RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-223ENST00000485024 SSU72P8A0A1W2PR75 194 aa6.38□□□□□ -1.39
VPS8-223ENST00000485024 YARSP54577 528 aaKnown RBP6.38□□□□□ -1.39
VPS8-223ENST00000485024 RPS26P62854 115 aaKnown RBP6.38□□□□□ -1.39
VPS8-223ENST00000485024 NR1I3Q14994 352 aa6.38□□□□□ -1.39
VPS8-223ENST00000485024 SLFN12Q8IYM2 578 aa6.38□□□□□ -1.39
VPS8-223ENST00000485024 SETDB2Q96T68 719 aa6.38□□□□□ -1.39
VPS8-223ENST00000485024 ERVK13-1Q9NX77 482 aa6.38□□□□□ -1.39
VPS8-223ENST00000485024 IMPACTQ9P2X3 320 aa6.38□□□□□ -1.39
VPS8-223ENST00000485024 BIN2Q9UBW5 565 aaPredicted RBP6.38□□□□□ -1.39
VPS8-223ENST00000485024 TNFRSF18Q9Y5U5 241 aa6.38□□□□□ -1.39
VPS8-223ENST00000485024 LTBP3Q9NS15 1303 aa6.37□□□□□ -1.39
VPS8-223ENST00000485024 USP17L7P0C7H9 530 aa6.37□□□□□ -1.39
VPS8-223ENST00000485024 PLCG1P19174 1290 aa6.37□□□□□ -1.39
VPS8-223ENST00000485024 RPL6Q02878 288 aaKnown RBP6.36□□□□□ -1.39
VPS8-223ENST00000485024 TMEM201Q5SNT2 666 aa6.36□□□□□ -1.39
VPS8-223ENST00000485024 LIMS2Q7Z4I7 341 aa6.36□□□□□ -1.39
VPS8-223ENST00000485024 FAN1Q9Y2M0 1017 aa6.36□□□□□ -1.39
VPS8-223ENST00000485024 SARSP49591 514 aaKnown RBP6.35□□□□□ -1.39
VPS8-223ENST00000485024 EAF1Q96JC9 268 aaPredicted RBP6.35□□□□□ -1.39
VPS8-223ENST00000485024 JMJD8Q96S16 334 aa6.35□□□□□ -1.39
VPS8-223ENST00000485024 SPATA6Q9NWH7 488 aaPredicted RBP6.35□□□□□ -1.39
VPS8-223ENST00000485024 TTF2Q9UNY4 1162 aaKnown RBP6.35□□□□□ -1.39
VPS8-223ENST00000485024 A0A1W2PQ45 241 aaPredicted RBP6.34□□□□□ -1.39
VPS8-223ENST00000485024 A0A1W2PQY0 241 aa6.34□□□□□ -1.39
VPS8-223ENST00000485024 LMNB1P20700 586 aa6.34□□□□□ -1.39
VPS8-223ENST00000485024 SNW1Q13573 536 aaKnown RBP6.34□□□□□ -1.39
VPS8-223ENST00000485024 SMN1Q16637 294 aaKnown RBP6.34□□□□□ -1.39
VPS8-223ENST00000485024 AGMOQ6ZNB7 445 aa6.34□□□□□ -1.39
VPS8-223ENST00000485024 RNF38Q9H0F5 515 aa6.34□□□□□ -1.39
VPS8-223ENST00000485024 CUX2O14529 1486 aa6.34□□□□□ -1.4
VPS8-223ENST00000485024 TREHO43280 583 aa6.33□□□□□ -1.4
VPS8-223ENST00000485024 DBHP09172 617 aa6.33□□□□□ -1.4
VPS8-223ENST00000485024 MVKQ03426 396 aa6.33□□□□□ -1.4
VPS8-223ENST00000485024 ICAM4Q14773 271 aa6.33□□□□□ -1.4
VPS8-223ENST00000485024 TSNAXIP1Q2TAA8 658 aa6.33□□□□□ -1.4
VPS8-223ENST00000485024 ZSCAN29Q8IWY8 852 aaPredicted RBP6.33□□□□□ -1.4
VPS8-223ENST00000485024 ADAMTS17Q8TE56 1095 aa6.33□□□□□ -1.4
VPS8-223ENST00000485024 FBF1Q8TES7 1133 aa6.33□□□□□ -1.4
VPS8-223ENST00000485024 CCDC74BQ96LY2 380 aa6.33□□□□□ -1.4
VPS8-223ENST00000485024 NOX5Q96PH1 765 aa6.33□□□□□ -1.4
VPS8-223ENST00000485024 MIR1-1HGQ9H1L0 117 aa6.33□□□□□ -1.4
VPS8-223ENST00000485024 MINPP1Q9UNW1 487 aa6.33□□□□□ -1.4
VPS8-223ENST00000485024 INVSQ9Y283 1065 aa6.33□□□□□ -1.4
VPS8-223ENST00000485024 CHURC1-FNTBB4DL54 471 aa6.32□□□□□ -1.4
VPS8-223ENST00000485024 GIPC1O14908 333 aa6.32□□□□□ -1.4
VPS8-223ENST00000485024 PRAMEF1O95521 474 aa6.32□□□□□ -1.4
VPS8-223ENST00000485024 ZNF326Q5BKZ1 582 aaKnown RBP6.32□□□□□ -1.4
VPS8-223ENST00000485024 B3GNT8Q7Z7M8 397 aa6.32□□□□□ -1.4
VPS8-223ENST00000485024 TMEM52Q8NDY8 209 aa6.32□□□□□ -1.4
VPS8-223ENST00000485024 KLC2Q9H0B6 622 aa6.32□□□□□ -1.4
VPS8-223ENST00000485024 C12orf49Q9H741 205 aa6.32□□□□□ -1.4
VPS8-223ENST00000485024 NTMQ9P121 344 aa6.32□□□□□ -1.4
VPS8-223ENST00000485024 FAM8A1Q9UBU6 413 aa6.32□□□□□ -1.4
VPS8-223ENST00000485024 PCSK5Q92824 1860 aa6.31□□□□□ -1.4
VPS8-223ENST00000485024 ASGR2P07307 311 aa6.31□□□□□ -1.4
VPS8-223ENST00000485024 TFE3P19532 575 aaPredicted RBP6.31□□□□□ -1.4
VPS8-223ENST00000485024 PAQR3Q6TCH7 311 aa6.31□□□□□ -1.4
VPS8-223ENST00000485024 DNAJC14Q6Y2X3 702 aaPredicted RBP6.31□□□□□ -1.4
VPS8-223ENST00000485024 CD248Q9HCU0 757 aa6.31□□□□□ -1.4
VPS8-223ENST00000485024 SRGAP3O43295 1099 aa6.3□□□□□ -1.4
VPS8-223ENST00000485024 CYBBP04839 570 aa6.3□□□□□ -1.4
VPS8-223ENST00000485024 ITGAEP38570 1179 aa6.3□□□□□ -1.4
VPS8-223ENST00000485024 LIG3P49916 1009 aa6.3□□□□□ -1.4
VPS8-223ENST00000485024 INHBEP58166 350 aa6.3□□□□□ -1.4
VPS8-223ENST00000485024 PRR5P85299 388 aa6.3□□□□□ -1.4
VPS8-223ENST00000485024 GLB1LQ6UWU2 654 aa6.3□□□□□ -1.4
VPS8-223ENST00000485024 KIF2CQ99661 725 aa6.3□□□□□ -1.4
VPS8-223ENST00000485024 BCL2L13Q9BXK5 485 aa6.3□□□□□ -1.4
VPS8-223ENST00000485024 KLHL3Q9UH77 587 aa6.3□□□□□ -1.4
VPS8-223ENST00000485024 DCTN4Q9UJW0 460 aa6.3□□□□□ -1.4
VPS8-223ENST00000485024 DNAJA2O60884 412 aa6.29□□□□□ -1.4
VPS8-223ENST00000485024 NCAM1P13591 858 aa6.29□□□□□ -1.4
VPS8-223ENST00000485024 FHL2Q14192 279 aa6.29□□□□□ -1.4
VPS8-223ENST00000485024 MAP3K11Q16584 847 aa6.29□□□□□ -1.4
VPS8-223ENST00000485024 NBPF9Q3BBW0 867 aa6.29□□□□□ -1.4
VPS8-223ENST00000485024 PALM2Q8IXS6 379 aa6.29□□□□□ -1.4
VPS8-223ENST00000485024 ZNF536O15090 1300 aa6.28□□□□□ -1.4
VPS8-223ENST00000485024 MAPK1P28482 360 aa6.28□□□□□ -1.4
VPS8-223ENST00000485024 TGFB2P61812 414 aa6.28□□□□□ -1.4
VPS8-223ENST00000485024 CCDC85BQ15834 202 aaPredicted RBP6.28□□□□□ -1.4
VPS8-223ENST00000485024 PHACTR4Q8IZ21 702 aa6.28□□□□□ -1.4
VPS8-223ENST00000485024 JARID2Q92833 1246 aaPredicted RBP6.28□□□□□ -1.4
VPS8-223ENST00000485024 ASB16Q96NS5 453 aa6.28□□□□□ -1.4
VPS8-223ENST00000485024 CDK5RAP1Q96SZ6 601 aaKnown RBP6.28□□□□□ -1.4
VPS8-223ENST00000485024 CDADC1Q9BWV3 514 aa6.28□□□□□ -1.4
VPS8-223ENST00000485024 REV1Q9UBZ9 1251 aa6.28□□□□□ -1.4
VPS8-223ENST00000485024 ANKRD33BA6NCL7 494 aa6.27□□□□□ -1.41
VPS8-223ENST00000485024 RGL3Q3MIN7 710 aa6.27□□□□□ -1.41
VPS8-223ENST00000485024 LGI4Q8N135 537 aa6.27□□□□□ -1.41
VPS8-223ENST00000485024 ZNF428Q96B54 188 aa6.27□□□□□ -1.41
VPS8-223ENST00000485024 WWC3Q9ULE0 1092 aa6.27□□□□□ -1.41
VPS8-223ENST00000485024 SIGLEC6O43699 453 aa6.26□□□□□ -1.41
VPS8-223ENST00000485024 ZNF205O95201 554 aa6.26□□□□□ -1.41
VPS8-223ENST00000485024 NAF1Q96HR8 494 aaKnown RBP6.26□□□□□ -1.41
VPS8-223ENST00000485024 BCAS3Q9H6U6 928 aa6.26□□□□□ -1.41
VPS8-223ENST00000485024 AP5S1Q9NUS5 200 aa6.26□□□□□ -1.41
VPS8-223ENST00000485024 F8W031 263 aaPredicted RBP6.25□□□□□ -1.41
VPS8-223ENST00000485024 UBOX5O94941 541 aa6.25□□□□□ -1.41
VPS8-223ENST00000485024 PMLP29590 882 aa6.25□□□□□ -1.41
VPS8-223ENST00000485024 RNF4P78317 190 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms