RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 KCNA10Q16322 511 aa22.83■■□□□ 1.25
COL27A1-205ENST00000485397 VPS53Q5VIR6 699 aa22.83■■□□□ 1.25
COL27A1-205ENST00000485397 CCSAPQ6IQ19 270 aaPredicted RBP22.83■■□□□ 1.25
COL27A1-205ENST00000485397 ARMCX2Q7L311 632 aa22.83■■□□□ 1.25
COL27A1-205ENST00000485397 STAG1Q8WVM7 1258 aa22.83■■□□□ 1.25
COL27A1-205ENST00000485397 GMCL1Q96IK5 515 aa22.83■■□□□ 1.25
COL27A1-205ENST00000485397 AGBL1Q96MI9 1066 aa22.83■■□□□ 1.25
COL27A1-205ENST00000485397 STARD7Q9NQZ5 370 aa22.83■■□□□ 1.25
COL27A1-205ENST00000485397 IL17RBQ9NRM6 502 aa22.83■■□□□ 1.25
COL27A1-205ENST00000485397 STX8Q9UNK0 236 aa22.83■■□□□ 1.25
COL27A1-205ENST00000485397 ZNF536O15090 1300 aa22.82■■□□□ 1.24
COL27A1-205ENST00000485397 TSPY2A6NKD2 308 aa22.82■■□□□ 1.24
COL27A1-205ENST00000485397 KIAA0355O15063 1070 aa22.82■■□□□ 1.24
COL27A1-205ENST00000485397 DUSP11O75319 330 aaKnown RBP22.82■■□□□ 1.24
COL27A1-205ENST00000485397 FDX1P10109 184 aa22.82■■□□□ 1.24
COL27A1-205ENST00000485397 CNTN2Q02246 1040 aa22.82■■□□□ 1.24
COL27A1-205ENST00000485397 IKQ13123 557 aaPredicted RBP22.82■■□□□ 1.24
COL27A1-205ENST00000485397 KCTD1Q719H9 257 aa22.82■■□□□ 1.24
COL27A1-205ENST00000485397 RASGRP2Q7LDG7 609 aa22.82■■□□□ 1.24
COL27A1-205ENST00000485397 FAM160B2Q86V87 743 aa22.82■■□□□ 1.24
COL27A1-205ENST00000485397 CHURC1Q8WUH1 139 aa22.82■■□□□ 1.24
COL27A1-205ENST00000485397 ABHD16BQ9H3Z7 469 aa22.82■■□□□ 1.24
COL27A1-205ENST00000485397 ZBTB47Q9UFB7 747 aaPredicted RBP22.82■■□□□ 1.24
COL27A1-205ENST00000485397 MOXD2PA6NHM9 499 aa22.81■■□□□ 1.24
COL27A1-205ENST00000485397 EPHB4P54760 987 aa22.81■■□□□ 1.24
COL27A1-205ENST00000485397 SNAP25P60880 206 aa22.81■■□□□ 1.24
COL27A1-205ENST00000485397 CCDC144BQ3MJ40 725 aa22.81■■□□□ 1.24
COL27A1-205ENST00000485397 CCDC144CPQ8IYA2 1237 aa22.81■■□□□ 1.24
COL27A1-205ENST00000485397 EVI5LQ96CN4 794 aa22.81■■□□□ 1.24
COL27A1-205ENST00000485397 ACAD9Q9H845 621 aa22.81■■□□□ 1.24
COL27A1-205ENST00000485397 RNF146Q9NTX7 359 aa22.81■■□□□ 1.24
COL27A1-205ENST00000485397 TMEM39AQ9NV64 488 aa22.81■■□□□ 1.24
COL27A1-205ENST00000485397 COL6A3P12111 3177 aa22.81■■□□□ 1.24
COL27A1-205ENST00000485397 C6orf222P0C671 652 aaPredicted RBP22.8■■□□□ 1.24
COL27A1-205ENST00000485397 RAG1P15918 1043 aa22.8■■□□□ 1.24
COL27A1-205ENST00000485397 FAAP100Q0VG06 881 aa22.8■■□□□ 1.24
COL27A1-205ENST00000485397 ZNF697Q5TEC3 545 aa22.8■■□□□ 1.24
COL27A1-205ENST00000485397 FAM133AQ8N9E0 248 aa22.8■■□□□ 1.24
COL27A1-205ENST00000485397 NUP133Q8WUM0 1156 aa22.8■■□□□ 1.24
COL27A1-205ENST00000485397 KATNBL1Q9H079 304 aa22.8■■□□□ 1.24
COL27A1-205ENST00000485397 A1CFQ9NQ94 594 aaKnown RBP22.8■■□□□ 1.24
COL27A1-205ENST00000485397 MTMR7Q9Y216 660 aa22.8■■□□□ 1.24
COL27A1-205ENST00000485397 RANBP6O60518 1105 aaKnown RBP22.79■■□□□ 1.24
COL27A1-205ENST00000485397 CST5P28325 142 aaPredicted RBP22.79■■□□□ 1.24
COL27A1-205ENST00000485397 PDE1AP54750 535 aa22.79■■□□□ 1.24
COL27A1-205ENST00000485397 PPP4R3BQ5MIZ7 849 aa22.79■■□□□ 1.24
COL27A1-205ENST00000485397 RCSD1Q6JBY9 416 aa22.79■■□□□ 1.24
COL27A1-205ENST00000485397 CCDC174Q6PII3 467 aa22.79■■□□□ 1.24
COL27A1-205ENST00000485397 ANKRD33Q7Z3H0 272 aa22.79■■□□□ 1.24
COL27A1-205ENST00000485397 TOX2Q96NM4 488 aa22.79■■□□□ 1.24
COL27A1-205ENST00000485397 TRERF1Q96PN7 1200 aa22.79■■□□□ 1.24
COL27A1-205ENST00000485397 ANAPC4Q9UJX5 808 aa22.79■■□□□ 1.24
COL27A1-205ENST00000485397 MCM3APO60318 1980 aa22.79■■□□□ 1.24
COL27A1-205ENST00000485397 SOWAHBA6NEL2 793 aa22.78■■□□□ 1.24
COL27A1-205ENST00000485397 DCDC2CA8MYV0 355 aa22.78■■□□□ 1.24
COL27A1-205ENST00000485397 PLA2G6O60733 806 aa22.78■■□□□ 1.24
COL27A1-205ENST00000485397 ALAS1P13196 640 aa22.78■■□□□ 1.24
COL27A1-205ENST00000485397 GJA9P57773 515 aa22.78■■□□□ 1.24
COL27A1-205ENST00000485397 GLT1D1Q96MS3 346 aa22.78■■□□□ 1.24
COL27A1-205ENST00000485397 UPF3AQ9H1J1 476 aaKnown RBP22.78■■□□□ 1.24
COL27A1-205ENST00000485397 HELLSQ9NRZ9 838 aa22.78■■□□□ 1.24
COL27A1-205ENST00000485397 PRR12Q9ULL5 1215 aa22.78■■□□□ 1.24
COL27A1-205ENST00000485397 ASGR1P07306 291 aa22.77■■□□□ 1.24
COL27A1-205ENST00000485397 TKFCQ3LXA3 575 aa22.77■■□□□ 1.24
COL27A1-205ENST00000485397 PCSK9Q8NBP7 692 aaKnown RBP22.77■■□□□ 1.24
COL27A1-205ENST00000485397 FAM227BQ96M60 508 aa22.77■■□□□ 1.24
COL27A1-205ENST00000485397 SEMA6BQ9H3T3 888 aa22.77■■□□□ 1.24
COL27A1-205ENST00000485397 SPC25Q9HBM1 224 aa22.77■■□□□ 1.24
COL27A1-205ENST00000485397 DDX49Q9Y6V7 483 aaKnown RBP22.77■■□□□ 1.24
COL27A1-205ENST00000485397 A0A0D9SFI3 127 aa22.76■■□□□ 1.23
COL27A1-205ENST00000485397 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.76■■□□□ 1.23
COL27A1-205ENST00000485397 CTAGE5O15320 804 aa22.76■■□□□ 1.23
COL27A1-205ENST00000485397 ORC4O43929 436 aa22.76■■□□□ 1.23
COL27A1-205ENST00000485397 NOVP48745 357 aa22.76■■□□□ 1.23
COL27A1-205ENST00000485397 SMAD3P84022 425 aaKnown RBP22.76■■□□□ 1.23
COL27A1-205ENST00000485397 FPGSQ05932 587 aa22.76■■□□□ 1.23
COL27A1-205ENST00000485397 HDAC1Q13547 482 aaPredicted RBP22.76■■□□□ 1.23
COL27A1-205ENST00000485397 ALX1Q15699 326 aa22.76■■□□□ 1.23
COL27A1-205ENST00000485397 MUM1L1Q5H9M0 696 aa22.76■■□□□ 1.23
COL27A1-205ENST00000485397 GNASQ5JWF2 1037 aa22.76■■□□□ 1.23
COL27A1-205ENST00000485397 VTI1AQ96AJ9 217 aa22.76■■□□□ 1.23
COL27A1-205ENST00000485397 RNPC3Q96LT9 517 aaKnown RBP22.76■■□□□ 1.23
COL27A1-205ENST00000485397 ELP1O95163 1332 aa22.76■■□□□ 1.23
COL27A1-205ENST00000485397 FGAP02671 866 aa22.75■■□□□ 1.23
COL27A1-205ENST00000485397 FGRP09769 529 aa22.75■■□□□ 1.23
COL27A1-205ENST00000485397 CDK7P50613 346 aa22.75■■□□□ 1.23
COL27A1-205ENST00000485397 BEX3Q00994 111 aa22.75■■□□□ 1.23
COL27A1-205ENST00000485397 CCDC96Q2M329 555 aa22.75■■□□□ 1.23
COL27A1-205ENST00000485397 TTBK2Q6IQ55 1244 aa22.75■■□□□ 1.23
COL27A1-205ENST00000485397 CDX2Q99626 313 aaPredicted RBP22.75■■□□□ 1.23
COL27A1-205ENST00000485397 TOMM22Q9NS69 142 aa22.75■■□□□ 1.23
COL27A1-205ENST00000485397 TBX21Q9UL17 535 aa22.75■■□□□ 1.23
COL27A1-205ENST00000485397 ASTN1O14525 1302 aa22.75■■□□□ 1.23
COL27A1-205ENST00000485397 ASB14A6NK59 587 aa22.74■■□□□ 1.23
COL27A1-205ENST00000485397 PTGS1P23219 599 aa22.74■■□□□ 1.23
COL27A1-205ENST00000485397 TNFAIP2Q03169 654 aa22.74■■□□□ 1.23
COL27A1-205ENST00000485397 MCMDC2Q4G0Z9 681 aa22.74■■□□□ 1.23
COL27A1-205ENST00000485397 RRP12Q5JTH9 1297 aaKnown RBP22.74■■□□□ 1.23
COL27A1-205ENST00000485397 NOL8Q76FK4 1167 aaKnown RBP22.74■■□□□ 1.23
COL27A1-205ENST00000485397 TTYH1Q9H313 450 aaPredicted RBP22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 383.8 ms