL1P05976 194 aa5.44□□□□□ -1.54
RTN4-213ENST00000485749 SOX5P35711 763 aa5.44□□□□□ -1.54
RTN4-213ENST00000485749 GNALP38405 381 aa5.44□□□□□ -1.54
RTN4-213ENST00000485749 CASP2P42575 452 aa5.44□□□□□ -1.54
RTN4-213ENST00000485749 PCDH1Q08174 1060 aa5.44□□□□□ -1.54
RTN4-213ENST00000485749 MLECQ14165 292 aa5.44□□□□□ -1.54
RTN4-213ENST00000485749 CDC37Q16543 378 aaPredicted RBP5.44□□□□□ -1.54
RTN4-213ENST00000485749 FNDC3BQ53EP0 1204 aaKnown RBP5.44□□□□□ -1.54
RTN4-213ENST00000485749 SYCP2LQ5T4T6 812 aa5.44□□□□□ -1.54
RTN4-213ENST00000485749 OGFOD2Q6N063 350 aa5.44□□□□□ -1.54
RTN4-213ENST00000485749 HDGFL2Q7Z4V5 671 aaPredicted RBP5.44□□□□□ -1.54
RTN4-213ENST00000485749 THNSL2Q86YJ6 484 aa5.44□□□□□ -1.54
RTN4-213ENST00000485749 VPS37AQ8NEZ2 397 aa5.44□□□□□ -1.54
RTN4-213ENST00000485749 TMEM40Q8WWA1 233 aa5.44□□□□□ -1.54
RTN4-213ENST00000485749 RSPH1Q8WYR4 309 aa5.44□□□□□ -1.54
RTN4-213ENST00000485749 LRRC27Q9C0I9 530 aa5.44□□□□□ -1.54
RTN4-213ENST00000485749 PHAXQ9H814 394 aaKnown RBP5.44□□□□□ -1.54
RTN4-213ENST00000485749 RAD18Q9NS91 495 aa5.44□□□□□ -1.54
RTN4-213ENST00000485749 CACNA2D2Q9NY47 1150 aa5.44□□□□□ -1.54
RTN4-213ENST00000485749 MCM8Q9UJA3 840 aa5.44□□□□□ -1.54
RTN4-213ENST00000485749 POLR3KQ9Y2Y1 108 aaPredicted RBP5.44□□□□□ -1.54
RTN4-213ENST00000485749 POU3F3P20264 500 aaPredicted RBP5.43□□□□□ -1.54
RTN4-213ENST00000485749 CNGA1P29973 690 aa5.43□□□□□ -1.54
RTN4-213ENST00000485749 FLT3P36888 993 aa5.43□□□□□ -1.54
RTN4-213ENST00000485749 EPHB1P54762 984 aa5.43□□□□□ -1.54
RTN4-213ENST00000485749 ZNF423Q2M1K9 1284 aa5.43□□□□□ -1.54
RTN4-213ENST00000485749 CCDC184Q52MB2 194 aa5.43□□□□□ -1.54
RTN4-213ENST00000485749 BRDTQ58F21 947 aaPredicted RBP5.43□□□□□ -1.54
RTN4-213ENST00000485749 CDPF1Q6NVV7 123 aa5.43□□□□□ -1.54
RTN4-213ENST00000485749 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.43□□□□□ -1.54
RTN4-213ENST00000485749 ZNF513Q8N8E2 541 aaPredicted RBP5.43□□□□□ -1.54
RTN4-213ENST00000485749 C2CD4AQ8NCU7 369 aaPredicted RBP5.43□□□□□ -1.54
RTN4-213ENST00000485749 LSM14AQ8ND56 463 aaKnown RBP5.43□□□□□ -1.54
RTN4-213ENST00000485749 MISP3Q96FF7 219 aa5.43□□□□□ -1.54
RTN4-213ENST00000485749 MAPRE3Q9UPY8 281 aa5.43□□□□□ -1.54
RTN4-213ENST00000485749 A0A087X0B3 334 aa5.42□□□□□ -1.54
RTN4-213ENST00000485749 PABPN1LA6NDY0 278 aaKnown RBP5.42□□□□□ -1.54
RTN4-213ENST00000485749 UPK3BL1B0FP48 263 aa5.42□□□□□ -1.54
RTN4-213ENST00000485749 UPK3BL2E5RIL1 263 aa5.42□□□□□ -1.54
RTN4-213ENST00000485749 ADCY3O60266 1144 aa5.42□□□□□ -1.54
RTN4-213ENST00000485749 FAM153BP0C7A2 387 aa5.42□□□□□ -1.54
RTN4-213ENST00000485749 ADH5P11766 374 aa5.42□□□□□ -1.54
RTN4-213ENST00000485749 MYCLP1P12525 358 aaPredicted RBP5.42□□□□□ -1.54
RTN4-213ENST00000485749 ITGB5P18084 799 aa5.42□□□□□ -1.54
RTN4-213ENST00000485749 CDKN1CP49918 316 aaPredicted RBP5.42□□□□□ -1.54
RTN4-213ENST00000485749 AP3B2Q13367 1082 aa5.42□□□□□ -1.54
RTN4-213ENST00000485749 HLTFQ14527 1009 aaKnown RBP eCLIP5.42□□□□□ -1.54
RTN4-213ENST00000485749 CYP27C1Q4G0S4 372 aa5.42□□□□□ -1.54
RTN4-213ENST00000485749 MRM1Q6IN84 353 aaKnown RBP5.42□□□□□ -1.54
RTN4-213ENST00000485749 CCDC70Q6NSX1 233 aa5.42□□□□□ -1.54
RTN4-213ENST00000485749 LCA5Q86VQ0 697 aa5.42□□□□□ -1.54
RTN4-213ENST00000485749 DDX42Q86XP3 938 aaKnown RBP eCLIP5.42□□□□□ -1.54
RTN4-213ENST00000485749 JAMLQ86YT9 394 aa5.42□□□□□ -1.54
RTN4-213ENST00000485749 CHCHD4Q8N4Q1 142 aa5.42□□□□□ -1.54
RTN4-213ENST00000485749 CCDC47Q96A33 483 aaKnown RBP5.42□□□□□ -1.54
RTN4-213ENST00000485749 CFAP53Q96M91 514 aa5.42□□□□□ -1.54
RTN4-213ENST00000485749 KIF2CQ99661 725 aa5.42□□□□□ -1.54
RTN4-213ENST00000485749 AS3MTQ9HBK9 375 aa5.42□□□□□ -1.54
RTN4-213ENST00000485749 FBXO2Q9UK22 296 aaPredicted RBP5.42□□□□□ -1.54
RTN4-213ENST00000485749 SLC5A6Q9Y289 635 aa5.42□□□□□ -1.54
RTN4-213ENST00000485749 THRAP3Q9Y2W1 955 aaKnown RBP5.42□□□□□ -1.54
RTN4-213ENST00000485749 RABGAP1Q9Y3P9 1069 aa5.42□□□□□ -1.54
RTN4-213ENST00000485749 SNCAIPQ9Y6H5 919 aa5.42□□□□□ -1.54
RTN4-213ENST00000485749 SYNRGQ9UMZ2 1314 aa5.42□□□□□ -1.54
RTN4-213ENST00000485749 B2RBV5 119 aa5.41□□□□□ -1.54
RTN4-213ENST00000485749 GFRA2O00451 464 aa5.41□□□□□ -1.54
RTN4-213ENST00000485749 TNFRSF10CO14798 259 aa5.41□□□□□ -1.54
RTN4-213ENST00000485749 PLD2O14939 933 aa5.41□□□□□ -1.54
RTN4-213ENST00000485749 DRD2P14416 443 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms