RNA–Protein interactions for RNA: ENST00000484378.1

HLA-C-207, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 862 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-207ENST00000484378 HAND2P61296 217 aa33.54■■■□□ 2.96
HLA-C-207ENST00000484378 RCSD1Q6JBY9 416 aa33.54■■■□□ 2.96
HLA-C-207ENST00000484378 MAMDC4Q6UXC1 1216 aa33.54■■■□□ 2.96
HLA-C-207ENST00000484378 RNF180Q86T96 592 aa33.54■■■□□ 2.96
HLA-C-207ENST00000484378 TDHQ8IZJ6 230 aa33.54■■■□□ 2.96
HLA-C-207ENST00000484378 FERMT2Q96AC1 680 aa33.54■■■□□ 2.96
HLA-C-207ENST00000484378 LENG1Q96BZ8 264 aaPredicted RBP33.54■■■□□ 2.96
HLA-C-207ENST00000484378 ACAD9Q9H845 621 aa33.54■■■□□ 2.96
HLA-C-207ENST00000484378 ZHX1Q9UKY1 873 aaPredicted RBP33.54■■■□□ 2.96
HLA-C-207ENST00000484378 SDSP20132 328 aa33.53■■■□□ 2.96
HLA-C-207ENST00000484378 CCDC96Q2M329 555 aa33.53■■■□□ 2.96
HLA-C-207ENST00000484378 LRCH3Q96II8 777 aa33.53■■■□□ 2.96
HLA-C-207ENST00000484378 LBHD1Q9BQE6 289 aaPredicted RBP33.53■■■□□ 2.96
HLA-C-207ENST00000484378 SNAI1O95863 264 aaPredicted RBP33.52■■■□□ 2.96
HLA-C-207ENST00000484378 NOVP48745 357 aa33.52■■■□□ 2.96
HLA-C-207ENST00000484378 AGBL1Q96MI9 1066 aa33.52■■■□□ 2.96
HLA-C-207ENST00000484378 RNF146Q9NTX7 359 aa33.52■■■□□ 2.96
HLA-C-207ENST00000484378 ZNF536O15090 1300 aa33.52■■■□□ 2.96
HLA-C-207ENST00000484378 DCAF4Q8WV16 495 aa33.51■■■□□ 2.95
HLA-C-207ENST00000484378 FAM184BQ9ULE4 1060 aa33.51■■■□□ 2.95
HLA-C-207ENST00000484378 PRR12Q9ULL5 1215 aa33.51■■■□□ 2.95
HLA-C-207ENST00000484378 PHF24Q9UPV7 400 aa33.51■■■□□ 2.95
HLA-C-207ENST00000484378 SNX17Q15036 470 aa33.5■■■□□ 2.95
HLA-C-207ENST00000484378 TRIM60Q495X7 471 aa33.5■■■□□ 2.95
HLA-C-207ENST00000484378 CCDC174Q6PII3 467 aa33.5■■■□□ 2.95
HLA-C-207ENST00000484378 FGD4Q96M96 766 aa33.5■■■□□ 2.95
HLA-C-207ENST00000484378 DIAPH3Q9NSV4 1193 aa33.5■■■□□ 2.95
HLA-C-207ENST00000484378 CDKN2AIPQ9NXV6 580 aaPredicted RBP33.5■■■□□ 2.95
HLA-C-207ENST00000484378 TOP1P11387 765 aaKnown RBP33.49■■■□□ 2.95
HLA-C-207ENST00000484378 ALAS1P13196 640 aa33.49■■■□□ 2.95
HLA-C-207ENST00000484378 SNAP25P60880 206 aa33.49■■■□□ 2.95
HLA-C-207ENST00000484378 TKFCQ3LXA3 575 aa33.49■■■□□ 2.95
HLA-C-207ENST00000484378 POTEB2H3BUK9 544 aa33.48■■■□□ 2.95
HLA-C-207ENST00000484378 PCP11498 1178 aaKnown RBP33.48■■■□□ 2.95
HLA-C-207ENST00000484378 ACVR2BQ13705 512 aa33.48■■■□□ 2.95
HLA-C-207ENST00000484378 AKNAD1Q5T1N1 836 aa33.48■■■□□ 2.95
HLA-C-207ENST00000484378 MFSD6Q6ZSS7 791 aa33.48■■■□□ 2.95
HLA-C-207ENST00000484378 TRERF1Q96PN7 1200 aa33.48■■■□□ 2.95
HLA-C-207ENST00000484378 A1CFQ9NQ94 594 aaKnown RBP33.48■■■□□ 2.95
HLA-C-207ENST00000484378 PRDM5Q9NQX1 630 aaPredicted RBP33.48■■■□□ 2.95
HLA-C-207ENST00000484378 TCP11L1Q9NUJ3 509 aa33.48■■■□□ 2.95
HLA-C-207ENST00000484378 SYNRGQ9UMZ2 1314 aa33.48■■■□□ 2.95
HLA-C-207ENST00000484378 MCM3APO60318 1980 aa33.47■■■□□ 2.95
HLA-C-207ENST00000484378 ADAMTS4O75173 837 aa33.47■■■□□ 2.95
HLA-C-207ENST00000484378 LRIT3Q3SXY7 679 aa33.47■■■□□ 2.95
HLA-C-207ENST00000484378 CWC27Q6UX04 472 aaKnown RBP33.47■■■□□ 2.95
HLA-C-207ENST00000484378 ARMCX2Q7L311 632 aa33.47■■■□□ 2.95
HLA-C-207ENST00000484378 TBC1D10CQ8IV04 446 aa33.47■■■□□ 2.95
HLA-C-207ENST00000484378 TMEM47Q9BQJ4 181 aa33.47■■■□□ 2.95
HLA-C-207ENST00000484378 ABHD16BQ9H3Z7 469 aa33.47■■■□□ 2.95
HLA-C-207ENST00000484378 RNF41Q9H4P4 317 aaPredicted RBP33.47■■■□□ 2.95
HLA-C-207ENST00000484378 SUPT16HQ9Y5B9 1047 aaKnown RBP33.47■■■□□ 2.95
HLA-C-207ENST00000484378 LTBP2Q14767 1821 aa33.46■■■□□ 2.95
HLA-C-207ENST00000484378 CNTN2Q02246 1040 aa33.46■■■□□ 2.95
HLA-C-207ENST00000484378 A0A1W2PQ45 241 aaPredicted RBP33.45■■■□□ 2.95
HLA-C-207ENST00000484378 A0A1W2PQY0 241 aa33.45■■■□□ 2.95
HLA-C-207ENST00000484378 HIP1O00291 1037 aa33.45■■■□□ 2.95
HLA-C-207ENST00000484378 C1orf53Q5VUE5 145 aa33.45■■■□□ 2.95
HLA-C-207ENST00000484378 CCDC144CPQ8IYA2 1237 aa33.45■■■□□ 2.95
HLA-C-207ENST00000484378 FAM133AQ8N9E0 248 aa33.45■■■□□ 2.95
HLA-C-207ENST00000484378 CCPG1Q9ULG6 757 aa33.45■■■□□ 2.95
HLA-C-207ENST00000484378 LAMA4Q16363 1823 aa33.44■■■□□ 2.94
HLA-C-207ENST00000484378 FRMPD2Q68DX3 1309 aaPredicted RBP33.44■■■□□ 2.94
HLA-C-207ENST00000484378 DUSP11O75319 330 aaKnown RBP33.43■■■□□ 2.94
HLA-C-207ENST00000484378 SLC16A2P36021 539 aa33.43■■■□□ 2.94
HLA-C-207ENST00000484378 CCDC144BQ3MJ40 725 aa33.43■■■□□ 2.94
HLA-C-207ENST00000484378 TTBK2Q6IQ55 1244 aa33.43■■■□□ 2.94
HLA-C-207ENST00000484378 TSEN34Q9BSV6 310 aaKnown RBP33.43■■■□□ 2.94
HLA-C-207ENST00000484378 PDLIM7Q9NR12 457 aa33.43■■■□□ 2.94
HLA-C-207ENST00000484378 ZNF213O14771 459 aa33.42■■■□□ 2.94
HLA-C-207ENST00000484378 ICAM1P05362 532 aa33.42■■■□□ 2.94
HLA-C-207ENST00000484378 TLE2Q04725 743 aa33.42■■■□□ 2.94
HLA-C-207ENST00000484378 MUM1L1Q5H9M0 696 aa33.42■■■□□ 2.94
HLA-C-207ENST00000484378 SYDE2Q5VT97 1194 aa33.42■■■□□ 2.94
HLA-C-207ENST00000484378 ESR2Q92731 530 aa33.42■■■□□ 2.94
HLA-C-207ENST00000484378 RANBP17Q9H2T7 1088 aaKnown RBP33.42■■■□□ 2.94
HLA-C-207ENST00000484378 GPCPD1Q9NPB8 672 aa33.42■■■□□ 2.94
HLA-C-207ENST00000484378 NEDD4P46934 1319 aa33.42■■■□□ 2.94
HLA-C-207ENST00000484378 ACLYP53396 1101 aa33.41■■■□□ 2.94
HLA-C-207ENST00000484378 BTNL9Q6UXG8 535 aa33.41■■■□□ 2.94
HLA-C-207ENST00000484378 SOWAHBA6NEL2 793 aa33.4■■■□□ 2.94
HLA-C-207ENST00000484378 PDHBP11177 359 aa33.4■■■□□ 2.94
HLA-C-207ENST00000484378 KLHDC9Q8NEP7 349 aa33.4■■■□□ 2.94
HLA-C-207ENST00000484378 TTC14Q96N46 770 aa33.4■■■□□ 2.94
HLA-C-207ENST00000484378 SPC25Q9HBM1 224 aa33.4■■■□□ 2.94
HLA-C-207ENST00000484378 LAMA2P24043 3122 aaKnown RBP33.39■■■□□ 2.94
HLA-C-207ENST00000484378 MOXD2PA6NHM9 499 aa33.39■■■□□ 2.94
HLA-C-207ENST00000484378 ASB14A6NK59 587 aa33.39■■■□□ 2.94
HLA-C-207ENST00000484378 ADCY6O43306 1168 aa33.39■■■□□ 2.94
HLA-C-207ENST00000484378 C6orf222P0C671 652 aaPredicted RBP33.39■■■□□ 2.94
HLA-C-207ENST00000484378 GPR153Q6NV75 609 aa33.39■■■□□ 2.94
HLA-C-207ENST00000484378 NSMFQ6X4W1 530 aa33.39■■■□□ 2.94
HLA-C-207ENST00000484378 NUP133Q8WUM0 1156 aa33.39■■■□□ 2.94
HLA-C-207ENST00000484378 STARD7Q9NQZ5 370 aa33.39■■■□□ 2.94
HLA-C-207ENST00000484378 CYP39A1Q9NYL5 469 aa33.39■■■□□ 2.94
HLA-C-207ENST00000484378 MYADML2A6NDP7 307 aa33.38■■■□□ 2.93
HLA-C-207ENST00000484378 PQBP1O60828 265 aaKnown RBP33.38■■■□□ 2.93
HLA-C-207ENST00000484378 KCNA10Q16322 511 aa33.38■■■□□ 2.93
HLA-C-207ENST00000484378 SH3RF1Q7Z6J0 888 aa33.38■■■□□ 2.93
HLA-C-207ENST00000484378 KATNBL1Q9H079 304 aa33.38■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms