RNA–Protein interactions for RNA: ENST00000484990.1

COL13A1-209, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 360 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-209ENST00000484990 UPF3AQ9H1J1 476 aaKnown RBP13.77□□□□□ -0.21
COL13A1-209ENST00000484990 RAVER2Q9HCJ3 691 aaKnown RBP13.77□□□□□ -0.21
COL13A1-209ENST00000484990 SYNPO2Q9UMS6 1093 aa13.77□□□□□ -0.21
COL13A1-209ENST00000484990 MYH7P12883 1935 aa13.76□□□□□ -0.21
COL13A1-209ENST00000484990 MYADML2A6NDP7 307 aa13.76□□□□□ -0.21
COL13A1-209ENST00000484990 GSG1L2A8MUP6 293 aa13.76□□□□□ -0.21
COL13A1-209ENST00000484990 CABYRO75952 493 aa13.76□□□□□ -0.21
COL13A1-209ENST00000484990 FGBP02675 491 aa13.76□□□□□ -0.21
COL13A1-209ENST00000484990 RAB30Q15771 203 aa13.76□□□□□ -0.21
COL13A1-209ENST00000484990 AKNAD1Q5T1N1 836 aa13.76□□□□□ -0.21
COL13A1-209ENST00000484990 ZNF365Q70YC5 407 aa13.76□□□□□ -0.21
COL13A1-209ENST00000484990 NOL8Q76FK4 1167 aaKnown RBP13.76□□□□□ -0.21
COL13A1-209ENST00000484990 ARMCX2Q7L311 632 aa13.76□□□□□ -0.21
COL13A1-209ENST00000484990 STK11IPQ8N1F8 1099 aa13.76□□□□□ -0.21
COL13A1-209ENST00000484990 PPM1EQ8WY54 764 aa13.76□□□□□ -0.21
COL13A1-209ENST00000484990 LRRCC1Q9C099 1032 aa13.76□□□□□ -0.21
COL13A1-209ENST00000484990 SLC38A10Q9HBR0 1119 aa13.76□□□□□ -0.21
COL13A1-209ENST00000484990 COG6Q9Y2V7 657 aa13.76□□□□□ -0.21
COL13A1-209ENST00000484990 ASB14A6NK59 587 aa13.75□□□□□ -0.21
COL13A1-209ENST00000484990 ZEB2O60315 1214 aa13.75□□□□□ -0.21
COL13A1-209ENST00000484990 TTLL1O95922 423 aa13.75□□□□□ -0.21
COL13A1-209ENST00000484990 CHGBP05060 677 aa13.75□□□□□ -0.21
COL13A1-209ENST00000484990 GNAT2P19087 354 aa13.75□□□□□ -0.21
COL13A1-209ENST00000484990 RASIP1Q5U651 963 aa13.75□□□□□ -0.21
COL13A1-209ENST00000484990 CCDC144CPQ8IYA2 1237 aa13.75□□□□□ -0.21
COL13A1-209ENST00000484990 USP38Q8NB14 1042 aa13.75□□□□□ -0.21
COL13A1-209ENST00000484990 CHURC1Q8WUH1 139 aa13.75□□□□□ -0.21
COL13A1-209ENST00000484990 PPP1R12CQ9BZL4 782 aa13.75□□□□□ -0.21
COL13A1-209ENST00000484990 PRDM12Q9H4Q4 367 aa13.75□□□□□ -0.21
COL13A1-209ENST00000484990 IL23AQ9NPF7 189 aa13.75□□□□□ -0.21
COL13A1-209ENST00000484990 MCM3APO60318 1980 aa13.74□□□□□ -0.21
COL13A1-209ENST00000484990 GRXCR1A8MXD5 290 aa13.74□□□□□ -0.21
COL13A1-209ENST00000484990 APPP05067 770 aa13.74□□□□□ -0.21
COL13A1-209ENST00000484990 ACRP10323 421 aa13.74□□□□□ -0.21
COL13A1-209ENST00000484990 BMP3P12645 472 aa13.74□□□□□ -0.21
COL13A1-209ENST00000484990 TDO2P48775 406 aa13.74□□□□□ -0.21
COL13A1-209ENST00000484990 NKX3-2P78367 333 aa13.74□□□□□ -0.21
COL13A1-209ENST00000484990 TNFAIP2Q03169 654 aa13.74□□□□□ -0.21
COL13A1-209ENST00000484990 LRRFIP1Q32MZ4 808 aaKnown RBP13.74□□□□□ -0.21
COL13A1-209ENST00000484990 FAM126BQ8IXS8 530 aa13.74□□□□□ -0.21
COL13A1-209ENST00000484990 GMCL1P1Q8NEA9 526 aa13.74□□□□□ -0.21
COL13A1-209ENST00000484990 HERVK_113Q902F9 699 aa13.74□□□□□ -0.21
COL13A1-209ENST00000484990 ACAD9Q9H845 621 aa13.74□□□□□ -0.21
COL13A1-209ENST00000484990 SLC28A3Q9HAS3 691 aa13.74□□□□□ -0.21
COL13A1-209ENST00000484990 ECHDC1Q9NTX5 307 aa13.74□□□□□ -0.21
COL13A1-209ENST00000484990 MTMR4Q9NYA4 1195 aa13.74□□□□□ -0.21
COL13A1-209ENST00000484990 MYH4Q9Y623 1939 aa13.74□□□□□ -0.21
COL13A1-209ENST00000484990 CDH23Q9H251 3354 aa13.73□□□□□ -0.21
COL13A1-209ENST00000484990 IGKV6D-41A0A0C4DH26 115 aa13.73□□□□□ -0.21
COL13A1-209ENST00000484990 PATL2C9JE40 543 aaKnown RBP13.73□□□□□ -0.21
COL13A1-209ENST00000484990 TMEM232C9JQI7 657 aa13.73□□□□□ -0.21
COL13A1-209ENST00000484990 RNF113AO15541 343 aaKnown RBP13.73□□□□□ -0.21
COL13A1-209ENST00000484990 CD4P01730 458 aa13.73□□□□□ -0.21
COL13A1-209ENST00000484990 ZFYP08048 801 aaPredicted RBP13.73□□□□□ -0.21
COL13A1-209ENST00000484990 IGFBP4P22692 258 aa13.73□□□□□ -0.21
COL13A1-209ENST00000484990 PBX2P40425 430 aa13.73□□□□□ -0.21
COL13A1-209ENST00000484990 IRX5P78411 483 aaPredicted RBP13.73□□□□□ -0.21
COL13A1-209ENST00000484990 MRPS5P82675 430 aaKnown RBP13.73□□□□□ -0.21
COL13A1-209ENST00000484990 PDE4BQ07343 736 aa13.73□□□□□ -0.21
COL13A1-209ENST00000484990 TKFCQ3LXA3 575 aa13.73□□□□□ -0.21
COL13A1-209ENST00000484990 PPP4R3BQ5MIZ7 849 aa13.73□□□□□ -0.21
COL13A1-209ENST00000484990 SLFN13Q68D06 897 aa13.73□□□□□ -0.21
COL13A1-209ENST00000484990 RPUSD2Q8IZ73 545 aaKnown RBP13.73□□□□□ -0.21
COL13A1-209ENST00000484990 KBTBD3Q8NAB2 608 aa13.73□□□□□ -0.21
COL13A1-209ENST00000484990 IL27Q8NEV9 243 aa13.73□□□□□ -0.21
COL13A1-209ENST00000484990 APPBP2Q92624 585 aa13.73□□□□□ -0.21
COL13A1-209ENST00000484990 CEP95Q96GE4 821 aa13.73□□□□□ -0.21
COL13A1-209ENST00000484990 GPATCH3Q96I76 525 aa13.73□□□□□ -0.21
COL13A1-209ENST00000484990 AP5M1Q9H0R1 490 aa13.73□□□□□ -0.21
COL13A1-209ENST00000484990 TSPYL2Q9H2G4 693 aaPredicted RBP13.73□□□□□ -0.21
COL13A1-209ENST00000484990 THEGQ9P2T0 379 aa13.73□□□□□ -0.21
COL13A1-209ENST00000484990 ISY1Q9ULR0 285 aaKnown RBP13.73□□□□□ -0.21
COL13A1-209ENST00000484990 NCOR1O75376 2440 aa13.73□□□□□ -0.21
COL13A1-209ENST00000484990 GREB1LQ9C091 1923 aaPredicted RBP13.72□□□□□ -0.21
COL13A1-209ENST00000484990 ADCY6O43306 1168 aa13.72□□□□□ -0.21
COL13A1-209ENST00000484990 SLC3A2P08195 630 aaKnown RBP13.72□□□□□ -0.21
COL13A1-209ENST00000484990 TSPY3P0CV98 308 aa13.72□□□□□ -0.21
COL13A1-209ENST00000484990 TSPY8P0CW00 308 aa13.72□□□□□ -0.21
COL13A1-209ENST00000484990 COL9A1P20849 921 aa13.72□□□□□ -0.21
COL13A1-209ENST00000484990 CYP2C18P33260 490 aa13.72□□□□□ -0.21
COL13A1-209ENST00000484990 STAT2P52630 851 aa13.72□□□□□ -0.21
COL13A1-209ENST00000484990 BEX3Q00994 111 aa13.72□□□□□ -0.21
COL13A1-209ENST00000484990 CNTN2Q02246 1040 aa13.72□□□□□ -0.21
COL13A1-209ENST00000484990 IKQ13123 557 aaPredicted RBP13.72□□□□□ -0.21
COL13A1-209ENST00000484990 ITGA7Q13683 1181 aa13.72□□□□□ -0.21
COL13A1-209ENST00000484990 IQSEC1Q6DN90 963 aa13.72□□□□□ -0.21
COL13A1-209ENST00000484990 FAM160B2Q86V87 743 aa13.72□□□□□ -0.21
COL13A1-209ENST00000484990 SLC43A3Q8NBI5 491 aa13.72□□□□□ -0.21
COL13A1-209ENST00000484990 OSBP2Q969R2 916 aa13.72□□□□□ -0.21
COL13A1-209ENST00000484990 FGD4Q96M96 766 aa13.72□□□□□ -0.21
COL13A1-209ENST00000484990 ASB2Q96Q27 587 aa13.72□□□□□ -0.21
COL13A1-209ENST00000484990 NACAP1Q9BZK3 213 aa13.72□□□□□ -0.21
COL13A1-209ENST00000484990 HIPK3Q9H422 1215 aa13.72□□□□□ -0.21
COL13A1-209ENST00000484990 HOMER2Q9NSB8 354 aa13.72□□□□□ -0.21
COL13A1-209ENST00000484990 SPTBN5Q9NRC6 3674 aaKnown RBP13.71□□□□□ -0.21
COL13A1-209ENST00000484990 CTAGE5O15320 804 aa13.71□□□□□ -0.21
COL13A1-209ENST00000484990 DYNC1LI2O43237 492 aaPredicted RBP13.71□□□□□ -0.21
COL13A1-209ENST00000484990 GPAA1O43292 621 aa13.71□□□□□ -0.21
COL13A1-209ENST00000484990 PRDM1O75626 825 aa13.71□□□□□ -0.21
COL13A1-209ENST00000484990 CCDC85BQ15834 202 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms