RNA–Protein interactions for RNA: ENST00000483142.5

HDAC9-224, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 305 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-224ENST00000483142 REPS2Q8NFH8 660 aa5.34□□□□□ -1.55
HDAC9-224ENST00000483142 CTCFLQ8NI51 663 aaPredicted RBP5.34□□□□□ -1.55
HDAC9-224ENST00000483142 BRI3BPQ8WY22 251 aa5.34□□□□□ -1.55
HDAC9-224ENST00000483142 KHSRPQ92945 711 aaKnown RBP eCLIP5.34□□□□□ -1.55
HDAC9-224ENST00000483142 INTS4Q96HW7 963 aaKnown RBP5.34□□□□□ -1.55
HDAC9-224ENST00000483142 TMX3Q96JJ7 454 aa5.34□□□□□ -1.55
HDAC9-224ENST00000483142 FEZ1Q99689 392 aa5.34□□□□□ -1.55
HDAC9-224ENST00000483142 LZTS2Q9BRK4 669 aa5.34□□□□□ -1.55
HDAC9-224ENST00000483142 LLPHQ9BRT6 129 aaKnown RBP5.34□□□□□ -1.55
HDAC9-224ENST00000483142 RNF26Q9BY78 433 aaPredicted RBP5.34□□□□□ -1.55
HDAC9-224ENST00000483142 LRRC2Q9BYS8 371 aa5.34□□□□□ -1.55
HDAC9-224ENST00000483142 MAF1Q9H063 256 aa5.34□□□□□ -1.55
HDAC9-224ENST00000483142 RIOX1Q9H6W3 641 aa5.34□□□□□ -1.55
HDAC9-224ENST00000483142 ZNF408Q9H9D4 720 aa5.34□□□□□ -1.55
HDAC9-224ENST00000483142 MAD2L2Q9UI95 211 aa5.34□□□□□ -1.55
HDAC9-224ENST00000483142 PPP1R9AQ9ULJ8 1098 aa5.34□□□□□ -1.55
HDAC9-224ENST00000483142 SLC12A7Q9Y666 1083 aa5.34□□□□□ -1.55
HDAC9-224ENST00000483142 PLXNB2O15031 1838 aa5.34□□□□□ -1.55
HDAC9-224ENST00000483142 CCDC196A0A1B0GTZ2 297 aa5.33□□□□□ -1.56
HDAC9-224ENST00000483142 ESYT2A0FGR8 921 aa5.33□□□□□ -1.56
HDAC9-224ENST00000483142 TRIM75PA6NK02 468 aa5.33□□□□□ -1.56
HDAC9-224ENST00000483142 IGF2BP3O00425 579 aaKnown RBP eCLIP5.33□□□□□ -1.56
HDAC9-224ENST00000483142 CYTH3O43739 400 aa5.33□□□□□ -1.56
HDAC9-224ENST00000483142 PLEKHA8P1O95397 391 aa5.33□□□□□ -1.56
HDAC9-224ENST00000483142 CTDNEP1O95476 244 aa5.33□□□□□ -1.56
HDAC9-224ENST00000483142 PARP1P09874 1014 aaKnown RBP5.33□□□□□ -1.56
HDAC9-224ENST00000483142 CETPP11597 493 aa5.33□□□□□ -1.56
HDAC9-224ENST00000483142 BMP3P12645 472 aa5.33□□□□□ -1.56
HDAC9-224ENST00000483142 HSPA6P17066 643 aa5.33□□□□□ -1.56
HDAC9-224ENST00000483142 SLC1A4P43007 532 aa5.33□□□□□ -1.56
HDAC9-224ENST00000483142 STAT2P52630 851 aa5.33□□□□□ -1.56
HDAC9-224ENST00000483142 HMGCS2P54868 508 aa5.33□□□□□ -1.56
HDAC9-224ENST00000483142 HMGN5P82970 282 aaKnown RBP5.33□□□□□ -1.56
HDAC9-224ENST00000483142 SREBF2Q12772 1141 aa5.33□□□□□ -1.56
HDAC9-224ENST00000483142 PRKG1Q13976 671 aa5.33□□□□□ -1.56
HDAC9-224ENST00000483142 NOM1Q5C9Z4 860 aaKnown RBP5.33□□□□□ -1.56
HDAC9-224ENST00000483142 FAM83BQ5T0W9 1011 aa5.33□□□□□ -1.56
HDAC9-224ENST00000483142 PPP1R18Q6NYC8 613 aa5.33□□□□□ -1.56
HDAC9-224ENST00000483142 CATSPERGQ6ZRH7 1159 aa5.33□□□□□ -1.56
HDAC9-224ENST00000483142 FASTKD5Q7L8L6 764 aaKnown RBP5.33□□□□□ -1.56
HDAC9-224ENST00000483142 NBPF11Q86T75 865 aa5.33□□□□□ -1.56
HDAC9-224ENST00000483142 HSCBQ8IWL3 235 aa5.33□□□□□ -1.56
HDAC9-224ENST00000483142 FANCBQ8NB91 859 aa5.33□□□□□ -1.56
HDAC9-224ENST00000483142 NSUN7Q8NE18 718 aaKnown RBP5.33□□□□□ -1.56
HDAC9-224ENST00000483142 CHMP4CQ96CF2 233 aa5.33□□□□□ -1.56
HDAC9-224ENST00000483142 CAPNS2Q96L46 248 aa5.33□□□□□ -1.56
HDAC9-224ENST00000483142 MYL10Q9BUA6 226 aa5.33□□□□□ -1.56
HDAC9-224ENST00000483142 RANBP17Q9H2T7 1088 aaKnown RBP5.33□□□□□ -1.56
HDAC9-224ENST00000483142 TMOD4Q9NZQ9 345 aa5.33□□□□□ -1.56
HDAC9-224ENST00000483142 MORF4L1Q9UBU8 362 aa5.33□□□□□ -1.56
HDAC9-224ENST00000483142 CLIP2Q9UDT6 1046 aa5.33□□□□□ -1.56
HDAC9-224ENST00000483142 FEM1BQ9UK73 627 aa5.33□□□□□ -1.56
HDAC9-224ENST00000483142 PNMA3Q9UL41 463 aa5.33□□□□□ -1.56
HDAC9-224ENST00000483142 PNMA2Q9UL42 364 aa5.33□□□□□ -1.56
HDAC9-224ENST00000483142 ZNF214Q9UL59 606 aaPredicted RBP5.33□□□□□ -1.56
HDAC9-224ENST00000483142 ZHX2Q9Y6X8 837 aa5.33□□□□□ -1.56
HDAC9-224ENST00000483142 MGAMO43451 1857 aa5.32□□□□□ -1.56
HDAC9-224ENST00000483142 ZNF536O15090 1300 aa5.32□□□□□ -1.56
HDAC9-224ENST00000483142 FRMPD4Q14CM0 1322 aa5.32□□□□□ -1.56
HDAC9-224ENST00000483142 CCL15-CCL14A0A0B4J2E2 113 aa5.32□□□□□ -1.56
HDAC9-224ENST00000483142 PTPDC1A2A3K4 754 aa5.32□□□□□ -1.56
HDAC9-224ENST00000483142 USP17L15C9J2P7 530 aa5.32□□□□□ -1.56
HDAC9-224ENST00000483142 BTBD19C9JJ37 291 aa5.32□□□□□ -1.56
HDAC9-224ENST00000483142 USP17L13C9JLJ4 530 aa5.32□□□□□ -1.56
HDAC9-224ENST00000483142 USP17L11C9JVI0 530 aa5.32□□□□□ -1.56
HDAC9-224ENST00000483142 KLRF2D3W0D1 207 aa5.32□□□□□ -1.56
HDAC9-224ENST00000483142 USP17L18D6R9N7 530 aa5.32□□□□□ -1.56
HDAC9-224ENST00000483142 USP17L22D6RA61 530 aa5.32□□□□□ -1.56
HDAC9-224ENST00000483142 USP17L17D6RBQ6 530 aa5.32□□□□□ -1.56
HDAC9-224ENST00000483142 USP17L19D6RCP7 530 aa5.32□□□□□ -1.56
HDAC9-224ENST00000483142 USP17L20D6RJB6 530 aa5.32□□□□□ -1.56
HDAC9-224ENST00000483142 MAP3K7O43318 606 aa5.32□□□□□ -1.56
HDAC9-224ENST00000483142 PRPF3O43395 683 aaKnown RBP5.32□□□□□ -1.56
HDAC9-224ENST00000483142 DHX16O60231 1041 aaKnown RBP5.32□□□□□ -1.56
HDAC9-224ENST00000483142 CDKL5O76039 1030 aa5.32□□□□□ -1.56
HDAC9-224ENST00000483142 FMNL1O95466 1100 aaPredicted RBP5.32□□□□□ -1.56
HDAC9-224ENST00000483142 COPB2P35606 906 aa5.32□□□□□ -1.56
HDAC9-224ENST00000483142 DDIT3P35638 169 aa5.32□□□□□ -1.56
HDAC9-224ENST00000483142 MAP2K2P36507 400 aa5.32□□□□□ -1.56
HDAC9-224ENST00000483142 TM4SF4P48230 202 aa5.32□□□□□ -1.56
HDAC9-224ENST00000483142 ZNF157P51786 506 aaPredicted RBP5.32□□□□□ -1.56
HDAC9-224ENST00000483142 INHBEP58166 350 aa5.32□□□□□ -1.56
HDAC9-224ENST00000483142 C1QTNF8P60827 252 aa5.32□□□□□ -1.56
HDAC9-224ENST00000483142 USP17L24Q0WX57 530 aa5.32□□□□□ -1.56
HDAC9-224ENST00000483142 PABPC4Q13310 644 aaKnown RBP eCLIP5.32□□□□□ -1.56
HDAC9-224ENST00000483142 DGKZQ13574 1117 aa5.32□□□□□ -1.56
HDAC9-224ENST00000483142 PKN1Q16512 942 aa5.32□□□□□ -1.56
HDAC9-224ENST00000483142 CCL15Q16663 113 aa5.32□□□□□ -1.56
HDAC9-224ENST00000483142 FAM110CQ1W6H9 321 aa5.32□□□□□ -1.56
HDAC9-224ENST00000483142 CCDC96Q2M329 555 aa5.32□□□□□ -1.56
HDAC9-224ENST00000483142 C6orf132Q5T0Z8 1188 aa5.32□□□□□ -1.56
HDAC9-224ENST00000483142 TREML2Q5T2D2 321 aa5.32□□□□□ -1.56
HDAC9-224ENST00000483142 SYDE2Q5VT97 1194 aa5.32□□□□□ -1.56
HDAC9-224ENST00000483142 POTEEQ6S8J3 1075 aa5.32□□□□□ -1.56
HDAC9-224ENST00000483142 SYNE3Q6ZMZ3 975 aa5.32□□□□□ -1.56
HDAC9-224ENST00000483142 NFXL1Q6ZNB6 911 aa5.32□□□□□ -1.56
HDAC9-224ENST00000483142 FAM43AQ8N2R8 423 aa5.32□□□□□ -1.56
HDAC9-224ENST00000483142 STAG2Q8N3U4 1231 aa5.32□□□□□ -1.56
HDAC9-224ENST00000483142 SRBD1Q8N5C6 995 aaKnown RBP5.32□□□□□ -1.56
HDAC9-224ENST00000483142 MB21D1Q8N884 522 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms