RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 ABCB5Q2M3G0 1257 aa10.08□□□□□ -0.8
CDC42SE1-204ENST00000483763 CCDC148Q8NFR7 591 aa10.08□□□□□ -0.8
CDC42SE1-204ENST00000483763 NUP88Q99567 741 aaPredicted RBP10.08□□□□□ -0.8
CDC42SE1-204ENST00000483763 RRAGCQ9HB90 399 aa10.08□□□□□ -0.8
CDC42SE1-204ENST00000483763 TMEM260Q9NX78 707 aa10.08□□□□□ -0.8
CDC42SE1-204ENST00000483763 SEC63Q9UGP8 760 aaKnown RBP10.08□□□□□ -0.8
CDC42SE1-204ENST00000483763 PSME4Q14997 1843 aa10.08□□□□□ -0.8
CDC42SE1-204ENST00000483763 CCDC194A0A1B0GVG4 234 aa10.08□□□□□ -0.8
CDC42SE1-204ENST00000483763 WNT10BO00744 389 aa10.08□□□□□ -0.8
CDC42SE1-204ENST00000483763 ICA1Q05084 483 aa10.08□□□□□ -0.8
CDC42SE1-204ENST00000483763 CCDC96Q2M329 555 aa10.08□□□□□ -0.8
CDC42SE1-204ENST00000483763 SPDYE2Q495Y8 402 aa10.08□□□□□ -0.8
CDC42SE1-204ENST00000483763 ZNF830Q96NB3 372 aaPredicted RBP10.08□□□□□ -0.8
CDC42SE1-204ENST00000483763 VEZTQ9HBM0 779 aa10.08□□□□□ -0.8
CDC42SE1-204ENST00000483763 NYAP2Q9P242 653 aa10.08□□□□□ -0.8
CDC42SE1-204ENST00000483763 BIN2Q9UBW5 565 aaPredicted RBP10.08□□□□□ -0.8
CDC42SE1-204ENST00000483763 HDAC9Q9UKV0 1011 aa10.08□□□□□ -0.8
CDC42SE1-204ENST00000483763 F5H6K3 240 aa10.07□□□□□ -0.8
CDC42SE1-204ENST00000483763 CASP1P29466 404 aa10.07□□□□□ -0.8
CDC42SE1-204ENST00000483763 KLRC3Q07444 240 aa10.07□□□□□ -0.8
CDC42SE1-204ENST00000483763 JAKMIP3Q5VZ66 844 aa10.07□□□□□ -0.8
CDC42SE1-204ENST00000483763 CIAPIN1Q6FI81 312 aa10.07□□□□□ -0.8
CDC42SE1-204ENST00000483763 GALNT17Q6IS24 598 aa10.07□□□□□ -0.8
CDC42SE1-204ENST00000483763 TMEM179Q6ZVK1 233 aa10.07□□□□□ -0.8
CDC42SE1-204ENST00000483763 MIGA2Q7L4E1 593 aa10.07□□□□□ -0.8
CDC42SE1-204ENST00000483763 FERMT2Q96AC1 680 aa10.07□□□□□ -0.8
CDC42SE1-204ENST00000483763 DHX58Q96C10 678 aa10.07□□□□□ -0.8
CDC42SE1-204ENST00000483763 TRIM34Q9BYJ4 488 aa10.07□□□□□ -0.8
CDC42SE1-204ENST00000483763 FAM13BQ9NYF5 915 aa10.07□□□□□ -0.8
CDC42SE1-204ENST00000483763 DDNO94850 711 aaPredicted RBP10.07□□□□□ -0.8
CDC42SE1-204ENST00000483763 CAVIN2O95810 425 aa10.07□□□□□ -0.8
CDC42SE1-204ENST00000483763 ECE1P42892 770 aa10.07□□□□□ -0.8
CDC42SE1-204ENST00000483763 SLC1A4P43007 532 aa10.07□□□□□ -0.8
CDC42SE1-204ENST00000483763 AOPEPQ8N6M6 819 aa10.07□□□□□ -0.8
CDC42SE1-204ENST00000483763 AGBL3Q8NEM8 1001 aa10.07□□□□□ -0.8
CDC42SE1-204ENST00000483763 FAM151AQ8WW52 585 aa10.07□□□□□ -0.8
CDC42SE1-204ENST00000483763 MTMR8Q96EF0 704 aa10.07□□□□□ -0.8
CDC42SE1-204ENST00000483763 ZBED3Q96IU2 234 aaPredicted RBP10.07□□□□□ -0.8
CDC42SE1-204ENST00000483763 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.07□□□□□ -0.8
CDC42SE1-204ENST00000483763 GPBP1L1Q9HC44 474 aaPredicted RBP10.07□□□□□ -0.8
CDC42SE1-204ENST00000483763 PGAP2Q9UHJ9 254 aa10.07□□□□□ -0.8
CDC42SE1-204ENST00000483763 ARFGEF1Q9Y6D6 1849 aa10.06□□□□□ -0.8
CDC42SE1-204ENST00000483763 MYH4Q9Y623 1939 aa10.06□□□□□ -0.8
CDC42SE1-204ENST00000483763 PNMA6FA0A0J9YX94 578 aa10.06□□□□□ -0.8
CDC42SE1-204ENST00000483763 BMP15O95972 392 aa10.06□□□□□ -0.8
CDC42SE1-204ENST00000483763 GNA11P29992 359 aa10.06□□□□□ -0.8
CDC42SE1-204ENST00000483763 NLRP12P59046 1061 aa10.06□□□□□ -0.8
CDC42SE1-204ENST00000483763 SNAP25P60880 206 aa10.06□□□□□ -0.8
CDC42SE1-204ENST00000483763 NCAPHQ15003 741 aa10.06□□□□□ -0.8
CDC42SE1-204ENST00000483763 POSTNQ15063 836 aa10.06□□□□□ -0.8
CDC42SE1-204ENST00000483763 HS1BP3Q53T59 392 aa10.06□□□□□ -0.8
CDC42SE1-204ENST00000483763 KIAA1755Q5JYT7 1200 aa10.06□□□□□ -0.8
CDC42SE1-204ENST00000483763 GPATCH4Q5T3I0 446 aaKnown RBP10.06□□□□□ -0.8
CDC42SE1-204ENST00000483763 SLFN13Q68D06 897 aa10.06□□□□□ -0.8
CDC42SE1-204ENST00000483763 ZSCAN30Q86W11 494 aa10.06□□□□□ -0.8
CDC42SE1-204ENST00000483763 CEP57L1Q8IYX8 460 aa10.06□□□□□ -0.8
CDC42SE1-204ENST00000483763 SPICE1Q8N0Z3 855 aa10.06□□□□□ -0.8
CDC42SE1-204ENST00000483763 SPC24Q8NBT2 197 aa10.06□□□□□ -0.8
CDC42SE1-204ENST00000483763 NAP1L5Q96NT1 182 aaPredicted RBP10.06□□□□□ -0.8
CDC42SE1-204ENST00000483763 MTRQ99707 1265 aa10.06□□□□□ -0.8
CDC42SE1-204ENST00000483763 C6orf50Q9HD87 102 aa10.06□□□□□ -0.8
CDC42SE1-204ENST00000483763 PP2D1A8MPX8 630 aa10.06□□□□□ -0.8
CDC42SE1-204ENST00000483763 NDUFB10O96000 172 aa10.06□□□□□ -0.8
CDC42SE1-204ENST00000483763 TAL1P17542 331 aaPredicted RBP10.06□□□□□ -0.8
CDC42SE1-204ENST00000483763 SARSP49591 514 aaKnown RBP10.06□□□□□ -0.8
CDC42SE1-204ENST00000483763 LETM2Q2VYF4 491 aa10.06□□□□□ -0.8
CDC42SE1-204ENST00000483763 RBM26Q5T8P6 1007 aaKnown RBP10.06□□□□□ -0.8
CDC42SE1-204ENST00000483763 MTMR14Q8NCE2 650 aa10.06□□□□□ -0.8
CDC42SE1-204ENST00000483763 ACER1Q8TDN7 264 aa10.06□□□□□ -0.8
CDC42SE1-204ENST00000483763 TBCKQ8TEA7 893 aa10.06□□□□□ -0.8
CDC42SE1-204ENST00000483763 STAMQ92783 540 aa10.06□□□□□ -0.8
CDC42SE1-204ENST00000483763 HSD3B7Q9H2F3 369 aa10.06□□□□□ -0.8
CDC42SE1-204ENST00000483763 MYOZ2Q9NPC6 264 aa10.06□□□□□ -0.8
CDC42SE1-204ENST00000483763 TMOD2Q9NZR1 351 aa10.06□□□□□ -0.8
CDC42SE1-204ENST00000483763 ASTN2O75129 1339 aaPredicted RBP10.05□□□□□ -0.8
CDC42SE1-204ENST00000483763 ESYT2A0FGR8 921 aa10.05□□□□□ -0.8
CDC42SE1-204ENST00000483763 ZBTB5O15062 677 aa10.05□□□□□ -0.8
CDC42SE1-204ENST00000483763 LMNB1P20700 586 aa10.05□□□□□ -0.8
CDC42SE1-204ENST00000483763 AFMP43652 599 aa10.05□□□□□ -0.8
CDC42SE1-204ENST00000483763 E2F4Q16254 413 aa10.05□□□□□ -0.8
CDC42SE1-204ENST00000483763 UBE2SQ16763 222 aa10.05□□□□□ -0.8
CDC42SE1-204ENST00000483763 NT5DC1Q5TFE4 455 aa10.05□□□□□ -0.8
CDC42SE1-204ENST00000483763 PLA2G4DQ86XP0 818 aa10.05□□□□□ -0.8
CDC42SE1-204ENST00000483763 ELOA2Q8IYF1 753 aaPredicted RBP10.05□□□□□ -0.8
CDC42SE1-204ENST00000483763 REXO1Q8N1G1 1221 aaKnown RBP10.05□□□□□ -0.8
CDC42SE1-204ENST00000483763 CCDC12Q8WUD4 166 aaPredicted RBP10.05□□□□□ -0.8
CDC42SE1-204ENST00000483763 TRIM5Q9C035 493 aa10.05□□□□□ -0.8
CDC42SE1-204ENST00000483763 TTC12Q9H892 705 aaPredicted RBP10.05□□□□□ -0.8
CDC42SE1-204ENST00000483763 HERC5Q9UII4 1024 aaKnown RBP10.05□□□□□ -0.8
CDC42SE1-204ENST00000483763 GJA3Q9Y6H8 435 aa10.05□□□□□ -0.8
CDC42SE1-204ENST00000483763 COL2A1P02458 1487 aaPredicted RBP10.05□□□□□ -0.8
CDC42SE1-204ENST00000483763 BECN2A8MW95 431 aa10.04□□□□□ -0.8
CDC42SE1-204ENST00000483763 CCNT1O60563 726 aaKnown RBP10.04□□□□□ -0.8
CDC42SE1-204ENST00000483763 PTMAP06454 111 aaKnown RBP10.04□□□□□ -0.8
CDC42SE1-204ENST00000483763 SLFN14P0C7P3 912 aa10.04□□□□□ -0.8
CDC42SE1-204ENST00000483763 TNIP1Q15025 636 aa10.04□□□□□ -0.8
CDC42SE1-204ENST00000483763 NONOQ15233 471 aaKnown RBP eCLIP10.04□□□□□ -0.8
CDC42SE1-204ENST00000483763 QRICH1Q2TAL8 776 aa10.04□□□□□ -0.8
CDC42SE1-204ENST00000483763 ARL6IP4Q66PJ3 421 aaKnown RBP10.04□□□□□ -0.8
CDC42SE1-204ENST00000483763 SAMD7Q7Z3H4 446 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms