RNA–Protein interactions for RNA: ENST00000482928.5

TSPAN1-208, Transcript of tetraspanin 1, humanhuman

TSL 2

Gene TSPAN1, Length 844 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-208ENST00000482928 GOLGA6L4A6NEF3 574 aa14.33□□□□□ -0.12
TSPAN1-208ENST00000482928 PRPF40AO75400 957 aaKnown RBP14.33□□□□□ -0.12
TSPAN1-208ENST00000482928 INPP5BP32019 993 aa14.33□□□□□ -0.12
TSPAN1-208ENST00000482928 USP14P54578 494 aa14.33□□□□□ -0.12
TSPAN1-208ENST00000482928 NAPAP54920 295 aa14.33□□□□□ -0.12
TSPAN1-208ENST00000482928 PKN1Q16512 942 aa14.33□□□□□ -0.12
TSPAN1-208ENST00000482928 SKOR2Q2VWA4 1001 aaPredicted RBP14.33□□□□□ -0.12
TSPAN1-208ENST00000482928 DIS3L2Q8IYB7 885 aaKnown RBP14.33□□□□□ -0.12
TSPAN1-208ENST00000482928 SPICE1Q8N0Z3 855 aa14.33□□□□□ -0.12
TSPAN1-208ENST00000482928 FAM177A1Q8N128 213 aaPredicted RBP14.33□□□□□ -0.12
TSPAN1-208ENST00000482928 ACER1Q8TDN7 264 aa14.33□□□□□ -0.12
TSPAN1-208ENST00000482928 PIGSQ96S52 555 aa14.33□□□□□ -0.12
TSPAN1-208ENST00000482928 TMEM106CQ9BVX2 250 aa14.33□□□□□ -0.12
TSPAN1-208ENST00000482928 SCAND2PQ9GZW5 306 aaPredicted RBP14.33□□□□□ -0.12
TSPAN1-208ENST00000482928 CPVLQ9H3G5 476 aa14.33□□□□□ -0.12
TSPAN1-208ENST00000482928 GJB4Q9NTQ9 266 aa14.33□□□□□ -0.12
TSPAN1-208ENST00000482928 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.33□□□□□ -0.12
TSPAN1-208ENST00000482928 DOCK1Q14185 1865 aa14.33□□□□□ -0.12
TSPAN1-208ENST00000482928 PNMA6FA0A0J9YX94 578 aa14.32□□□□□ -0.12
TSPAN1-208ENST00000482928 TMEM232C9JQI7 657 aa14.32□□□□□ -0.12
TSPAN1-208ENST00000482928 UBE2Q2LH0YL09 131 aa14.32□□□□□ -0.12
TSPAN1-208ENST00000482928 SLC16A2P36021 539 aa14.32□□□□□ -0.12
TSPAN1-208ENST00000482928 STAT2P52630 851 aa14.32□□□□□ -0.12
TSPAN1-208ENST00000482928 TRAF1Q13077 416 aa14.32□□□□□ -0.12
TSPAN1-208ENST00000482928 GPR153Q6NV75 609 aa14.32□□□□□ -0.12
TSPAN1-208ENST00000482928 SIAH1Q8IUQ4 282 aa14.32□□□□□ -0.12
TSPAN1-208ENST00000482928 ADGRF4Q8IZF3 695 aa14.32□□□□□ -0.12
TSPAN1-208ENST00000482928 CHURC1Q8WUH1 139 aa14.32□□□□□ -0.12
TSPAN1-208ENST00000482928 DPF3Q92784 378 aa14.32□□□□□ -0.12
TSPAN1-208ENST00000482928 GPKOWQ92917 476 aaPredicted RBP eCLIP14.32□□□□□ -0.12
TSPAN1-208ENST00000482928 ZKSCAN4Q969J2 545 aaPredicted RBP14.32□□□□□ -0.12
TSPAN1-208ENST00000482928 CDCA5Q96FF9 252 aa14.32□□□□□ -0.12
TSPAN1-208ENST00000482928 SPATA32Q96LK8 384 aa14.32□□□□□ -0.12
TSPAN1-208ENST00000482928 FOXP1Q9H334 677 aaPredicted RBP14.32□□□□□ -0.12
TSPAN1-208ENST00000482928 RIOX1Q9H6W3 641 aa14.32□□□□□ -0.12
TSPAN1-208ENST00000482928 ZNF112Q9UJU3 913 aa14.32□□□□□ -0.12
TSPAN1-208ENST00000482928 NOL7Q9UMY1 257 aaKnown RBP14.32□□□□□ -0.12
TSPAN1-208ENST00000482928 A0A1W2PRG0 241 aa14.31□□□□□ -0.12
TSPAN1-208ENST00000482928 USP17L10C9JJH3 530 aa14.31□□□□□ -0.12
TSPAN1-208ENST00000482928 CYTH3O43739 400 aa14.31□□□□□ -0.12
TSPAN1-208ENST00000482928 FKTNO75072 461 aa14.31□□□□□ -0.12
TSPAN1-208ENST00000482928 GNA11P29992 359 aa14.31□□□□□ -0.12
TSPAN1-208ENST00000482928 MAP3K9P80192 1104 aa14.31□□□□□ -0.12
TSPAN1-208ENST00000482928 FAM83BQ5T0W9 1011 aa14.31□□□□□ -0.12
TSPAN1-208ENST00000482928 SYDE2Q5VT97 1194 aa14.31□□□□□ -0.12
TSPAN1-208ENST00000482928 WWC2Q6AWC2 1192 aa14.31□□□□□ -0.12
TSPAN1-208ENST00000482928 TTBK2Q6IQ55 1244 aa14.31□□□□□ -0.12
TSPAN1-208ENST00000482928 GALNT17Q6IS24 598 aa14.31□□□□□ -0.12
TSPAN1-208ENST00000482928 FAM173BQ6P4H8 233 aa14.31□□□□□ -0.12
TSPAN1-208ENST00000482928 ARMC9Q7Z3E5 817 aa14.31□□□□□ -0.12
TSPAN1-208ENST00000482928 FAM160B2Q86V87 743 aa14.31□□□□□ -0.12
TSPAN1-208ENST00000482928 NOSTRINQ8IVI9 506 aa14.31□□□□□ -0.12
TSPAN1-208ENST00000482928 BICD2Q8TD16 824 aa14.31□□□□□ -0.12
TSPAN1-208ENST00000482928 LPAR1Q92633 364 aa14.31□□□□□ -0.12
TSPAN1-208ENST00000482928 NUP88Q99567 741 aaPredicted RBP14.31□□□□□ -0.12
TSPAN1-208ENST00000482928 PHF20Q9BVI0 1012 aa14.31□□□□□ -0.12
TSPAN1-208ENST00000482928 GBA2Q9HCG7 927 aaPredicted RBP14.31□□□□□ -0.12
TSPAN1-208ENST00000482928 C6orf50Q9HD87 102 aa14.31□□□□□ -0.12
TSPAN1-208ENST00000482928 BARHL2Q9NY43 387 aa14.31□□□□□ -0.12
TSPAN1-208ENST00000482928 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.31□□□□□ -0.12
TSPAN1-208ENST00000482928 TRIM17Q9Y577 477 aa14.31□□□□□ -0.12
TSPAN1-208ENST00000482928 CTDP1Q9Y5B0 961 aaPredicted RBP14.31□□□□□ -0.12
TSPAN1-208ENST00000482928 BTBD18B2RXH4 712 aa14.3□□□□□ -0.12
TSPAN1-208ENST00000482928 ZBTB5O15062 677 aa14.3□□□□□ -0.12
TSPAN1-208ENST00000482928 CEBPZQ03701 1054 aaKnown RBP14.3□□□□□ -0.12
TSPAN1-208ENST00000482928 SF3A1Q15459 793 aaKnown RBP14.3□□□□□ -0.12
TSPAN1-208ENST00000482928 CDC37Q16543 378 aaPredicted RBP14.3□□□□□ -0.12
TSPAN1-208ENST00000482928 NOM1Q5C9Z4 860 aaKnown RBP14.3□□□□□ -0.12
TSPAN1-208ENST00000482928 NOL9Q5SY16 702 aaKnown RBP14.3□□□□□ -0.12
TSPAN1-208ENST00000482928 PPP1R18Q6NYC8 613 aa14.3□□□□□ -0.12
TSPAN1-208ENST00000482928 SAMD1Q6SPF0 538 aaPredicted RBP14.3□□□□□ -0.12
TSPAN1-208ENST00000482928 CCDC84Q86UT8 332 aaPredicted RBP14.3□□□□□ -0.12
TSPAN1-208ENST00000482928 C2orf69Q8N8R5 385 aa14.3□□□□□ -0.12
TSPAN1-208ENST00000482928 ZNF280CQ8ND82 737 aa14.3□□□□□ -0.12
TSPAN1-208ENST00000482928 KIAA1683Q9H0B3 1180 aa14.3□□□□□ -0.12
TSPAN1-208ENST00000482928 JMJD4Q9H9V9 463 aa14.3□□□□□ -0.12
TSPAN1-208ENST00000482928 GDPD2Q9HCC8 539 aa14.3□□□□□ -0.12
TSPAN1-208ENST00000482928 MTMR10Q9NXD2 777 aa14.3□□□□□ -0.12
TSPAN1-208ENST00000482928 TMOD4Q9NZQ9 345 aa14.3□□□□□ -0.12
TSPAN1-208ENST00000482928 TFIP11Q9UBB9 837 aaKnown RBP14.3□□□□□ -0.12
TSPAN1-208ENST00000482928 FEM1BQ9UK73 627 aa14.3□□□□□ -0.12
TSPAN1-208ENST00000482928 DDX49Q9Y6V7 483 aaKnown RBP14.3□□□□□ -0.12
TSPAN1-208ENST00000482928 ZHX2Q9Y6X8 837 aa14.3□□□□□ -0.12
TSPAN1-208ENST00000482928 TRIM75PA6NK02 468 aa14.29□□□□□ -0.12
TSPAN1-208ENST00000482928 KIF28PB7ZC32 967 aa14.29□□□□□ -0.12
TSPAN1-208ENST00000482928 STXBP3O00186 592 aa14.29□□□□□ -0.12
TSPAN1-208ENST00000482928 WDR46O15213 610 aaKnown RBP14.29□□□□□ -0.12
TSPAN1-208ENST00000482928 USP2O75604 605 aaPredicted RBP14.29□□□□□ -0.12
TSPAN1-208ENST00000482928 MBD3O95983 291 aa14.29□□□□□ -0.12
TSPAN1-208ENST00000482928 PTPRAP18433 802 aa14.29□□□□□ -0.12
TSPAN1-208ENST00000482928 U2AF2P26368 475 aaKnown RBP eCLIP14.29□□□□□ -0.12
TSPAN1-208ENST00000482928 SPP2Q13103 211 aa14.29□□□□□ -0.12
TSPAN1-208ENST00000482928 MTMR2Q13614 643 aa14.29□□□□□ -0.12
TSPAN1-208ENST00000482928 STK38Q15208 465 aa14.29□□□□□ -0.12
TSPAN1-208ENST00000482928 MYSM1Q5VVJ2 828 aa14.29□□□□□ -0.12
TSPAN1-208ENST00000482928 BLIDQ8IZY5 108 aa14.29□□□□□ -0.12
TSPAN1-208ENST00000482928 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.29□□□□□ -0.12
TSPAN1-208ENST00000482928 CHAMP1Q96JM3 812 aa14.29□□□□□ -0.12
TSPAN1-208ENST00000482928 ANP32EQ9BTT0 268 aa14.29□□□□□ -0.12
TSPAN1-208ENST00000482928 WDR18Q9BV38 432 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms