RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 PTGS1P23219 599 aa13.1□□□□□ -0.31
SMARCC1-205ENST00000483847 CCL23P55773 120 aa13.1□□□□□ -0.31
SMARCC1-205ENST00000483847 PPP2R2DQ66LE6 453 aa13.1□□□□□ -0.31
SMARCC1-205ENST00000483847 CXCL17Q6UXB2 119 aa13.1□□□□□ -0.31
SMARCC1-205ENST00000483847 ZNF467Q7Z7K2 595 aaPredicted RBP13.1□□□□□ -0.31
SMARCC1-205ENST00000483847 CPXCR1Q8N123 301 aa13.1□□□□□ -0.31
SMARCC1-205ENST00000483847 VWCEQ96DN2 955 aa13.1□□□□□ -0.31
SMARCC1-205ENST00000483847 KATNBL1Q9H079 304 aa13.1□□□□□ -0.31
SMARCC1-205ENST00000483847 WNT8AQ9H1J5 351 aa13.1□□□□□ -0.31
SMARCC1-205ENST00000483847 ABHD16BQ9H3Z7 469 aa13.1□□□□□ -0.31
SMARCC1-205ENST00000483847 HIPK3Q9H422 1215 aa13.1□□□□□ -0.31
SMARCC1-205ENST00000483847 EPHX3Q9H6B9 360 aa13.1□□□□□ -0.31
SMARCC1-205ENST00000483847 SPC25Q9HBM1 224 aa13.1□□□□□ -0.31
SMARCC1-205ENST00000483847 ATP8A2Q9NTI2 1148 aa13.1□□□□□ -0.31
SMARCC1-205ENST00000483847 ASTN1O14525 1302 aa13.1□□□□□ -0.31
SMARCC1-205ENST00000483847 GRIN2DO15399 1336 aa13.1□□□□□ -0.31
SMARCC1-205ENST00000483847 PRRC2BQ5JSZ5 2229 aaKnown RBP13.09□□□□□ -0.31
SMARCC1-205ENST00000483847 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.09□□□□□ -0.31
SMARCC1-205ENST00000483847 RFXAPO00287 272 aa13.09□□□□□ -0.31
SMARCC1-205ENST00000483847 RLBP1P12271 317 aa13.09□□□□□ -0.31
SMARCC1-205ENST00000483847 CEP85Q6P2H3 762 aa13.09□□□□□ -0.31
SMARCC1-205ENST00000483847 ARMCX2Q7L311 632 aa13.09□□□□□ -0.31
SMARCC1-205ENST00000483847 SLC43A3Q8NBI5 491 aa13.09□□□□□ -0.31
SMARCC1-205ENST00000483847 LRFN3Q9BTN0 628 aa13.09□□□□□ -0.31
SMARCC1-205ENST00000483847 NOC4LQ9BVI4 516 aaKnown RBP13.09□□□□□ -0.31
SMARCC1-205ENST00000483847 TRPV6Q9H1D0 765 aa13.09□□□□□ -0.31
SMARCC1-205ENST00000483847 TSPYL2Q9H2G4 693 aaPredicted RBP13.09□□□□□ -0.31
SMARCC1-205ENST00000483847 MTIF3Q9H2K0 278 aaKnown RBP13.09□□□□□ -0.31
SMARCC1-205ENST00000483847 RAVER2Q9HCJ3 691 aaKnown RBP13.09□□□□□ -0.31
SMARCC1-205ENST00000483847 ADD2P35612 726 aa13.08□□□□□ -0.32
SMARCC1-205ENST00000483847 NKX3-2P78367 333 aa13.08□□□□□ -0.32
SMARCC1-205ENST00000483847 SKIV2LQ15477 1246 aaKnown RBP13.08□□□□□ -0.32
SMARCC1-205ENST00000483847 ERC1Q8IUD2 1116 aa13.08□□□□□ -0.32
SMARCC1-205ENST00000483847 ITPRIPQ8IWB1 547 aa13.08□□□□□ -0.32
SMARCC1-205ENST00000483847 CCDC144CPQ8IYA2 1237 aa13.08□□□□□ -0.32
SMARCC1-205ENST00000483847 PCDHA11Q9Y5I1 949 aa13.08□□□□□ -0.32
SMARCC1-205ENST00000483847 SLC4A7Q9Y6M7 1214 aa13.08□□□□□ -0.32
SMARCC1-205ENST00000483847 DDX49Q9Y6V7 483 aaKnown RBP13.08□□□□□ -0.32
SMARCC1-205ENST00000483847 F5H6K3 240 aa13.07□□□□□ -0.32
SMARCC1-205ENST00000483847 ATP2A1O14983 1001 aa13.07□□□□□ -0.32
SMARCC1-205ENST00000483847 ERC2O15083 957 aa13.07□□□□□ -0.32
SMARCC1-205ENST00000483847 B4GALT4O60513 344 aa13.07□□□□□ -0.32
SMARCC1-205ENST00000483847 NDUFB10O96000 172 aa13.07□□□□□ -0.32
SMARCC1-205ENST00000483847 CNTN2Q02246 1040 aa13.07□□□□□ -0.32
SMARCC1-205ENST00000483847 KLRC3Q07444 240 aa13.07□□□□□ -0.32
SMARCC1-205ENST00000483847 KRT40Q6A162 431 aa13.07□□□□□ -0.32
SMARCC1-205ENST00000483847 CTR9Q6PD62 1173 aa13.07□□□□□ -0.32
SMARCC1-205ENST00000483847 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.07□□□□□ -0.32
SMARCC1-205ENST00000483847 ANKRD35Q8N283 1001 aa13.07□□□□□ -0.32
SMARCC1-205ENST00000483847 PRPF38AQ8NAV1 312 aaKnown RBP13.07□□□□□ -0.32
SMARCC1-205ENST00000483847 RHPN1Q8TCX5 695 aa13.07□□□□□ -0.32
SMARCC1-205ENST00000483847 KHSRPQ92945 711 aaKnown RBP eCLIP13.07□□□□□ -0.323e-7■■□□□ 13.5
SMARCC1-205ENST00000483847 KIFC2Q96AC6 838 aa13.07□□□□□ -0.32
SMARCC1-205ENST00000483847 SCLYQ96I15 445 aa13.07□□□□□ -0.32
SMARCC1-205ENST00000483847 BCL11AQ9H165 835 aa13.07□□□□□ -0.32
SMARCC1-205ENST00000483847 CERS4Q9HA82 394 aa13.07□□□□□ -0.32
SMARCC1-205ENST00000483847 MTCH2Q9Y6C9 303 aa13.07□□□□□ -0.32
SMARCC1-205ENST00000483847 LRRC37A2A6NM11 1700 aa13.07□□□□□ -0.32
SMARCC1-205ENST00000483847 ZBED9Q6R2W3 1325 aa13.07□□□□□ -0.32
SMARCC1-205ENST00000483847 EPOPA6NHQ4 379 aa13.06□□□□□ -0.32
SMARCC1-205ENST00000483847 ZBBXA8MT70 800 aa13.06□□□□□ -0.32
SMARCC1-205ENST00000483847 PSMC6P62333 389 aa13.06□□□□□ -0.32
SMARCC1-205ENST00000483847 TNFAIP2Q03169 654 aa13.06□□□□□ -0.32
SMARCC1-205ENST00000483847 ITGA7Q13683 1181 aa13.06□□□□□ -0.32
SMARCC1-205ENST00000483847 AAK1Q2M2I8 961 aa13.06□□□□□ -0.32
SMARCC1-205ENST00000483847 TMEM63BQ5T3F8 832 aa13.06□□□□□ -0.32
SMARCC1-205ENST00000483847 AMOTL1Q8IY63 956 aa13.06□□□□□ -0.32
SMARCC1-205ENST00000483847 STK11IPQ8N1F8 1099 aa13.06□□□□□ -0.32
SMARCC1-205ENST00000483847 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.06□□□□□ -0.32
SMARCC1-205ENST00000483847 SLC38A10Q9HBR0 1119 aa13.06□□□□□ -0.32
SMARCC1-205ENST00000483847 HOMER2Q9NSB8 354 aa13.06□□□□□ -0.32
SMARCC1-205ENST00000483847 PAG1Q9NWQ8 432 aa13.06□□□□□ -0.32
SMARCC1-205ENST00000483847 SLC4A4Q9Y6R1 1079 aa13.06□□□□□ -0.32
SMARCC1-205ENST00000483847 SOWAHBA6NEL2 793 aa13.05□□□□□ -0.32
SMARCC1-205ENST00000483847 ZBED4O75132 1171 aa13.05□□□□□ -0.32
SMARCC1-205ENST00000483847 ARHGEF15O94989 841 aa13.05□□□□□ -0.32
SMARCC1-205ENST00000483847 CA3P07451 260 aa13.05□□□□□ -0.32
SMARCC1-205ENST00000483847 ATP2A2P16615 1042 aaKnown RBP13.05□□□□□ -0.32
SMARCC1-205ENST00000483847 RASA1P20936 1047 aa13.05□□□□□ -0.32
SMARCC1-205ENST00000483847 TTLL4Q14679 1199 aa13.05□□□□□ -0.32
SMARCC1-205ENST00000483847 FSCN1Q16658 493 aaKnown RBP13.05□□□□□ -0.32
SMARCC1-205ENST00000483847 NOL8Q76FK4 1167 aaKnown RBP13.05□□□□□ -0.32
SMARCC1-205ENST00000483847 TLK2Q86UE8 772 aa13.05□□□□□ -0.32
SMARCC1-205ENST00000483847 FTSJ3Q8IY81 847 aaKnown RBP13.05□□□□□ -0.32
SMARCC1-205ENST00000483847 FAM133AQ8N9E0 248 aa13.05□□□□□ -0.32
SMARCC1-205ENST00000483847 AGBL1Q96MI9 1066 aa13.05□□□□□ -0.32
SMARCC1-205ENST00000483847 C11orf16Q9NQ32 467 aa13.05□□□□□ -0.32
SMARCC1-205ENST00000483847 NYAP2Q9P242 653 aa13.05□□□□□ -0.32
SMARCC1-205ENST00000483847 GNEQ9Y223 722 aaKnown RBP13.05□□□□□ -0.32
SMARCC1-205ENST00000483847 HCN4Q9Y3Q4 1203 aa13.05□□□□□ -0.32
SMARCC1-205ENST00000483847 PIEZO1Q92508 2521 aa13.05□□□□□ -0.32
SMARCC1-205ENST00000483847 SCN5AQ14524 2016 aa13.05□□□□□ -0.32
SMARCC1-205ENST00000483847 MYH7P12883 1935 aa13.04□□□□□ -0.32
SMARCC1-205ENST00000483847 MYH4Q9Y623 1939 aa13.04□□□□□ -0.32
SMARCC1-205ENST00000483847 TLL1O43897 1013 aa13.04□□□□□ -0.32
SMARCC1-205ENST00000483847 SMPD1P17405 629 aa13.04□□□□□ -0.32
SMARCC1-205ENST00000483847 POU3F3P20264 500 aaPredicted RBP13.04□□□□□ -0.32
SMARCC1-205ENST00000483847 CHST13Q8NET6 341 aa13.04□□□□□ -0.32
SMARCC1-205ENST00000483847 PUS7LQ9H0K6 701 aaKnown RBP13.04□□□□□ -0.32
SMARCC1-205ENST00000483847 BOLA2Q9H3K6 86 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms