RNA–Protein interactions for RNA: ENST00000484372.1

SNRNP200-206, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 581 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-206ENST00000484372 FOXP2O15409 715 aa14.09□□□□□ -0.15
SNRNP200-206ENST00000484372 PGK1P00558 417 aa14.09□□□□□ -0.15
SNRNP200-206ENST00000484372 FGRP09769 529 aa14.09□□□□□ -0.15
SNRNP200-206ENST00000484372 TOP1P11387 765 aaKnown RBP14.09□□□□□ -0.15
SNRNP200-206ENST00000484372 TAL1P17542 331 aaPredicted RBP14.09□□□□□ -0.15
SNRNP200-206ENST00000484372 NT5C2P49902 561 aa14.09□□□□□ -0.15
SNRNP200-206ENST00000484372 IRX6P78412 446 aaPredicted RBP14.09□□□□□ -0.15
SNRNP200-206ENST00000484372 NMIQ13287 307 aaPredicted RBP14.09□□□□□ -0.15
SNRNP200-206ENST00000484372 ACVR2BQ13705 512 aa14.09□□□□□ -0.15
SNRNP200-206ENST00000484372 C1orf53Q5VUE5 145 aa14.09□□□□□ -0.15
SNRNP200-206ENST00000484372 MFSD6Q6ZSS7 791 aa14.09□□□□□ -0.15
SNRNP200-206ENST00000484372 KCTD1Q719H9 257 aa14.09□□□□□ -0.15
SNRNP200-206ENST00000484372 NUP133Q8WUM0 1156 aa14.09□□□□□ -0.15
SNRNP200-206ENST00000484372 LRCH3Q96II8 777 aa14.09□□□□□ -0.15
SNRNP200-206ENST00000484372 IL17RBQ9NRM6 502 aa14.09□□□□□ -0.15
SNRNP200-206ENST00000484372 RNF146Q9NTX7 359 aa14.09□□□□□ -0.15
SNRNP200-206ENST00000484372 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.09□□□□□ -0.15
SNRNP200-206ENST00000484372 PHF24Q9UPV7 400 aa14.09□□□□□ -0.15
SNRNP200-206ENST00000484372 MTMR7Q9Y216 660 aa14.09□□□□□ -0.15
SNRNP200-206ENST00000484372 PLXNA1Q9UIW2 1896 aa14.08□□□□□ -0.16
SNRNP200-206ENST00000484372 SOX1O00570 391 aaPredicted RBP14.08□□□□□ -0.16
SNRNP200-206ENST00000484372 NMT2O60551 498 aa14.08□□□□□ -0.16
SNRNP200-206ENST00000484372 DUSP11O75319 330 aaKnown RBP14.08□□□□□ -0.16
SNRNP200-206ENST00000484372 SNAI1O95863 264 aaPredicted RBP14.08□□□□□ -0.16
SNRNP200-206ENST00000484372 ALAS1P13196 640 aa14.08□□□□□ -0.16
SNRNP200-206ENST00000484372 NUCB1Q02818 461 aa14.08□□□□□ -0.16
SNRNP200-206ENST00000484372 SNX17Q15036 470 aa14.08□□□□□ -0.16
SNRNP200-206ENST00000484372 TRIM60Q495X7 471 aa14.08□□□□□ -0.16
SNRNP200-206ENST00000484372 CHMP4CQ96CF2 233 aa14.08□□□□□ -0.16
SNRNP200-206ENST00000484372 TRERF1Q96PN7 1200 aa14.08□□□□□ -0.16
SNRNP200-206ENST00000484372 OSBPL3Q9H4L5 887 aa14.08□□□□□ -0.16
SNRNP200-206ENST00000484372 INCENPQ9NQS7 918 aa14.08□□□□□ -0.16
SNRNP200-206ENST00000484372 DIAPH3Q9NSV4 1193 aa14.08□□□□□ -0.16
SNRNP200-206ENST00000484372 TCP11L1Q9NUJ3 509 aa14.08□□□□□ -0.16
SNRNP200-206ENST00000484372 PNMA2Q9UL42 364 aa14.08□□□□□ -0.16
SNRNP200-206ENST00000484372 PRR12Q9ULL5 1215 aa14.08□□□□□ -0.16
SNRNP200-206ENST00000484372 TACC3Q9Y6A5 838 aa14.08□□□□□ -0.16
SNRNP200-206ENST00000484372 SZT2Q5T011 3432 aa14.07□□□□□ -0.16
SNRNP200-206ENST00000484372 MOXD2PA6NHM9 499 aa14.07□□□□□ -0.16
SNRNP200-206ENST00000484372 ASB14A6NK59 587 aa14.07□□□□□ -0.16
SNRNP200-206ENST00000484372 ZNF213O14771 459 aa14.07□□□□□ -0.16
SNRNP200-206ENST00000484372 SDSP20132 328 aa14.07□□□□□ -0.16
SNRNP200-206ENST00000484372 AKNAD1Q5T1N1 836 aa14.07□□□□□ -0.16
SNRNP200-206ENST00000484372 CCDC174Q6PII3 467 aa14.07□□□□□ -0.16
SNRNP200-206ENST00000484372 ARMCX2Q7L311 632 aa14.07□□□□□ -0.16
SNRNP200-206ENST00000484372 PLEKHM2Q8IWE5 1019 aa14.07□□□□□ -0.16
SNRNP200-206ENST00000484372 PCSK9Q8NBP7 692 aaKnown RBP14.07□□□□□ -0.16
SNRNP200-206ENST00000484372 ESR2Q92731 530 aa14.07□□□□□ -0.16
SNRNP200-206ENST00000484372 AGBL1Q96MI9 1066 aa14.07□□□□□ -0.16
SNRNP200-206ENST00000484372 TTC14Q96N46 770 aa14.07□□□□□ -0.16
SNRNP200-206ENST00000484372 STARD7Q9NQZ5 370 aa14.07□□□□□ -0.16
SNRNP200-206ENST00000484372 CCPG1Q9ULG6 757 aa14.07□□□□□ -0.16
SNRNP200-206ENST00000484372 SMCHD1A6NHR9 2005 aa14.07□□□□□ -0.16
SNRNP200-206ENST00000484372 A0A1W2PQ45 241 aaPredicted RBP14.06□□□□□ -0.16
SNRNP200-206ENST00000484372 A0A1W2PQY0 241 aa14.06□□□□□ -0.16
SNRNP200-206ENST00000484372 ADAMTS4O75173 837 aa14.06□□□□□ -0.16
SNRNP200-206ENST00000484372 NOVP48745 357 aa14.06□□□□□ -0.16
SNRNP200-206ENST00000484372 HAND2P61296 217 aa14.06□□□□□ -0.16
SNRNP200-206ENST00000484372 TLE2Q04725 743 aa14.06□□□□□ -0.16
SNRNP200-206ENST00000484372 CCDC178Q5BJE1 867 aa14.06□□□□□ -0.16
SNRNP200-206ENST00000484372 NOL8Q76FK4 1167 aaKnown RBP14.06□□□□□ -0.16
SNRNP200-206ENST00000484372 ZNF589Q86UQ0 364 aaPredicted RBP14.06□□□□□ -0.16
SNRNP200-206ENST00000484372 CCDC144CPQ8IYA2 1237 aa14.06□□□□□ -0.16
SNRNP200-206ENST00000484372 VTI1AQ96AJ9 217 aa14.06□□□□□ -0.16
SNRNP200-206ENST00000484372 GLT1D1Q96MS3 346 aa14.06□□□□□ -0.16
SNRNP200-206ENST00000484372 A1CFQ9NQ94 594 aaKnown RBP14.06□□□□□ -0.16
SNRNP200-206ENST00000484372 LAMA3Q16787 3333 aa14.05□□□□□ -0.16
SNRNP200-206ENST00000484372 DCDC2CA8MYV0 355 aa14.05□□□□□ -0.16
SNRNP200-206ENST00000484372 IGHDP01880 384 aa14.05□□□□□ -0.16
SNRNP200-206ENST00000484372 ICAM1P05362 532 aa14.05□□□□□ -0.16
SNRNP200-206ENST00000484372 CLTBP09497 229 aa14.05□□□□□ -0.16
SNRNP200-206ENST00000484372 C6orf222P0C671 652 aaPredicted RBP14.05□□□□□ -0.16
SNRNP200-206ENST00000484372 ACLYP53396 1101 aa14.05□□□□□ -0.16
SNRNP200-206ENST00000484372 CCDC144BQ3MJ40 725 aa14.05□□□□□ -0.16
SNRNP200-206ENST00000484372 SYDE2Q5VT97 1194 aa14.05□□□□□ -0.16
SNRNP200-206ENST00000484372 CWC27Q6UX04 472 aaKnown RBP14.05□□□□□ -0.16
SNRNP200-206ENST00000484372 IQCA1Q86XH1 822 aa14.05□□□□□ -0.16
SNRNP200-206ENST00000484372 DEFB123Q8N688 67 aa14.05□□□□□ -0.16
SNRNP200-206ENST00000484372 FAM133AQ8N9E0 248 aa14.05□□□□□ -0.16
SNRNP200-206ENST00000484372 TMEM47Q9BQJ4 181 aa14.05□□□□□ -0.16
SNRNP200-206ENST00000484372 PDLIM7Q9NR12 457 aa14.05□□□□□ -0.16
SNRNP200-206ENST00000484372 ZNF536O15090 1300 aa14.05□□□□□ -0.16
SNRNP200-206ENST00000484372 MROH7Q68CQ1 1323 aa14.05□□□□□ -0.16
SNRNP200-206ENST00000484372 SYNRGQ9UMZ2 1314 aa14.05□□□□□ -0.16
SNRNP200-206ENST00000484372 PQBP1O60828 265 aaKnown RBP14.04□□□□□ -0.16
SNRNP200-206ENST00000484372 CST5P28325 142 aaPredicted RBP14.04□□□□□ -0.16
SNRNP200-206ENST00000484372 CNTN2Q02246 1040 aa14.04□□□□□ -0.16
SNRNP200-206ENST00000484372 KCNA10Q16322 511 aa14.04□□□□□ -0.16
SNRNP200-206ENST00000484372 GNASQ5JWF2 1037 aa14.04□□□□□ -0.16
SNRNP200-206ENST00000484372 BTNL9Q6UXG8 535 aa14.04□□□□□ -0.16
SNRNP200-206ENST00000484372 NSMFQ6X4W1 530 aa14.04□□□□□ -0.16
SNRNP200-206ENST00000484372 KLHDC9Q8NEP7 349 aa14.04□□□□□ -0.16
SNRNP200-206ENST00000484372 LENG1Q96BZ8 264 aaPredicted RBP14.04□□□□□ -0.16
SNRNP200-206ENST00000484372 TOX2Q96NM4 488 aa14.04□□□□□ -0.16
SNRNP200-206ENST00000484372 MPHOSPH6Q99547 160 aaKnown RBP14.04□□□□□ -0.16
SNRNP200-206ENST00000484372 RANBP17Q9H2T7 1088 aaKnown RBP14.04□□□□□ -0.16
SNRNP200-206ENST00000484372 GPCPD1Q9NPB8 672 aa14.04□□□□□ -0.16
SNRNP200-206ENST00000484372 ADD3Q9UEY8 706 aaKnown RBP14.04□□□□□ -0.16
SNRNP200-206ENST00000484372 CTNNA3Q9UI47 895 aa14.04□□□□□ -0.16
SNRNP200-206ENST00000484372 ELP1O95163 1332 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms