RNA–Protein interactions for RNA: ENST00000482541.2

CCNC-204, Transcript of cyclin C, humanhuman

TSL 1 (best) BASIC

Gene CCNC, Length 1,704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-204ENST00000482541 NUCB1Q02818 461 aa9.19□□□□□ -0.94
CCNC-204ENST00000482541 PDE4DQ08499 809 aa9.19□□□□□ -0.94
CCNC-204ENST00000482541 KCTD2Q14681 263 aa9.19□□□□□ -0.94
CCNC-204ENST00000482541 CCDC129Q6ZRS4 1044 aa9.19□□□□□ -0.94
CCNC-204ENST00000482541 CHD1LQ86WJ1 897 aa9.19□□□□□ -0.94
CCNC-204ENST00000482541 MAML3Q96JK9 1138 aa9.19□□□□□ -0.94
CCNC-204ENST00000482541 TEX13BQ9BXU2 312 aa9.19□□□□□ -0.94
CCNC-204ENST00000482541 PCDH10Q9P2E7 1040 aa9.19□□□□□ -0.94
CCNC-204ENST00000482541 FEM1BQ9UK73 627 aa9.19□□□□□ -0.94
CCNC-204ENST00000482541 MYH4Q9Y623 1939 aa9.19□□□□□ -0.94
CCNC-204ENST00000482541 COL11A1P12107 1806 aaPredicted RBP9.19□□□□□ -0.94
CCNC-204ENST00000482541 TSPY2A6NKD2 308 aa9.19□□□□□ -0.94
CCNC-204ENST00000482541 TRIM6-TRIM34B2RNG4 842 aa9.19□□□□□ -0.94
CCNC-204ENST00000482541 ZBED4O75132 1171 aa9.19□□□□□ -0.94
CCNC-204ENST00000482541 FECHP22830 423 aa9.19□□□□□ -0.94
CCNC-204ENST00000482541 OAZ1P54368 228 aa9.19□□□□□ -0.94
CCNC-204ENST00000482541 PTGDRQ13258 359 aa9.19□□□□□ -0.94
CCNC-204ENST00000482541 FAM47AQ5JRC9 791 aa9.19□□□□□ -0.94
CCNC-204ENST00000482541 B4GALNT3Q6L9W6 998 aa9.19□□□□□ -0.94
CCNC-204ENST00000482541 EXOC6Q8TAG9 804 aa9.19□□□□□ -0.94
CCNC-204ENST00000482541 MMP19Q99542 508 aa9.19□□□□□ -0.94
CCNC-204ENST00000482541 NUP88Q99567 741 aaPredicted RBP9.19□□□□□ -0.94
CCNC-204ENST00000482541 NRBP1Q9UHY1 535 aa9.19□□□□□ -0.94
CCNC-204ENST00000482541 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.19□□□□□ -0.94
CCNC-204ENST00000482541 A0A1W2PPC1 479 aa9.18□□□□□ -0.94
CCNC-204ENST00000482541 SEPT4O43236 478 aa9.18□□□□□ -0.94
CCNC-204ENST00000482541 ORC4O43929 436 aa9.18□□□□□ -0.94
CCNC-204ENST00000482541 PLA2G6O60733 806 aa9.18□□□□□ -0.94
CCNC-204ENST00000482541 FGAP02671 866 aa9.18□□□□□ -0.94
CCNC-204ENST00000482541 BMP3P12645 472 aa9.18□□□□□ -0.94
CCNC-204ENST00000482541 NOVP48745 357 aa9.18□□□□□ -0.94
CCNC-204ENST00000482541 FXR1P51114 621 aaKnown RBP eCLIP9.18□□□□□ -0.94
CCNC-204ENST00000482541 MFAP1P55081 439 aaKnown RBP9.18□□□□□ -0.94
CCNC-204ENST00000482541 CTDSPL2Q05D32 466 aa9.18□□□□□ -0.94
CCNC-204ENST00000482541 ZNF792Q3KQV3 632 aa9.18□□□□□ -0.94
CCNC-204ENST00000482541 VPS53Q5VIR6 699 aa9.18□□□□□ -0.94
CCNC-204ENST00000482541 SLFN13Q68D06 897 aa9.18□□□□□ -0.94
CCNC-204ENST00000482541 PLEKHM2Q8IWE5 1019 aa9.18□□□□□ -0.94
CCNC-204ENST00000482541 ARRDC4Q8NCT1 418 aa9.18□□□□□ -0.94
CCNC-204ENST00000482541 TRPV1Q8NER1 839 aa9.18□□□□□ -0.94
CCNC-204ENST00000482541 CHURC1Q8WUH1 139 aa9.18□□□□□ -0.94
CCNC-204ENST00000482541 RILPL2Q969X0 211 aa9.18□□□□□ -0.94
CCNC-204ENST00000482541 GMCL1Q96IK5 515 aa9.18□□□□□ -0.94
CCNC-204ENST00000482541 FAM227BQ96M60 508 aa9.18□□□□□ -0.94
CCNC-204ENST00000482541 PRO3102Q9H379 93 aa9.18□□□□□ -0.94
CCNC-204ENST00000482541 RBM27Q9P2N5 1060 aaKnown RBP9.18□□□□□ -0.94
CCNC-204ENST00000482541 CTDP1Q9Y5B0 961 aaPredicted RBP9.18□□□□□ -0.94
CCNC-204ENST00000482541 PFASO15067 1338 aa9.17□□□□□ -0.94
CCNC-204ENST00000482541 A0A0D9SFI3 127 aa9.17□□□□□ -0.94
CCNC-204ENST00000482541 DNM1LO00429 736 aa9.17□□□□□ -0.94
CCNC-204ENST00000482541 HSPD1P10809 573 aaKnown RBP9.17□□□□□ -0.94
CCNC-204ENST00000482541 PCP11498 1178 aaKnown RBP9.17□□□□□ -0.94
CCNC-204ENST00000482541 SDSP20132 328 aa9.17□□□□□ -0.94
CCNC-204ENST00000482541 STAT2P52630 851 aa9.17□□□□□ -0.94
CCNC-204ENST00000482541 SNRNP48Q6IEG0 339 aaKnown RBP9.17□□□□□ -0.94
CCNC-204ENST00000482541 FAM160B2Q86V87 743 aa9.17□□□□□ -0.94
CCNC-204ENST00000482541 LRRC47Q8N1G4 583 aaKnown RBP9.17□□□□□ -0.94
CCNC-204ENST00000482541 MSL3Q8N5Y2 521 aaKnown RBP9.17□□□□□ -0.94
CCNC-204ENST00000482541 KIFC2Q96AC6 838 aa9.17□□□□□ -0.94
CCNC-204ENST00000482541 DDX11Q96FC9 970 aa9.17□□□□□ -0.94
CCNC-204ENST00000482541 TINF2Q9BSI4 451 aa9.17□□□□□ -0.94
CCNC-204ENST00000482541 KDM4CQ9H3R0 1056 aa9.17□□□□□ -0.94
CCNC-204ENST00000482541 SLC38A10Q9HBR0 1119 aa9.17□□□□□ -0.94
CCNC-204ENST00000482541 IL17RBQ9NRM6 502 aa9.17□□□□□ -0.94
CCNC-204ENST00000482541 FBXO40Q9UH90 709 aa9.17□□□□□ -0.94
CCNC-204ENST00000482541 STX8Q9UNK0 236 aa9.17□□□□□ -0.94
CCNC-204ENST00000482541 RIPK3Q9Y572 518 aa9.17□□□□□ -0.94
CCNC-204ENST00000482541 SUPT16HQ9Y5B9 1047 aaKnown RBP9.17□□□□□ -0.94
CCNC-204ENST00000482541 ZMYM6O95789 1325 aa9.17□□□□□ -0.94
CCNC-204ENST00000482541 RANBP6O60518 1105 aaKnown RBP9.17□□□□□ -0.94
CCNC-204ENST00000482541 BMP8BP34820 402 aa9.17□□□□□ -0.94
CCNC-204ENST00000482541 SLC1A4P43007 532 aa9.17□□□□□ -0.94
CCNC-204ENST00000482541 RCSD1Q6JBY9 416 aa9.17□□□□□ -0.94
CCNC-204ENST00000482541 CPXCR1Q8N123 301 aa9.17□□□□□ -0.94
CCNC-204ENST00000482541 CHST13Q8NET6 341 aa9.17□□□□□ -0.94
CCNC-204ENST00000482541 STAG1Q8WVM7 1258 aa9.17□□□□□ -0.94
CCNC-204ENST00000482541 TTC14Q96N46 770 aa9.17□□□□□ -0.94
CCNC-204ENST00000482541 SENP6Q9GZR1 1112 aaPredicted RBP9.17□□□□□ -0.94
CCNC-204ENST00000482541 INCENPQ9NQS7 918 aa9.17□□□□□ -0.94
CCNC-204ENST00000482541 TCP11L1Q9NUJ3 509 aa9.17□□□□□ -0.94
CCNC-204ENST00000482541 ALPK3Q96L96 1907 aa9.16□□□□□ -0.94
CCNC-204ENST00000482541 CCDC171Q6TFL3 1326 aa9.16□□□□□ -0.94
CCNC-204ENST00000482541 FRMPD3Q5JV73 1810 aa9.16□□□□□ -0.94
CCNC-204ENST00000482541 DNAJC25-GNG10A0A024R161 153 aa9.16□□□□□ -0.94
CCNC-204ENST00000482541 TMEM232C9JQI7 657 aa9.16□□□□□ -0.94
CCNC-204ENST00000482541 HIP1O00291 1037 aa9.16□□□□□ -0.94
CCNC-204ENST00000482541 PGK2P07205 417 aa9.16□□□□□ -0.94
CCNC-204ENST00000482541 MCCP23508 829 aa9.16□□□□□ -0.94
CCNC-204ENST00000482541 NT5C2P49902 561 aa9.16□□□□□ -0.94
CCNC-204ENST00000482541 NMIQ13287 307 aaPredicted RBP9.16□□□□□ -0.94
CCNC-204ENST00000482541 PRAMEF19Q5SWL8 479 aa9.16□□□□□ -0.94
CCNC-204ENST00000482541 MAMDC4Q6UXC1 1216 aa9.16□□□□□ -0.94
CCNC-204ENST00000482541 C7orf61Q8IZ16 206 aa9.16□□□□□ -0.94
CCNC-204ENST00000482541 EPAS1Q99814 870 aa9.16□□□□□ -0.94
CCNC-204ENST00000482541 GDF15Q99988 308 aa9.16□□□□□ -0.94
CCNC-204ENST00000482541 RAVER2Q9HCJ3 691 aaKnown RBP9.16□□□□□ -0.94
CCNC-204ENST00000482541 PCDHGA10Q9Y5H3 936 aa9.16□□□□□ -0.94
CCNC-204ENST00000482541 PLXNA1Q9UIW2 1896 aa9.15□□□□□ -0.94
CCNC-204ENST00000482541 NMT2O60551 498 aa9.15□□□□□ -0.94
CCNC-204ENST00000482541 LRRC26Q2I0M4 334 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms