RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 IRS2Q9Y4H2 1338 aa16.79■□□□□ 0.28
ATG4B-220ENST00000482507 N4BP3O15049 544 aa16.78■□□□□ 0.28
ATG4B-220ENST00000482507 USP17L8P0C7I0 530 aa16.78■□□□□ 0.28
ATG4B-220ENST00000482507 TRAPPC10P48553 1259 aa16.78■□□□□ 0.28
ATG4B-220ENST00000482507 COPB1P53618 953 aaKnown RBP16.78■□□□□ 0.28
ATG4B-220ENST00000482507 SLC35G1Q2M3R5 365 aa16.78■□□□□ 0.28
ATG4B-220ENST00000482507 ZNF569Q5MCW4 686 aa16.78■□□□□ 0.28
ATG4B-220ENST00000482507 STAG2Q8N3U4 1231 aa16.78■□□□□ 0.28
ATG4B-220ENST00000482507 NELFBQ8WX92 580 aa16.78■□□□□ 0.28
ATG4B-220ENST00000482507 GOLGA1Q92805 767 aa16.78■□□□□ 0.28
ATG4B-220ENST00000482507 CNKSR1Q969H4 720 aa16.78■□□□□ 0.28
ATG4B-220ENST00000482507 PUF60Q9UHX1 559 aaKnown RBP16.78■□□□□ 0.28
ATG4B-220ENST00000482507 KIAA1551Q9HCM1 1747 aa16.78■□□□□ 0.28
ATG4B-220ENST00000482507 C10orf71Q711Q0 1435 aa16.78■□□□□ 0.28
ATG4B-220ENST00000482507 PAK1Q13153 545 aa16.78■□□□□ 0.28
ATG4B-220ENST00000482507 IRF2BP1Q8IU81 584 aa16.78■□□□□ 0.28
ATG4B-220ENST00000482507 CNGA4Q8IV77 575 aa16.78■□□□□ 0.28
ATG4B-220ENST00000482507 CRNKL1Q9BZJ0 848 aaKnown RBP16.78■□□□□ 0.28
ATG4B-220ENST00000482507 ZCCHC17Q9NP64 241 aaKnown RBP16.78■□□□□ 0.28
ATG4B-220ENST00000482507 IL17RBQ9NRM6 502 aa16.78■□□□□ 0.28
ATG4B-220ENST00000482507 ABHD10Q9NUJ1 306 aa16.78■□□□□ 0.28
ATG4B-220ENST00000482507 COL11A2P13942 1736 aaPredicted RBP16.78■□□□□ 0.28
ATG4B-220ENST00000482507 ERICH4A6NGS2 130 aa16.77■□□□□ 0.28
ATG4B-220ENST00000482507 TSPY2A6NKD2 308 aa16.77■□□□□ 0.28
ATG4B-220ENST00000482507 PP2D1A8MPX8 630 aa16.77■□□□□ 0.28
ATG4B-220ENST00000482507 POLR3GO15318 223 aaPredicted RBP16.77■□□□□ 0.28
ATG4B-220ENST00000482507 RPN1P04843 607 aaKnown RBP16.77■□□□□ 0.28
ATG4B-220ENST00000482507 ATP2B4P23634 1241 aa16.77■□□□□ 0.28
ATG4B-220ENST00000482507 PRCPP42785 496 aa16.77■□□□□ 0.28
ATG4B-220ENST00000482507 TCP11X2Q5H9J9 407 aa16.77■□□□□ 0.28
ATG4B-220ENST00000482507 C7orf43Q8WVR3 580 aa16.77■□□□□ 0.28
ATG4B-220ENST00000482507 TMX4Q9H1E5 349 aaPredicted RBP16.77■□□□□ 0.28
ATG4B-220ENST00000482507 PODXL2Q9NZ53 605 aa16.77■□□□□ 0.28
ATG4B-220ENST00000482507 LAMB1P07942 1786 aa16.77■□□□□ 0.27
ATG4B-220ENST00000482507 TRIM49BA6NDI0 452 aa16.77■□□□□ 0.27
ATG4B-220ENST00000482507 KCNJ18B7U540 433 aa16.77■□□□□ 0.27
ATG4B-220ENST00000482507 TXLNAP40222 546 aa16.77■□□□□ 0.27
ATG4B-220ENST00000482507 ARHGAP25P42331 645 aa16.77■□□□□ 0.27
ATG4B-220ENST00000482507 CHMP4BP1P59074 171 aa16.77■□□□□ 0.27
ATG4B-220ENST00000482507 KCNJ12Q14500 433 aa16.77■□□□□ 0.27
ATG4B-220ENST00000482507 DOK7Q18PE1 504 aa16.77■□□□□ 0.27
ATG4B-220ENST00000482507 NAALADL2Q58DX5 795 aa16.77■□□□□ 0.27
ATG4B-220ENST00000482507 ZNF658Q5TYW1 1059 aaPredicted RBP16.77■□□□□ 0.27
ATG4B-220ENST00000482507 SRGAP1Q7Z6B7 1085 aa16.77■□□□□ 0.27
ATG4B-220ENST00000482507 SLC35F6Q8N357 371 aa16.77■□□□□ 0.27
ATG4B-220ENST00000482507 TTLL6Q8N841 843 aa16.77■□□□□ 0.27
ATG4B-220ENST00000482507 FUT8Q9BYC5 575 aa16.77■□□□□ 0.27
ATG4B-220ENST00000482507 ANKZF1Q9H8Y5 726 aa16.77■□□□□ 0.27
ATG4B-220ENST00000482507 ATP8A2Q9NTI2 1148 aa16.77■□□□□ 0.27
ATG4B-220ENST00000482507 KIF5CO60282 957 aa16.76■□□□□ 0.27
ATG4B-220ENST00000482507 PMS1P54277 932 aaKnown RBP16.76■□□□□ 0.27
ATG4B-220ENST00000482507 SBK1Q52WX2 424 aa16.76■□□□□ 0.27
ATG4B-220ENST00000482507 CREBRFQ8IUR6 639 aa16.76■□□□□ 0.27
ATG4B-220ENST00000482507 BLIDQ8IZY5 108 aa16.76■□□□□ 0.27
ATG4B-220ENST00000482507 LRRC15Q8TF66 581 aa16.76■□□□□ 0.27
ATG4B-220ENST00000482507 CDC23Q9UJX2 597 aa16.76■□□□□ 0.27
ATG4B-220ENST00000482507 M0R2N6 131 aa16.76■□□□□ 0.27
ATG4B-220ENST00000482507 ATP8B1O43520 1251 aa16.76■□□□□ 0.27
ATG4B-220ENST00000482507 CYP2C19P33261 490 aa16.76■□□□□ 0.27
ATG4B-220ENST00000482507 CCDC51Q96ER9 411 aa16.76■□□□□ 0.27
ATG4B-220ENST00000482507 DYNLL2Q96FJ2 89 aa16.76■□□□□ 0.27
ATG4B-220ENST00000482507 TMEM60Q9H2L4 133 aa16.76■□□□□ 0.27
ATG4B-220ENST00000482507 TMC4Q7Z404 712 aa16.75■□□□□ 0.27
ATG4B-220ENST00000482507 MCM9Q9NXL9 1143 aa16.75■□□□□ 0.27
ATG4B-220ENST00000482507 ARPP21Q9UBL0 812 aaPredicted RBP16.75■□□□□ 0.27
ATG4B-220ENST00000482507 MYH8P13535 1937 aa16.75■□□□□ 0.27
ATG4B-220ENST00000482507 LONP1P36776 959 aaKnown RBP16.75■□□□□ 0.27
ATG4B-220ENST00000482507 TFAP4Q01664 338 aa16.75■□□□□ 0.27
ATG4B-220ENST00000482507 ARL6IP4Q66PJ3 421 aaKnown RBP16.75■□□□□ 0.27
ATG4B-220ENST00000482507 TMTC1Q8IUR5 882 aa16.75■□□□□ 0.27
ATG4B-220ENST00000482507 NLGN2Q8NFZ4 835 aa16.75■□□□□ 0.27
ATG4B-220ENST00000482507 PNKPQ96T60 521 aa16.75■□□□□ 0.27
ATG4B-220ENST00000482507 NUP88Q99567 741 aaPredicted RBP16.75■□□□□ 0.27
ATG4B-220ENST00000482507 CHP1Q99653 195 aa16.75■□□□□ 0.27
ATG4B-220ENST00000482507 ARFGAP3Q9NP61 516 aa16.75■□□□□ 0.27
ATG4B-220ENST00000482507 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.75■□□□□ 0.27
ATG4B-220ENST00000482507 REXO2Q9Y3B8 237 aaKnown RBP16.75■□□□□ 0.27
ATG4B-220ENST00000482507 SLF1Q9BQI6 1058 aa16.74■□□□□ 0.27
ATG4B-220ENST00000482507 ZC3H12CQ9C0D7 883 aaKnown RBP16.74■□□□□ 0.27
ATG4B-220ENST00000482507 CD209Q9NNX6 404 aa16.74■□□□□ 0.27
ATG4B-220ENST00000482507 KCNQ5Q9NR82 932 aa16.74■□□□□ 0.27
ATG4B-220ENST00000482507 DISC1Q9NRI5 854 aa16.74■□□□□ 0.27
ATG4B-220ENST00000482507 MKRN1Q9UHC7 482 aaKnown RBP16.74■□□□□ 0.27
ATG4B-220ENST00000482507 PCDHA4Q9UN74 947 aa16.74■□□□□ 0.27
ATG4B-220ENST00000482507 SLX4Q8IY92 1834 aa16.74■□□□□ 0.27
ATG4B-220ENST00000482507 PDS5AQ29RF7 1337 aaKnown RBP16.74■□□□□ 0.27
ATG4B-220ENST00000482507 OAS2P29728 719 aaKnown RBP16.74■□□□□ 0.27
ATG4B-220ENST00000482507 STAT6P42226 847 aa16.74■□□□□ 0.27
ATG4B-220ENST00000482507 LONRF2Q1L5Z9 754 aa16.74■□□□□ 0.27
ATG4B-220ENST00000482507 ADSSL1Q8N142 457 aa16.74■□□□□ 0.27
ATG4B-220ENST00000482507 PNMA1Q8ND90 353 aa16.74■□□□□ 0.27
ATG4B-220ENST00000482507 PLIN2Q99541 437 aa16.74■□□□□ 0.27
ATG4B-220ENST00000482507 TRIM10Q9UDY6 481 aa16.74■□□□□ 0.27
ATG4B-220ENST00000482507 TTF2Q9UNY4 1162 aaKnown RBP16.74■□□□□ 0.27
ATG4B-220ENST00000482507 USP17L3A6NCW0 530 aa16.73■□□□□ 0.27
ATG4B-220ENST00000482507 USP17L4A6NCW7 530 aa16.73■□□□□ 0.27
ATG4B-220ENST00000482507 CYTH3O43739 400 aa16.73■□□□□ 0.27
ATG4B-220ENST00000482507 KLRC4O43908 158 aa16.73■□□□□ 0.27
ATG4B-220ENST00000482507 KRT9P35527 623 aa16.73■□□□□ 0.27
ATG4B-220ENST00000482507 SMC1AQ14683 1233 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms