RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 BCAS4Q8TDM0 211 aa16.02■□□□□ 0.16
COL9A2-207ENST00000482722 RTCBQ9Y3I0 505 aaKnown RBP16.02■□□□□ 0.16
COL9A2-207ENST00000482722 ITIH6Q6UXX5 1313 aa16.02■□□□□ 0.16
COL9A2-207ENST00000482722 CCDC196A0A1B0GTZ2 297 aa16.02■□□□□ 0.15
COL9A2-207ENST00000482722 MAP2K2P36507 400 aa16.02■□□□□ 0.15
COL9A2-207ENST00000482722 KANK3Q6NY19 840 aa16.02■□□□□ 0.15
COL9A2-207ENST00000482722 ANKRD20A12PQ8NF67 263 aa16.02■□□□□ 0.15
COL9A2-207ENST00000482722 FOXP1Q9H334 677 aaPredicted RBP16.02■□□□□ 0.15
COL9A2-207ENST00000482722 PPP1R3GB7ZBB8 358 aa16.01■□□□□ 0.15
COL9A2-207ENST00000482722 KRT31Q15323 416 aa16.01■□□□□ 0.15
COL9A2-207ENST00000482722 TTC19Q6DKK2 380 aaPredicted RBP16.01■□□□□ 0.15
COL9A2-207ENST00000482722 PES1O00541 588 aaKnown RBP16.01■□□□□ 0.15
COL9A2-207ENST00000482722 DYNLL1P63167 89 aaKnown RBP16.01■□□□□ 0.15
COL9A2-207ENST00000482722 SHISA4Q96DD7 197 aa16.01■□□□□ 0.15
COL9A2-207ENST00000482722 V9GY48 417 aaPredicted RBP16.01■□□□□ 0.15
COL9A2-207ENST00000482722 GOLGA6BA6NDN3 693 aa16.01■□□□□ 0.15
COL9A2-207ENST00000482722 GNAT2P19087 354 aa16.01■□□□□ 0.15
COL9A2-207ENST00000482722 INPP5BP32019 993 aa16.01■□□□□ 0.15
COL9A2-207ENST00000482722 KRT9P35527 623 aa16.01■□□□□ 0.15
COL9A2-207ENST00000482722 ZNF174Q15697 407 aa16.01■□□□□ 0.15
COL9A2-207ENST00000482722 CAPS2Q9BXY5 557 aa16.01■□□□□ 0.15
COL9A2-207ENST00000482722 RNF41Q9H4P4 317 aaPredicted RBP16.01■□□□□ 0.15
COL9A2-207ENST00000482722 SAMM50Q9Y512 469 aa16.01■□□□□ 0.15
COL9A2-207ENST00000482722 SAR1BQ9Y6B6 198 aa16.01■□□□□ 0.15
COL9A2-207ENST00000482722 GRIN2DO15399 1336 aa16■□□□□ 0.15
COL9A2-207ENST00000482722 MAGEB6P1A0A0J9YX57 407 aa16■□□□□ 0.15
COL9A2-207ENST00000482722 TARSL2A2RTX5 802 aaKnown RBP16■□□□□ 0.15
COL9A2-207ENST00000482722 PSMD14O00487 310 aa16■□□□□ 0.15
COL9A2-207ENST00000482722 RPS6KA4O75676 772 aa16■□□□□ 0.15
COL9A2-207ENST00000482722 TRIM37O94972 964 aa16■□□□□ 0.15
COL9A2-207ENST00000482722 PLEKHA8P1O95397 391 aa16■□□□□ 0.15
COL9A2-207ENST00000482722 RFC4P35249 363 aa16■□□□□ 0.15
COL9A2-207ENST00000482722 PPFIA1Q13136 1202 aa16■□□□□ 0.15
COL9A2-207ENST00000482722 CCNI2Q6ZMN8 369 aaPredicted RBP16■□□□□ 0.15
COL9A2-207ENST00000482722 ESR2Q92731 530 aa16■□□□□ 0.15
COL9A2-207ENST00000482722 EPN1Q9Y6I3 576 aaPredicted RBP16■□□□□ 0.15
COL9A2-207ENST00000482722 EIF3HO15372 352 aaKnown RBP eCLIP16■□□□□ 0.152e-6■■□□□ 14.3
COL9A2-207ENST00000482722 GNGT1P63211 74 aa16■□□□□ 0.15
COL9A2-207ENST00000482722 RRAGBQ5VZM2 374 aa16■□□□□ 0.15
COL9A2-207ENST00000482722 ZNF579Q8NAF0 562 aaKnown RBP16■□□□□ 0.15
COL9A2-207ENST00000482722 NARFQ9UHQ1 456 aa16■□□□□ 0.15
COL9A2-207ENST00000482722 TRIM75PA6NK02 468 aa15.99■□□□□ 0.15
COL9A2-207ENST00000482722 NDUFA10O95299 355 aa15.99■□□□□ 0.15
COL9A2-207ENST00000482722 CCDC172P0C7W6 258 aa15.99■□□□□ 0.15
COL9A2-207ENST00000482722 EEF2KMTQ96G04 330 aa15.99■□□□□ 0.15
COL9A2-207ENST00000482722 FAM84BQ96KN1 310 aaPredicted RBP15.99■□□□□ 0.15
COL9A2-207ENST00000482722 NLRP3Q96P20 1036 aa15.99■□□□□ 0.15
COL9A2-207ENST00000482722 CEP131Q9UPN4 1083 aa15.99■□□□□ 0.15
COL9A2-207ENST00000482722 SHTN1A0MZ66 631 aa15.99■□□□□ 0.15
COL9A2-207ENST00000482722 SEMA3EO15041 775 aa15.99■□□□□ 0.15
COL9A2-207ENST00000482722 RPS8P62241 208 aaKnown RBP15.99■□□□□ 0.15
COL9A2-207ENST00000482722 CLEC4GQ6UXB4 293 aa15.99■□□□□ 0.15
COL9A2-207ENST00000482722 TMTC2Q8N394 836 aa15.99■□□□□ 0.15
COL9A2-207ENST00000482722 ENAHQ8N8S7 591 aaPredicted RBP15.99■□□□□ 0.15
COL9A2-207ENST00000482722 QTRT2Q9H974 415 aaKnown RBP15.99■□□□□ 0.15
COL9A2-207ENST00000482722 IFIT1BQ5T764 474 aaKnown RBP15.98■□□□□ 0.15
COL9A2-207ENST00000482722 POTEDQ86YR6 584 aa15.98■□□□□ 0.15
COL9A2-207ENST00000482722 PDE2AO00408 941 aaPredicted RBP15.98■□□□□ 0.15
COL9A2-207ENST00000482722 XBP1P17861 261 aa15.98■□□□□ 0.15
COL9A2-207ENST00000482722 NFIXQ14938 502 aa15.98■□□□□ 0.15
COL9A2-207ENST00000482722 CNPY4Q8N129 248 aa15.98■□□□□ 0.15
COL9A2-207ENST00000482722 ZNF384Q8TF68 577 aa15.98■□□□□ 0.15
COL9A2-207ENST00000482722 PNPLA7Q6ZV29 1317 aa15.98■□□□□ 0.15
COL9A2-207ENST00000482722 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.97■□□□□ 0.15
COL9A2-207ENST00000482722 ZNF185O15231 689 aa15.97■□□□□ 0.15
COL9A2-207ENST00000482722 KRT2P35908 639 aa15.97■□□□□ 0.15
COL9A2-207ENST00000482722 USP8P40818 1118 aa15.97■□□□□ 0.15
COL9A2-207ENST00000482722 PAPD7Q5XG87 772 aaKnown RBP15.97■□□□□ 0.15
COL9A2-207ENST00000482722 JAKMIP2Q96AA8 810 aa15.97■□□□□ 0.15
COL9A2-207ENST00000482722 CAPN7Q9Y6W3 813 aa15.97■□□□□ 0.15
COL9A2-207ENST00000482722 CHD4Q14839 1912 aa15.97■□□□□ 0.15
COL9A2-207ENST00000482722 NMT2O60551 498 aa15.97■□□□□ 0.15
COL9A2-207ENST00000482722 COPB1P53618 953 aaKnown RBP15.97■□□□□ 0.15
COL9A2-207ENST00000482722 HERVK_113P62684 666 aa15.97■□□□□ 0.15
COL9A2-207ENST00000482722 UBXN1Q04323 297 aa15.97■□□□□ 0.15
COL9A2-207ENST00000482722 CAGE1Q8TC20 777 aa15.97■□□□□ 0.15
COL9A2-207ENST00000482722 ZSCAN10Q96SZ4 725 aaPredicted RBP15.97■□□□□ 0.15
COL9A2-207ENST00000482722 LIMA1Q9UHB6 759 aaKnown RBP15.97■□□□□ 0.15
COL9A2-207ENST00000482722 CEP83Q9Y592 693 aa15.97■□□□□ 0.15
COL9A2-207ENST00000482722 C2orf54Q08AI8 447 aa15.97■□□□□ 0.15
COL9A2-207ENST00000482722 CCDC122Q5T0U0 273 aa15.97■□□□□ 0.15
COL9A2-207ENST00000482722 TRAPPC3LQ5T215 181 aa15.97■□□□□ 0.15
COL9A2-207ENST00000482722 CATIPQ7Z7H3 387 aa15.97■□□□□ 0.15
COL9A2-207ENST00000482722 RRP36Q96EU6 259 aaKnown RBP15.97■□□□□ 0.15
COL9A2-207ENST00000482722 HAUS4Q9H6D7 363 aa15.97■□□□□ 0.15
COL9A2-207ENST00000482722 AATFQ9NY61 560 aaKnown RBP eCLIP15.97■□□□□ 0.15
COL9A2-207ENST00000482722 MRPS25P82663 173 aaKnown RBP15.96■□□□□ 0.15
COL9A2-207ENST00000482722 CKAP4Q07065 602 aaKnown RBP15.96■□□□□ 0.15
COL9A2-207ENST00000482722 TPTE2Q6XPS3 522 aa15.96■□□□□ 0.15
COL9A2-207ENST00000482722 SND1Q7KZF4 910 aaKnown RBP eCLIP15.96■□□□□ 0.157e-7■■■□□ 18
COL9A2-207ENST00000482722 SH3RF1Q7Z6J0 888 aa15.96■□□□□ 0.15
COL9A2-207ENST00000482722 PRPF38AQ8NAV1 312 aaKnown RBP15.96■□□□□ 0.15
COL9A2-207ENST00000482722 AENQ8WTP8 325 aaKnown RBP15.96■□□□□ 0.15
COL9A2-207ENST00000482722 GNL3LQ9NVN8 582 aaKnown RBP15.96■□□□□ 0.15
COL9A2-207ENST00000482722 BTAF1O14981 1849 aa15.96■□□□□ 0.15
COL9A2-207ENST00000482722 MYO1FO00160 1098 aa15.96■□□□□ 0.14
COL9A2-207ENST00000482722 PRDX5P30044 214 aa15.96■□□□□ 0.14
COL9A2-207ENST00000482722 SF3B3Q15393 1217 aaKnown RBP15.96■□□□□ 0.14
COL9A2-207ENST00000482722 SEC23AQ15436 765 aa15.96■□□□□ 0.14
COL9A2-207ENST00000482722 PKN1Q16512 942 aa15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms