RNA–Protein interactions for RNA: ENST00000485705.5

RPUSD3-217, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-217ENST00000485705 EFCC1Q9HA90 598 aa18.02■□□□□ 0.48
RPUSD3-217ENST00000485705 TPCN1Q9ULQ1 816 aa18.02■□□□□ 0.48
RPUSD3-217ENST00000485705 RIPK3Q9Y572 518 aa18.02■□□□□ 0.48
RPUSD3-217ENST00000485705 CTDP1Q9Y5B0 961 aaPredicted RBP18.02■□□□□ 0.48
RPUSD3-217ENST00000485705 FDX1P10109 184 aa18.01■□□□□ 0.47
RPUSD3-217ENST00000485705 STAT3P40763 770 aa18.01■□□□□ 0.47
RPUSD3-217ENST00000485705 METAP2P50579 478 aaKnown RBP eCLIP18.01■□□□□ 0.47
RPUSD3-217ENST00000485705 CCT2P78371 535 aaKnown RBP18.01■□□□□ 0.47
RPUSD3-217ENST00000485705 RABEP1Q15276 862 aa18.01■□□□□ 0.47
RPUSD3-217ENST00000485705 TMTC3Q6ZXV5 915 aa18.01■□□□□ 0.47
RPUSD3-217ENST00000485705 CCDC82Q8N4S0 544 aa18.01■□□□□ 0.47
RPUSD3-217ENST00000485705 PIBF1Q8WXW3 757 aa18.01■□□□□ 0.47
RPUSD3-217ENST00000485705 TRIM47Q96LD4 638 aa18.01■□□□□ 0.47
RPUSD3-217ENST00000485705 AGBL1Q96MI9 1066 aa18.01■□□□□ 0.47
RPUSD3-217ENST00000485705 ATP2A1O14983 1001 aa18■□□□□ 0.47
RPUSD3-217ENST00000485705 ERCC3P19447 782 aa18■□□□□ 0.47
RPUSD3-217ENST00000485705 ADD1P35611 737 aaKnown RBP18■□□□□ 0.47
RPUSD3-217ENST00000485705 PSMC4P43686 418 aa18■□□□□ 0.47
RPUSD3-217ENST00000485705 GNAQP50148 359 aa18■□□□□ 0.47
RPUSD3-217ENST00000485705 RCAN1P53805 252 aa18■□□□□ 0.47
RPUSD3-217ENST00000485705 STK3Q13188 491 aa18■□□□□ 0.47
RPUSD3-217ENST00000485705 CDC37Q16543 378 aaPredicted RBP18■□□□□ 0.47
RPUSD3-217ENST00000485705 SNRNP48Q6IEG0 339 aaKnown RBP18■□□□□ 0.47
RPUSD3-217ENST00000485705 RIOX2Q8IUF8 465 aa18■□□□□ 0.47
RPUSD3-217ENST00000485705 MTMR8Q96EF0 704 aa18■□□□□ 0.47
RPUSD3-217ENST00000485705 ZNF274Q96GC6 653 aaPredicted RBP18■□□□□ 0.47
RPUSD3-217ENST00000485705 ERO1AQ96HE7 468 aa18■□□□□ 0.47
RPUSD3-217ENST00000485705 TEX13BQ9BXU2 312 aa18■□□□□ 0.47
RPUSD3-217ENST00000485705 NCOA5Q9HCD5 579 aaKnown RBP18■□□□□ 0.47
RPUSD3-217ENST00000485705 PLXNB2O15031 1838 aa18■□□□□ 0.47
RPUSD3-217ENST00000485705 LARGE1O95461 756 aa17.99■□□□□ 0.47
RPUSD3-217ENST00000485705 FMNL1O95466 1100 aaPredicted RBP17.99■□□□□ 0.47
RPUSD3-217ENST00000485705 CCNA1P78396 465 aa17.99■□□□□ 0.47
RPUSD3-217ENST00000485705 FUT2Q10981 343 aa17.99■□□□□ 0.47
RPUSD3-217ENST00000485705 ANKRD1Q15327 319 aa17.99■□□□□ 0.47
RPUSD3-217ENST00000485705 QRICH1Q2TAL8 776 aa17.99■□□□□ 0.47
RPUSD3-217ENST00000485705 WDR78Q5VTH9 848 aa17.99■□□□□ 0.47
RPUSD3-217ENST00000485705 NCAPG2Q86XI2 1143 aa17.99■□□□□ 0.47
RPUSD3-217ENST00000485705 HOMER1Q86YM7 354 aa17.99■□□□□ 0.47
RPUSD3-217ENST00000485705 PIGSQ96S52 555 aa17.99■□□□□ 0.47
RPUSD3-217ENST00000485705 SPZ1Q9BXG8 430 aa17.99■□□□□ 0.47
RPUSD3-217ENST00000485705 RBM28Q9NW13 759 aaKnown RBP17.99■□□□□ 0.47
RPUSD3-217ENST00000485705 NID2Q14112 1375 aa17.99■□□□□ 0.47
RPUSD3-217ENST00000485705 hCG_1642624A0A1W2PR95 340 aa17.98■□□□□ 0.47
RPUSD3-217ENST00000485705 PPP1R11O60927 126 aaPredicted RBP17.98■□□□□ 0.47
RPUSD3-217ENST00000485705 SLC34A2O95436 690 aa17.98■□□□□ 0.47
RPUSD3-217ENST00000485705 ICAM1P05362 532 aa17.98■□□□□ 0.47
RPUSD3-217ENST00000485705 OAZ1P54368 228 aa17.98■□□□□ 0.47
RPUSD3-217ENST00000485705 FCGRTP55899 365 aa17.98■□□□□ 0.47
RPUSD3-217ENST00000485705 KIF22Q14807 665 aa17.98■□□□□ 0.47
RPUSD3-217ENST00000485705 ME3Q16798 604 aa17.98■□□□□ 0.47
RPUSD3-217ENST00000485705 COL13A1Q5TAT6 717 aaPredicted RBP17.98■□□□□ 0.47
RPUSD3-217ENST00000485705 GPR142Q7Z601 462 aa17.98■□□□□ 0.47
RPUSD3-217ENST00000485705 CCAR1Q8IX12 1150 aaKnown RBP17.98■□□□□ 0.47
RPUSD3-217ENST00000485705 LZTS2Q9BRK4 669 aa17.98■□□□□ 0.47
RPUSD3-217ENST00000485705 PRDM10Q9NQV6 1147 aa17.98■□□□□ 0.47
RPUSD3-217ENST00000485705 HOMER2Q9NSB8 354 aa17.98■□□□□ 0.47
RPUSD3-217ENST00000485705 CCPG1Q9ULG6 757 aa17.98■□□□□ 0.47
RPUSD3-217ENST00000485705 CNTNAP5Q8WYK1 1306 aa17.98■□□□□ 0.47
RPUSD3-217ENST00000485705 TNPO2O14787 897 aaKnown RBP17.97■□□□□ 0.47
RPUSD3-217ENST00000485705 PPFIA3O75145 1194 aa17.97■□□□□ 0.47
RPUSD3-217ENST00000485705 CD2BP2O95400 341 aaKnown RBP17.97■□□□□ 0.47
RPUSD3-217ENST00000485705 ALAS1P13196 640 aa17.97■□□□□ 0.47
RPUSD3-217ENST00000485705 SMARCA1P28370 1054 aa17.97■□□□□ 0.47
RPUSD3-217ENST00000485705 MAPK4P31152 587 aa17.97■□□□□ 0.47
RPUSD3-217ENST00000485705 SCRN1Q12765 414 aa17.97■□□□□ 0.47
RPUSD3-217ENST00000485705 SHCBP1Q8NEM2 672 aa17.97■□□□□ 0.47
RPUSD3-217ENST00000485705 TRIM17Q9Y577 477 aa17.97■□□□□ 0.47
RPUSD3-217ENST00000485705 ZBTB5O15062 677 aa17.96■□□□□ 0.47
RPUSD3-217ENST00000485705 PFKFB2O60825 505 aa17.96■□□□□ 0.47
RPUSD3-217ENST00000485705 DTNBO60941 627 aa17.96■□□□□ 0.47
RPUSD3-217ENST00000485705 SLC25A27O95847 323 aa17.96■□□□□ 0.47
RPUSD3-217ENST00000485705 NTRK3Q16288 839 aa17.96■□□□□ 0.47
RPUSD3-217ENST00000485705 USH1GQ495M9 461 aa17.96■□□□□ 0.47
RPUSD3-217ENST00000485705 MUM1L1Q5H9M0 696 aa17.96■□□□□ 0.47
RPUSD3-217ENST00000485705 OTOP1Q7RTM1 612 aa17.96■□□□□ 0.47
RPUSD3-217ENST00000485705 PLEKHH3Q7Z736 793 aa17.96■□□□□ 0.47
RPUSD3-217ENST00000485705 NECAB1Q8N987 351 aa17.96■□□□□ 0.47
RPUSD3-217ENST00000485705 SLKQ9H2G2 1235 aaPredicted RBP17.96■□□□□ 0.47
RPUSD3-217ENST00000485705 MROH8Q9H579 483 aa17.96■□□□□ 0.47
RPUSD3-217ENST00000485705 RNF146Q9NTX7 359 aa17.96■□□□□ 0.47
RPUSD3-217ENST00000485705 GABRQQ9UN88 632 aa17.96■□□□□ 0.47
RPUSD3-217ENST00000485705 PNMA6FA0A0J9YX94 578 aa17.95■□□□□ 0.46
RPUSD3-217ENST00000485705 CCDC196A0A1B0GTZ2 297 aa17.95■□□□□ 0.46
RPUSD3-217ENST00000485705 PTPREP23469 700 aa17.95■□□□□ 0.46
RPUSD3-217ENST00000485705 PPP2R5BQ15173 497 aa17.95■□□□□ 0.46
RPUSD3-217ENST00000485705 FBXO11Q86XK2 927 aa17.95■□□□□ 0.46
RPUSD3-217ENST00000485705 RRP36Q96EU6 259 aaKnown RBP17.95■□□□□ 0.46
RPUSD3-217ENST00000485705 TRERF1Q96PN7 1200 aa17.95■□□□□ 0.46
RPUSD3-217ENST00000485705 CWC22Q9HCG8 908 aaKnown RBP17.95■□□□□ 0.46
RPUSD3-217ENST00000485705 GJD2Q9UKL4 321 aa17.95■□□□□ 0.46
RPUSD3-217ENST00000485705 LIMCH1Q9UPQ0 1083 aa17.95■□□□□ 0.46
RPUSD3-217ENST00000485705 HTTP42858 3142 aa17.94■□□□□ 0.46
RPUSD3-217ENST00000485705 PRKCZQ05513 592 aa17.94■□□□□ 0.46
RPUSD3-217ENST00000485705 ST3GAL1Q11201 340 aa17.94■□□□□ 0.46
RPUSD3-217ENST00000485705 CLEC4DQ8WXI8 215 aa17.94■□□□□ 0.46
RPUSD3-217ENST00000485705 PHKBQ93100 1093 aa17.94■□□□□ 0.46
RPUSD3-217ENST00000485705 COA7Q96BR5 231 aa17.94■□□□□ 0.46
RPUSD3-217ENST00000485705 SRRDQ9UH36 339 aa17.94■□□□□ 0.46
RPUSD3-217ENST00000485705 V9GY48 417 aaPredicted RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms