RNA–Protein interactions for RNA: ENST00000482873.6

DDR1-244, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 2,673 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-244ENST00000482873 FGRP09769 529 aa17.13■□□□□ 0.33
DDR1-244ENST00000482873 TSPY3P0CV98 308 aa17.13■□□□□ 0.33
DDR1-244ENST00000482873 TSPY8P0CW00 308 aa17.13■□□□□ 0.33
DDR1-244ENST00000482873 CALM1P0DP23 149 aa17.13■□□□□ 0.33
DDR1-244ENST00000482873 CALM2P0DP24 149 aa17.13■□□□□ 0.33
DDR1-244ENST00000482873 CALM3P0DP25 149 aa17.13■□□□□ 0.33
DDR1-244ENST00000482873 ERVK-24P63145 666 aa17.13■□□□□ 0.33
DDR1-244ENST00000482873 TUBB2AQ13885 445 aa17.13■□□□□ 0.33
DDR1-244ENST00000482873 HSP90B2PQ58FF3 399 aa17.13■□□□□ 0.33
DDR1-244ENST00000482873 FAM196AQ6ZSG2 479 aa17.13■□□□□ 0.33
DDR1-244ENST00000482873 NAPGQ99747 312 aaPredicted RBP17.13■□□□□ 0.33
DDR1-244ENST00000482873 TUBB2BQ9BVA1 445 aa17.13■□□□□ 0.33
DDR1-244ENST00000482873 ANKRD2Q9GZV1 360 aa17.13■□□□□ 0.33
DDR1-244ENST00000482873 VPS16Q9H269 839 aa17.13■□□□□ 0.33
DDR1-244ENST00000482873 GDAQ9Y2T3 454 aa17.13■□□□□ 0.33
DDR1-244ENST00000482873 ANKRD65E5RJM6 399 aa17.13■□□□□ 0.33
DDR1-244ENST00000482873 RCAN1P53805 252 aa17.13■□□□□ 0.33
DDR1-244ENST00000482873 PFKFB3Q16875 520 aaPredicted RBP17.13■□□□□ 0.33
DDR1-244ENST00000482873 INF2Q27J81 1249 aa17.13■□□□□ 0.33
DDR1-244ENST00000482873 CDKAL1Q5VV42 579 aa17.13■□□□□ 0.33
DDR1-244ENST00000482873 NCAPH2Q6IBW4 605 aa17.13■□□□□ 0.33
DDR1-244ENST00000482873 LRRC31Q6UY01 552 aa17.13■□□□□ 0.33
DDR1-244ENST00000482873 FAM71BQ8TC56 605 aa17.13■□□□□ 0.33
DDR1-244ENST00000482873 ARPP21Q9UBL0 812 aaPredicted RBP17.13■□□□□ 0.33
DDR1-244ENST00000482873 TTF2Q9UNY4 1162 aaKnown RBP17.13■□□□□ 0.33
DDR1-244ENST00000482873 MYH8P13535 1937 aa17.12■□□□□ 0.33
DDR1-244ENST00000482873 PPP1R3GB7ZBB8 358 aa17.12■□□□□ 0.33
DDR1-244ENST00000482873 RNF225M0QZC1 329 aaPredicted RBP17.12■□□□□ 0.33
DDR1-244ENST00000482873 ORC4O43929 436 aa17.12■□□□□ 0.33
DDR1-244ENST00000482873 ARHGAP25P42331 645 aa17.12■□□□□ 0.33
DDR1-244ENST00000482873 ATP2C1P98194 919 aaPredicted RBP17.12■□□□□ 0.33
DDR1-244ENST00000482873 KANK3Q6NY19 840 aa17.12■□□□□ 0.33
DDR1-244ENST00000482873 FAM204AQ9H8W3 233 aa17.12■□□□□ 0.33
DDR1-244ENST00000482873 PES1O00541 588 aaKnown RBP17.12■□□□□ 0.33
DDR1-244ENST00000482873 CYTH3O43739 400 aa17.12■□□□□ 0.33
DDR1-244ENST00000482873 PPP2R5BQ15173 497 aa17.12■□□□□ 0.33
DDR1-244ENST00000482873 C12orf60Q5U649 245 aa17.12■□□□□ 0.33
DDR1-244ENST00000482873 CNGA4Q8IV77 575 aa17.12■□□□□ 0.33
DDR1-244ENST00000482873 TMEM60Q9H2L4 133 aa17.12■□□□□ 0.33
DDR1-244ENST00000482873 PLEKHA4Q9H4M7 779 aa17.12■□□□□ 0.33
DDR1-244ENST00000482873 EIF3CLB5ME19 914 aaKnown RBP17.11■□□□□ 0.33
DDR1-244ENST00000482873 TUBB4BP68371 445 aa17.11■□□□□ 0.33
DDR1-244ENST00000482873 WHAMMP3Q1A5X7 153 aa17.11■□□□□ 0.33
DDR1-244ENST00000482873 EIF3CQ99613 913 aaKnown RBP17.11■□□□□ 0.33
DDR1-244ENST00000482873 CNTNAP4Q9C0A0 1308 aa17.11■□□□□ 0.33
DDR1-244ENST00000482873 TRIM49BA6NDI0 452 aa17.11■□□□□ 0.33
DDR1-244ENST00000482873 FECHP22830 423 aa17.11■□□□□ 0.33
DDR1-244ENST00000482873 AMPD2Q01433 879 aa17.11■□□□□ 0.33
DDR1-244ENST00000482873 BLIDQ8IZY5 108 aa17.11■□□□□ 0.33
DDR1-244ENST00000482873 ZNF444Q8N0Y2 327 aaPredicted RBP17.11■□□□□ 0.33
DDR1-244ENST00000482873 ZNF622Q969S3 477 aaKnown RBP eCLIP17.11■□□□□ 0.33
DDR1-244ENST00000482873 FERMT2Q96AC1 680 aa17.11■□□□□ 0.33
DDR1-244ENST00000482873 F8W031 263 aaPredicted RBP17.1■□□□□ 0.33
DDR1-244ENST00000482873 EIF6P56537 245 aaKnown RBP17.1■□□□□ 0.33
DDR1-244ENST00000482873 SH3RF1Q7Z6J0 888 aa17.1■□□□□ 0.33
DDR1-244ENST00000482873 PACS2Q86VP3 889 aa17.1■□□□□ 0.33
DDR1-244ENST00000482873 GBP3Q9H0R5 595 aa17.1■□□□□ 0.33
DDR1-244ENST00000482873 TAB2Q9NYJ8 693 aa17.1■□□□□ 0.33
DDR1-244ENST00000482873 SLURP2P0DP57 97 aa17.1■□□□□ 0.33
DDR1-244ENST00000482873 MAGEA9P43362 315 aa17.1■□□□□ 0.33
DDR1-244ENST00000482873 USP17L2Q6R6M4 530 aa17.1■□□□□ 0.33
DDR1-244ENST00000482873 UIMC1Q96RL1 719 aa17.1■□□□□ 0.33
DDR1-244ENST00000482873 CTAGE1Q96RT6 745 aa17.1■□□□□ 0.33
DDR1-244ENST00000482873 ABHD10Q9NUJ1 306 aa17.1■□□□□ 0.33
DDR1-244ENST00000482873 MYO6Q9UM54 1294 aa17.1■□□□□ 0.33
DDR1-244ENST00000482873 SRCAPQ6ZRS2 3230 aa17.09■□□□□ 0.33
DDR1-244ENST00000482873 SEMA3EO15041 775 aa17.09■□□□□ 0.33
DDR1-244ENST00000482873 GPSM2P81274 684 aa17.09■□□□□ 0.33
DDR1-244ENST00000482873 FILIP1LQ4L180 1135 aa17.09■□□□□ 0.33
DDR1-244ENST00000482873 TRAPPC3LQ5T215 181 aa17.09■□□□□ 0.33
DDR1-244ENST00000482873 CLEC10AQ8IUN9 316 aa17.09■□□□□ 0.33
DDR1-244ENST00000482873 CNBD1Q8NA66 436 aa17.09■□□□□ 0.33
DDR1-244ENST00000482873 SLF1Q9BQI6 1058 aa17.09■□□□□ 0.33
DDR1-244ENST00000482873 MAD2L2Q9UI95 211 aa17.09■□□□□ 0.33
DDR1-244ENST00000482873 CCDC194A0A1B0GVG4 234 aa17.09■□□□□ 0.33
DDR1-244ENST00000482873 SYF2O95926 243 aaKnown RBP17.09■□□□□ 0.33
DDR1-244ENST00000482873 E2F4Q16254 413 aa17.09■□□□□ 0.33
DDR1-244ENST00000482873 WDR93Q6P2C0 686 aa17.09■□□□□ 0.33
DDR1-244ENST00000482873 TMTC1Q8IUR5 882 aa17.09■□□□□ 0.33
DDR1-244ENST00000482873 TMEM47Q9BQJ4 181 aa17.09■□□□□ 0.33
DDR1-244ENST00000482873 UBA5Q9GZZ9 404 aa17.09■□□□□ 0.33
DDR1-244ENST00000482873 MED4Q9NPJ6 270 aa17.09■□□□□ 0.33
DDR1-244ENST00000482873 MKRN1Q9UHC7 482 aaKnown RBP17.09■□□□□ 0.33
DDR1-244ENST00000482873 RNF40O75150 1001 aa17.08■□□□□ 0.33
DDR1-244ENST00000482873 UFL1O94874 794 aa17.08■□□□□ 0.33
DDR1-244ENST00000482873 KIF5BP33176 963 aa17.08■□□□□ 0.33
DDR1-244ENST00000482873 GOLGA6L1Q8N7Z2 621 aa17.08■□□□□ 0.33
DDR1-244ENST00000482873 CCDC51Q96ER9 411 aa17.08■□□□□ 0.33
DDR1-244ENST00000482873 TRIM10Q9UDY6 481 aa17.08■□□□□ 0.33
DDR1-244ENST00000482873 USP21Q9UK80 565 aa17.08■□□□□ 0.33
DDR1-244ENST00000482873 WNK3Q9BYP7 1800 aa17.08■□□□□ 0.33
DDR1-244ENST00000482873 STAT6P42226 847 aa17.08■□□□□ 0.32
DDR1-244ENST00000482873 BTDP43251 543 aa17.08■□□□□ 0.32
DDR1-244ENST00000482873 PDXDC2PQ6P474 469 aa17.08■□□□□ 0.32
DDR1-244ENST00000482873 CNPY4Q8N129 248 aa17.08■□□□□ 0.32
DDR1-244ENST00000482873 LRRC4BQ9NT99 713 aa17.08■□□□□ 0.32
DDR1-244ENST00000482873 ITIH6Q6UXX5 1313 aa17.08■□□□□ 0.32
DDR1-244ENST00000482873 RIMBP2O15034 1052 aa17.07■□□□□ 0.32
DDR1-244ENST00000482873 N4BP3O15049 544 aa17.07■□□□□ 0.32
DDR1-244ENST00000482873 PICALMQ13492 652 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms