RNA–Protein interactions for RNA: ENST00000484141.5

PCGF3-211, Transcript of polycomb group ring finger 3, humanhuman

TSL 2

Gene PCGF3, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-211ENST00000484141 CCDC174Q6PII3 467 aa19.73■□□□□ 0.75
PCGF3-211ENST00000484141 STAG1Q8WVM7 1258 aa19.73■□□□□ 0.75
PCGF3-211ENST00000484141 CDX2Q99626 313 aaPredicted RBP19.73■□□□□ 0.75
PCGF3-211ENST00000484141 TMEM47Q9BQJ4 181 aa19.73■□□□□ 0.75
PCGF3-211ENST00000484141 ZKSCAN3Q9BRR0 538 aa19.73■□□□□ 0.75
PCGF3-211ENST00000484141 TINF2Q9BSI4 451 aa19.73■□□□□ 0.75
PCGF3-211ENST00000484141 SLC5A4Q9NY91 659 aa19.73■□□□□ 0.75
PCGF3-211ENST00000484141 CTDP1Q9Y5B0 961 aaPredicted RBP19.73■□□□□ 0.75
PCGF3-211ENST00000484141 DDX49Q9Y6V7 483 aaKnown RBP19.73■□□□□ 0.75
PCGF3-211ENST00000484141 LAMA4Q16363 1823 aa19.72■□□□□ 0.75
PCGF3-211ENST00000484141 DNAJC25-GNG10A0A024R161 153 aa19.72■□□□□ 0.75
PCGF3-211ENST00000484141 STAT2P52630 851 aa19.72■□□□□ 0.75
PCGF3-211ENST00000484141 IKQ13123 557 aaPredicted RBP19.72■□□□□ 0.75
PCGF3-211ENST00000484141 AKNAD1Q5T1N1 836 aa19.72■□□□□ 0.75
PCGF3-211ENST00000484141 RCSD1Q6JBY9 416 aa19.72■□□□□ 0.75
PCGF3-211ENST00000484141 MAFAQ8NHW3 353 aaPredicted RBP19.72■□□□□ 0.75
PCGF3-211ENST00000484141 DIAPH3Q9NSV4 1193 aa19.72■□□□□ 0.75
PCGF3-211ENST00000484141 PRR12Q9ULL5 1215 aa19.72■□□□□ 0.75
PCGF3-211ENST00000484141 ZMYM6O95789 1325 aa19.72■□□□□ 0.75
PCGF3-211ENST00000484141 FRMPD2Q68DX3 1309 aaPredicted RBP19.72■□□□□ 0.75
PCGF3-211ENST00000484141 LAMA2P24043 3122 aaKnown RBP19.71■□□□□ 0.75
PCGF3-211ENST00000484141 DNM1LO00429 736 aa19.71■□□□□ 0.75
PCGF3-211ENST00000484141 MSCO60682 206 aa19.71■□□□□ 0.75
PCGF3-211ENST00000484141 SNAI1O95863 264 aaPredicted RBP19.71■□□□□ 0.75
PCGF3-211ENST00000484141 ZNF865P0CJ78 1059 aaPredicted RBP19.71■□□□□ 0.75
PCGF3-211ENST00000484141 RTP1P59025 263 aa19.71■□□□□ 0.75
PCGF3-211ENST00000484141 TICAM2Q86XR7 235 aa19.71■□□□□ 0.75
PCGF3-211ENST00000484141 DDX11Q96FC9 970 aa19.71■□□□□ 0.75
PCGF3-211ENST00000484141 EYSQ5T1H1 3165 aa19.7■□□□□ 0.74
PCGF3-211ENST00000484141 COPB2P35606 906 aa19.7■□□□□ 0.74
PCGF3-211ENST00000484141 IRX5P78411 483 aaPredicted RBP19.7■□□□□ 0.74
PCGF3-211ENST00000484141 CNTN2Q02246 1040 aa19.7■□□□□ 0.74
PCGF3-211ENST00000484141 CCDC96Q2M329 555 aa19.7■□□□□ 0.74
PCGF3-211ENST00000484141 MUM1L1Q5H9M0 696 aa19.7■□□□□ 0.74
PCGF3-211ENST00000484141 TTC22Q5TAA0 569 aa19.7■□□□□ 0.74
PCGF3-211ENST00000484141 MFSD6Q6ZSS7 791 aa19.7■□□□□ 0.74
PCGF3-211ENST00000484141 GPCPD1Q9NPB8 672 aa19.7■□□□□ 0.74
PCGF3-211ENST00000484141 DIS3Q9Y2L1 958 aaKnown RBP19.7■□□□□ 0.74
PCGF3-211ENST00000484141 LCTP09848 1927 aa19.69■□□□□ 0.74
PCGF3-211ENST00000484141 PGK1P00558 417 aa19.69■□□□□ 0.74
PCGF3-211ENST00000484141 LRRC41Q15345 812 aa19.69■□□□□ 0.74
PCGF3-211ENST00000484141 SHHQ15465 462 aa19.69■□□□□ 0.74
PCGF3-211ENST00000484141 FAM160B2Q86V87 743 aa19.69■□□□□ 0.74
PCGF3-211ENST00000484141 ANKRD35Q8N283 1001 aa19.69■□□□□ 0.74
PCGF3-211ENST00000484141 CHURC1Q8WUH1 139 aa19.69■□□□□ 0.74
PCGF3-211ENST00000484141 FERMT2Q96AC1 680 aa19.69■□□□□ 0.74
PCGF3-211ENST00000484141 PURBQ96QR8 312 aaKnown RBP19.69■□□□□ 0.74
PCGF3-211ENST00000484141 SEMA6BQ9H3T3 888 aa19.69■□□□□ 0.74
PCGF3-211ENST00000484141 PRDM6Q9NQX0 595 aa19.69■□□□□ 0.74
PCGF3-211ENST00000484141 TCP11L1Q9NUJ3 509 aa19.69■□□□□ 0.74
PCGF3-211ENST00000484141 ATP11BQ9Y2G3 1177 aa19.69■□□□□ 0.74
PCGF3-211ENST00000484141 ZNF213O14771 459 aa19.68■□□□□ 0.74
PCGF3-211ENST00000484141 ADCY6O43306 1168 aa19.68■□□□□ 0.74
PCGF3-211ENST00000484141 ALAS1P13196 640 aa19.68■□□□□ 0.74
PCGF3-211ENST00000484141 OAZ1P54368 228 aa19.68■□□□□ 0.74
PCGF3-211ENST00000484141 SKAP1Q86WV1 359 aa19.68■□□□□ 0.74
PCGF3-211ENST00000484141 CPVLQ9H3G5 476 aa19.68■□□□□ 0.74
PCGF3-211ENST00000484141 PRDM5Q9NQX1 630 aaPredicted RBP19.68■□□□□ 0.74
PCGF3-211ENST00000484141 RNF146Q9NTX7 359 aa19.68■□□□□ 0.74
PCGF3-211ENST00000484141 B4E1Z4 1266 aa19.67■□□□□ 0.74
PCGF3-211ENST00000484141 PLA2G6O60733 806 aa19.67■□□□□ 0.74
PCGF3-211ENST00000484141 TOP1P11387 765 aaKnown RBP19.67■□□□□ 0.74
PCGF3-211ENST00000484141 ADCYAP1R1P41586 468 aa19.67■□□□□ 0.74
PCGF3-211ENST00000484141 C9orf50Q5SZB4 431 aa19.67■□□□□ 0.74
PCGF3-211ENST00000484141 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.67■□□□□ 0.746e-7■■■■□ 24.8
PCGF3-211ENST00000484141 CHST13Q8NET6 341 aa19.67■□□□□ 0.74
PCGF3-211ENST00000484141 DCAF4Q8WV16 495 aa19.67■□□□□ 0.74
PCGF3-211ENST00000484141 MYLIPQ8WY64 445 aa19.67■□□□□ 0.74
PCGF3-211ENST00000484141 A1CFQ9NQ94 594 aaKnown RBP19.67■□□□□ 0.74
PCGF3-211ENST00000484141 ASTN1O14525 1302 aa19.67■□□□□ 0.74
PCGF3-211ENST00000484141 SPTBN5Q9NRC6 3674 aaKnown RBP19.67■□□□□ 0.74
PCGF3-211ENST00000484141 SOWAHBA6NEL2 793 aa19.66■□□□□ 0.74
PCGF3-211ENST00000484141 KDM4AO75164 1064 aa19.66■□□□□ 0.74
PCGF3-211ENST00000484141 PDHBP11177 359 aa19.66■□□□□ 0.74
PCGF3-211ENST00000484141 PTGS1P23219 599 aa19.66■□□□□ 0.74
PCGF3-211ENST00000484141 MFAP1P55081 439 aaKnown RBP19.66■□□□□ 0.74
PCGF3-211ENST00000484141 MAMDC4Q6UXC1 1216 aa19.66■□□□□ 0.74
PCGF3-211ENST00000484141 TRERF1Q96PN7 1200 aa19.66■□□□□ 0.74
PCGF3-211ENST00000484141 XPNPEP3Q9NQH7 507 aa19.66■□□□□ 0.74
PCGF3-211ENST00000484141 ZHX1Q9UKY1 873 aaPredicted RBP19.66■□□□□ 0.74
PCGF3-211ENST00000484141 MYADML2A6NDP7 307 aa19.65■□□□□ 0.74
PCGF3-211ENST00000484141 GOLGA8HP0CJ92 632 aa19.65■□□□□ 0.74
PCGF3-211ENST00000484141 PTH1RQ03431 593 aa19.65■□□□□ 0.74
PCGF3-211ENST00000484141 PPP4R3BQ5MIZ7 849 aa19.65■□□□□ 0.74
PCGF3-211ENST00000484141 SYDE2Q5VT97 1194 aa19.65■□□□□ 0.74
PCGF3-211ENST00000484141 ARRDC4Q8NCT1 418 aa19.65■□□□□ 0.74
PCGF3-211ENST00000484141 BADQ92934 168 aa19.65■□□□□ 0.74
PCGF3-211ENST00000484141 DSCC1Q9BVC3 393 aa19.65■□□□□ 0.74
PCGF3-211ENST00000484141 RANBP17Q9H2T7 1088 aaKnown RBP19.65■□□□□ 0.74
PCGF3-211ENST00000484141 ACAD9Q9H845 621 aa19.65■□□□□ 0.74
PCGF3-211ENST00000484141 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.65■□□□□ 0.74
PCGF3-211ENST00000484141 KBTBD13C9JR72 458 aa19.64■□□□□ 0.73
PCGF3-211ENST00000484141 HIP1O00291 1037 aa19.64■□□□□ 0.73
PCGF3-211ENST00000484141 RARBP10826 455 aa19.64■□□□□ 0.73
PCGF3-211ENST00000484141 FOSL2P15408 326 aa19.64■□□□□ 0.73
PCGF3-211ENST00000484141 SMAD3P84022 425 aaKnown RBP19.64■□□□□ 0.73
PCGF3-211ENST00000484141 BTNL9Q6UXG8 535 aa19.64■□□□□ 0.73
PCGF3-211ENST00000484141 SLC39A5Q6ZMH5 540 aa19.64■□□□□ 0.73
PCGF3-211ENST00000484141 ARMCX2Q7L311 632 aa19.64■□□□□ 0.73
PCGF3-211ENST00000484141 CCDC144CPQ8IYA2 1237 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms