RNA–Protein interactions for RNA: ENST00000485158.1

NUP188-206, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 392 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-206ENST00000485158 RAD21O60216 631 aa16.4■□□□□ 0.22
NUP188-206ENST00000485158 C6orf222P0C671 652 aaPredicted RBP16.4■□□□□ 0.22
NUP188-206ENST00000485158 FDX1P10109 184 aa16.4■□□□□ 0.22
NUP188-206ENST00000485158 CSF2RAP15509 400 aa16.4■□□□□ 0.22
NUP188-206ENST00000485158 IRX5P78411 483 aaPredicted RBP16.4■□□□□ 0.22
NUP188-206ENST00000485158 PSRC1Q6PGN9 363 aaPredicted RBP16.4■□□□□ 0.22
NUP188-206ENST00000485158 ARMCX2Q7L311 632 aa16.4■□□□□ 0.22
NUP188-206ENST00000485158 ATXN2LQ8WWM7 1075 aaKnown RBP16.4■□□□□ 0.22
NUP188-206ENST00000485158 CHMP4BQ9H444 224 aaKnown RBP16.4■□□□□ 0.22
NUP188-206ENST00000485158 MTMR4Q9NYA4 1195 aa16.4■□□□□ 0.22
NUP188-206ENST00000485158 TNFRSF10AO00220 468 aa16.39■□□□□ 0.21
NUP188-206ENST00000485158 GNASQ5JWF2 1037 aa16.39■□□□□ 0.21
NUP188-206ENST00000485158 CPXCR1Q8N123 301 aa16.39■□□□□ 0.21
NUP188-206ENST00000485158 ANKRD35Q8N283 1001 aa16.39■□□□□ 0.21
NUP188-206ENST00000485158 FAM133AQ8N9E0 248 aa16.39■□□□□ 0.21
NUP188-206ENST00000485158 HERVK_113Q902F9 699 aa16.39■□□□□ 0.21
NUP188-206ENST00000485158 SEZ6LQ9BYH1 1024 aa16.39■□□□□ 0.21
NUP188-206ENST00000485158 MKNK2Q9HBH9 465 aa16.39■□□□□ 0.21
NUP188-206ENST00000485158 RAVER2Q9HCJ3 691 aaKnown RBP16.39■□□□□ 0.21
NUP188-206ENST00000485158 CLIP2Q9UDT6 1046 aa16.39■□□□□ 0.21
NUP188-206ENST00000485158 PLIN4Q96Q06 1357 aa16.38■□□□□ 0.21
NUP188-206ENST00000485158 MCM3APO60318 1980 aa16.38■□□□□ 0.21
NUP188-206ENST00000485158 PBX2P40425 430 aa16.38■□□□□ 0.21
NUP188-206ENST00000485158 ZNF365Q70YC5 407 aa16.38■□□□□ 0.21
NUP188-206ENST00000485158 CCDC144CPQ8IYA2 1237 aa16.38■□□□□ 0.21
NUP188-206ENST00000485158 KBTBD3Q8NAB2 608 aa16.38■□□□□ 0.21
NUP188-206ENST00000485158 APPBP2Q92624 585 aa16.38■□□□□ 0.21
NUP188-206ENST00000485158 OSBP2Q969R2 916 aa16.38■□□□□ 0.21
NUP188-206ENST00000485158 KIFC2Q96AC6 838 aa16.38■□□□□ 0.21
NUP188-206ENST00000485158 CEP95Q96GE4 821 aa16.38■□□□□ 0.21
NUP188-206ENST00000485158 GAS2L1Q99501 681 aaPredicted RBP16.38■□□□□ 0.21
NUP188-206ENST00000485158 LRRCC1Q9C099 1032 aa16.38■□□□□ 0.21
NUP188-206ENST00000485158 ZNF287Q9HBT7 754 aa16.38■□□□□ 0.21
NUP188-206ENST00000485158 GNEQ9Y223 722 aaKnown RBP16.38■□□□□ 0.21
NUP188-206ENST00000485158 COG6Q9Y2V7 657 aa16.38■□□□□ 0.21
NUP188-206ENST00000485158 MYH4Q9Y623 1939 aa16.37■□□□□ 0.21
NUP188-206ENST00000485158 TRANK1O15050 2925 aa16.37■□□□□ 0.21
NUP188-206ENST00000485158 TLR3O15455 904 aaKnown RBP16.37■□□□□ 0.21
NUP188-206ENST00000485158 CABYRO75952 493 aa16.37■□□□□ 0.21
NUP188-206ENST00000485158 TTLL1O95922 423 aa16.37■□□□□ 0.21
NUP188-206ENST00000485158 GNAT2P19087 354 aa16.37■□□□□ 0.21
NUP188-206ENST00000485158 CCDC129Q6ZRS4 1044 aa16.37■□□□□ 0.21
NUP188-206ENST00000485158 EPB41L4AQ9HCS5 686 aaPredicted RBP16.37■□□□□ 0.21
NUP188-206ENST00000485158 IL23AQ9NPF7 189 aa16.37■□□□□ 0.21
NUP188-206ENST00000485158 ECHDC1Q9NTX5 307 aa16.37■□□□□ 0.21
NUP188-206ENST00000485158 ASTN1O14525 1302 aa16.37■□□□□ 0.21
NUP188-206ENST00000485158 MYO9BQ13459 2157 aa16.37■□□□□ 0.21
NUP188-206ENST00000485158 GRXCR1A8MXD5 290 aa16.36■□□□□ 0.21
NUP188-206ENST00000485158 ZFYP08048 801 aaPredicted RBP16.36■□□□□ 0.21
NUP188-206ENST00000485158 RAB30Q15771 203 aa16.36■□□□□ 0.21
NUP188-206ENST00000485158 ZNF444Q8N0Y2 327 aaPredicted RBP16.36■□□□□ 0.21
NUP188-206ENST00000485158 ASB2Q96Q27 587 aa16.36■□□□□ 0.21
NUP188-206ENST00000485158 ACAD9Q9H845 621 aa16.36■□□□□ 0.21
NUP188-206ENST00000485158 ZNF536O15090 1300 aa16.36■□□□□ 0.21
NUP188-206ENST00000485158 MINDY4BA8MYZ0 360 aa16.35■□□□□ 0.21
NUP188-206ENST00000485158 RNF113AO15541 343 aaKnown RBP16.35■□□□□ 0.21
NUP188-206ENST00000485158 PLA2G6O60733 806 aa16.35■□□□□ 0.21
NUP188-206ENST00000485158 ACRP10323 421 aa16.35■□□□□ 0.21
NUP188-206ENST00000485158 CNTN2Q02246 1040 aa16.35■□□□□ 0.21
NUP188-206ENST00000485158 TNFAIP2Q03169 654 aa16.35■□□□□ 0.21
NUP188-206ENST00000485158 ADGRE1Q14246 886 aa16.35■□□□□ 0.21
NUP188-206ENST00000485158 NEDD1Q8NHV4 660 aa16.35■□□□□ 0.21
NUP188-206ENST00000485158 VTI1AQ96AJ9 217 aa16.35■□□□□ 0.21
NUP188-206ENST00000485158 GMCL1Q96IK5 515 aa16.35■□□□□ 0.21
NUP188-206ENST00000485158 PRDM12Q9H4Q4 367 aa16.35■□□□□ 0.21
NUP188-206ENST00000485158 A1CFQ9NQ94 594 aaKnown RBP16.35■□□□□ 0.21
NUP188-206ENST00000485158 CXXC1Q9P0U4 656 aaPredicted RBP16.35■□□□□ 0.21
NUP188-206ENST00000485158 THEGQ9P2T0 379 aa16.35■□□□□ 0.21
NUP188-206ENST00000485158 Q9Y3F1 56 aa16.35■□□□□ 0.21
NUP188-206ENST00000485158 CTDP1Q9Y5B0 961 aaPredicted RBP16.35■□□□□ 0.21
NUP188-206ENST00000485158 GRIN2DO15399 1336 aa16.35■□□□□ 0.21
NUP188-206ENST00000485158 XIRP2A4UGR9 3374 aa16.35■□□□□ 0.21
NUP188-206ENST00000485158 REV3LO60673 3130 aa16.34■□□□□ 0.21
NUP188-206ENST00000485158 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.34■□□□□ 0.21
NUP188-206ENST00000485158 SOWAHBA6NEL2 793 aa16.34■□□□□ 0.21
NUP188-206ENST00000485158 ASB14A6NK59 587 aa16.34■□□□□ 0.21
NUP188-206ENST00000485158 PATL2C9JE40 543 aaKnown RBP16.34■□□□□ 0.21
NUP188-206ENST00000485158 GPAA1O43292 621 aa16.34■□□□□ 0.21
NUP188-206ENST00000485158 BMP3P12645 472 aa16.34■□□□□ 0.21
NUP188-206ENST00000485158 CYP2C18P33260 490 aa16.34■□□□□ 0.21
NUP188-206ENST00000485158 STAT2P52630 851 aa16.34■□□□□ 0.21
NUP188-206ENST00000485158 TKFCQ3LXA3 575 aa16.34■□□□□ 0.21
NUP188-206ENST00000485158 PPP1R12CQ9BZL4 782 aa16.34■□□□□ 0.21
NUP188-206ENST00000485158 BCL11AQ9H165 835 aa16.34■□□□□ 0.21
NUP188-206ENST00000485158 MTIF3Q9H2K0 278 aaKnown RBP16.34■□□□□ 0.21
NUP188-206ENST00000485158 MSRAQ9UJ68 235 aa16.34■□□□□ 0.21
NUP188-206ENST00000485158 FGBP02675 491 aa16.33■□□□□ 0.2
NUP188-206ENST00000485158 SLC4A3P48751 1232 aa16.33■□□□□ 0.2
NUP188-206ENST00000485158 BEX3Q00994 111 aa16.33■□□□□ 0.2
NUP188-206ENST00000485158 ITGA7Q13683 1181 aa16.33■□□□□ 0.2
NUP188-206ENST00000485158 FSCN1Q16658 493 aaKnown RBP16.33■□□□□ 0.2
NUP188-206ENST00000485158 SLFN13Q68D06 897 aa16.33■□□□□ 0.2
NUP188-206ENST00000485158 CXCL17Q6UXB2 119 aa16.33■□□□□ 0.2
NUP188-206ENST00000485158 FAM160B2Q86V87 743 aa16.33■□□□□ 0.2
NUP188-206ENST00000485158 MORC4Q8TE76 937 aa16.33■□□□□ 0.2
NUP188-206ENST00000485158 CHURC1Q8WUH1 139 aa16.33■□□□□ 0.2
NUP188-206ENST00000485158 VWCEQ96DN2 955 aa16.33■□□□□ 0.2
NUP188-206ENST00000485158 NOC4LQ9BVI4 516 aaKnown RBP16.33■□□□□ 0.2
NUP188-206ENST00000485158 HIPK3Q9H422 1215 aa16.33■□□□□ 0.2
NUP188-206ENST00000485158 LRRC37A2A6NM11 1700 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms