RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 FOSL2P15408 326 aa15.53■□□□□ 0.08
HDAC6-227ENST00000485102 CCDC144BQ3MJ40 725 aa15.53■□□□□ 0.08
HDAC6-227ENST00000485102 CCDC174Q6PII3 467 aa15.53■□□□□ 0.08
HDAC6-227ENST00000485102 ANKRD35Q8N283 1001 aa15.53■□□□□ 0.08
HDAC6-227ENST00000485102 NEDD1Q8NHV4 660 aa15.53■□□□□ 0.08
HDAC6-227ENST00000485102 EPB41L4AQ9HCS5 686 aaPredicted RBP15.53■□□□□ 0.08
HDAC6-227ENST00000485102 RCAN3Q9UKA8 241 aa15.53■□□□□ 0.08
HDAC6-227ENST00000485102 ZHX1Q9UKY1 873 aaPredicted RBP15.53■□□□□ 0.08
HDAC6-227ENST00000485102 MUC3AQ02505 3323 aa15.52■□□□□ 0.08
HDAC6-227ENST00000485102 A0A0U1RQG5 324 aaPredicted RBP15.52■□□□□ 0.08
HDAC6-227ENST00000485102 MYADML2A6NDP7 307 aa15.52■□□□□ 0.08
HDAC6-227ENST00000485102 ARVCFO00192 962 aa15.52■□□□□ 0.08
HDAC6-227ENST00000485102 CTAGE5O15320 804 aa15.52■□□□□ 0.08
HDAC6-227ENST00000485102 ADCY6O43306 1168 aa15.52■□□□□ 0.08
HDAC6-227ENST00000485102 SMARCA5O60264 1052 aaPredicted RBP15.52■□□□□ 0.08
HDAC6-227ENST00000485102 PLA2G6O60733 806 aa15.52■□□□□ 0.08
HDAC6-227ENST00000485102 C6orf222P0C671 652 aaPredicted RBP15.52■□□□□ 0.08
HDAC6-227ENST00000485102 DNAJB2P25686 324 aa15.52■□□□□ 0.08
HDAC6-227ENST00000485102 PPIGQ13427 754 aaKnown RBP eCLIP15.52■□□□□ 0.084e-7■■■□□ 15.8
HDAC6-227ENST00000485102 LRRFIP1Q32MZ4 808 aaKnown RBP15.52■□□□□ 0.08
HDAC6-227ENST00000485102 C16orf59Q7L2K0 433 aa15.52■□□□□ 0.08
HDAC6-227ENST00000485102 ARMCX2Q7L311 632 aa15.52■□□□□ 0.08
HDAC6-227ENST00000485102 FAM133AQ8N9E0 248 aa15.52■□□□□ 0.08
HDAC6-227ENST00000485102 SYMPKQ92797 1274 aaKnown RBP15.52■□□□□ 0.08
HDAC6-227ENST00000485102 KIFC2Q96AC6 838 aa15.52■□□□□ 0.08
HDAC6-227ENST00000485102 GPATCH3Q96I76 525 aa15.52■□□□□ 0.08
HDAC6-227ENST00000485102 RAVER2Q9HCJ3 691 aaKnown RBP15.52■□□□□ 0.08
HDAC6-227ENST00000485102 CTDP1Q9Y5B0 961 aaPredicted RBP15.52■□□□□ 0.08
HDAC6-227ENST00000485102 BMP3P12645 472 aa15.51■□□□□ 0.07
HDAC6-227ENST00000485102 GRIN2CQ14957 1233 aa15.51■□□□□ 0.07
HDAC6-227ENST00000485102 GNASQ5JWF2 1037 aa15.51■□□□□ 0.07
HDAC6-227ENST00000485102 TMEM240Q5SV17 173 aa15.51■□□□□ 0.07
HDAC6-227ENST00000485102 IFNL3Q8IZI9 196 aa15.51■□□□□ 0.07
HDAC6-227ENST00000485102 SLC43A3Q8NBI5 491 aa15.51■□□□□ 0.07
HDAC6-227ENST00000485102 GMCL1Q96IK5 515 aa15.51■□□□□ 0.07
HDAC6-227ENST00000485102 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.51■□□□□ 0.071e-7■■■□□ 17.8
HDAC6-227ENST00000485102 SEZ6LQ9BYH1 1024 aa15.51■□□□□ 0.07
HDAC6-227ENST00000485102 ZNF576Q9H609 170 aa15.51■□□□□ 0.07
HDAC6-227ENST00000485102 CABYRO75952 493 aa15.5■□□□□ 0.07
HDAC6-227ENST00000485102 CD4P01730 458 aa15.5■□□□□ 0.07
HDAC6-227ENST00000485102 TDO2P48775 406 aa15.5■□□□□ 0.07
HDAC6-227ENST00000485102 PDE4BQ07343 736 aa15.5■□□□□ 0.07
HDAC6-227ENST00000485102 TKFCQ3LXA3 575 aa15.5■□□□□ 0.07
HDAC6-227ENST00000485102 PPP4R3BQ5MIZ7 849 aa15.5■□□□□ 0.07
HDAC6-227ENST00000485102 SLFN13Q68D06 897 aa15.5■□□□□ 0.07
HDAC6-227ENST00000485102 FAM160B2Q86V87 743 aa15.5■□□□□ 0.07
HDAC6-227ENST00000485102 FAM126BQ8IXS8 530 aa15.5■□□□□ 0.07
HDAC6-227ENST00000485102 CCDC144CPQ8IYA2 1237 aa15.5■□□□□ 0.07
HDAC6-227ENST00000485102 TMEM199Q8N511 208 aa15.5■□□□□ 0.07
HDAC6-227ENST00000485102 CHURC1Q8WUH1 139 aa15.5■□□□□ 0.07
HDAC6-227ENST00000485102 NACAP1Q9BZK3 213 aa15.5■□□□□ 0.07
HDAC6-227ENST00000485102 PRDM1O75626 825 aa15.49■□□□□ 0.07
HDAC6-227ENST00000485102 STAT2P52630 851 aa15.49■□□□□ 0.07
HDAC6-227ENST00000485102 IRX5P78411 483 aaPredicted RBP15.49■□□□□ 0.07
HDAC6-227ENST00000485102 PSRC1Q6PGN9 363 aaPredicted RBP15.49■□□□□ 0.07
HDAC6-227ENST00000485102 CCDC129Q6ZRS4 1044 aa15.49■□□□□ 0.07
HDAC6-227ENST00000485102 STK11IPQ8N1F8 1099 aa15.49■□□□□ 0.07
HDAC6-227ENST00000485102 STAG1Q8WVM7 1258 aa15.49■□□□□ 0.07
HDAC6-227ENST00000485102 TIFAQ96CG3 184 aa15.49■□□□□ 0.07
HDAC6-227ENST00000485102 ACAD9Q9H845 621 aa15.49■□□□□ 0.07
HDAC6-227ENST00000485102 GNEQ9Y223 722 aaKnown RBP15.49■□□□□ 0.07
HDAC6-227ENST00000485102 ZNF536O15090 1300 aa15.48■□□□□ 0.07
HDAC6-227ENST00000485102 TTC41PQ6P2S7 1318 aa15.48■□□□□ 0.07
HDAC6-227ENST00000485102 ASB14A6NK59 587 aa15.48■□□□□ 0.07
HDAC6-227ENST00000485102 TMEM232C9JQI7 657 aa15.48■□□□□ 0.07
HDAC6-227ENST00000485102 M0R2C6 588 aa15.48■□□□□ 0.07
HDAC6-227ENST00000485102 TLR3O15455 904 aaKnown RBP15.48■□□□□ 0.07
HDAC6-227ENST00000485102 APPP05067 770 aa15.48■□□□□ 0.07
HDAC6-227ENST00000485102 SLC3A2P08195 630 aaKnown RBP15.48■□□□□ 0.07
HDAC6-227ENST00000485102 TSPY3P0CV98 308 aa15.48■□□□□ 0.07
HDAC6-227ENST00000485102 TSPY8P0CW00 308 aa15.48■□□□□ 0.07
HDAC6-227ENST00000485102 CNTN2Q02246 1040 aa15.48■□□□□ 0.07
HDAC6-227ENST00000485102 C20orf194Q5TEA3 1177 aa15.48■□□□□ 0.07
HDAC6-227ENST00000485102 LRRC47Q8N1G4 583 aaKnown RBP15.48■□□□□ 0.07
HDAC6-227ENST00000485102 A1CFQ9NQ94 594 aaKnown RBP15.48■□□□□ 0.07
HDAC6-227ENST00000485102 Q9Y3F1 56 aa15.48■□□□□ 0.07
HDAC6-227ENST00000485102 ASTN1O14525 1302 aa15.47■□□□□ 0.07
HDAC6-227ENST00000485102 CSF2RAP15509 400 aa15.47■□□□□ 0.07
HDAC6-227ENST00000485102 NOVP48745 357 aa15.47■□□□□ 0.07
HDAC6-227ENST00000485102 SLC4A3P48751 1232 aa15.47■□□□□ 0.07
HDAC6-227ENST00000485102 TFAP4Q01664 338 aa15.47■□□□□ 0.07
HDAC6-227ENST00000485102 TNFAIP2Q03169 654 aa15.47■□□□□ 0.07
HDAC6-227ENST00000485102 AKNAD1Q5T1N1 836 aa15.47■□□□□ 0.07
HDAC6-227ENST00000485102 ZNF365Q70YC5 407 aa15.47■□□□□ 0.07
HDAC6-227ENST00000485102 HERVK_113Q902F9 699 aa15.47■□□□□ 0.07
HDAC6-227ENST00000485102 VTI1AQ96AJ9 217 aa15.47■□□□□ 0.07
HDAC6-227ENST00000485102 PBX4Q9BYU1 374 aa15.47■□□□□ 0.07
HDAC6-227ENST00000485102 PRDM6Q9NQX0 595 aa15.47■□□□□ 0.07
HDAC6-227ENST00000485102 SOWAHBA6NEL2 793 aa15.46■□□□□ 0.07
HDAC6-227ENST00000485102 ERC2O15083 957 aa15.46■□□□□ 0.07
HDAC6-227ENST00000485102 SLC1A4P43007 532 aa15.46■□□□□ 0.07
HDAC6-227ENST00000485102 PPARAQ07869 468 aa15.46■□□□□ 0.07
HDAC6-227ENST00000485102 TJAP1Q5JTD0 557 aa15.46■□□□□ 0.07
HDAC6-227ENST00000485102 ZMYM1Q5SVZ6 1142 aa15.46■□□□□ 0.07
HDAC6-227ENST00000485102 IQSEC1Q6DN90 963 aa15.46■□□□□ 0.07
HDAC6-227ENST00000485102 RCSD1Q6JBY9 416 aa15.46■□□□□ 0.07
HDAC6-227ENST00000485102 MORC4Q8TE76 937 aa15.46■□□□□ 0.07
HDAC6-227ENST00000485102 IL23AQ9NPF7 189 aa15.46■□□□□ 0.07
HDAC6-227ENST00000485102 RNF146Q9NTX7 359 aa15.46■□□□□ 0.07
HDAC6-227ENST00000485102 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms