RNA–Protein interactions for RNA: ENST00000482143.5

TSPAN1-207, Transcript of tetraspanin 1, humanhuman

TSL 5

Gene TSPAN1, Length 827 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-207ENST00000482143 XIRP2A4UGR9 3374 aa15.48■□□□□ 0.07
TSPAN1-207ENST00000482143 SNAI1O95863 264 aaPredicted RBP15.47■□□□□ 0.07
TSPAN1-207ENST00000482143 CCL23P55773 120 aa15.47■□□□□ 0.07
TSPAN1-207ENST00000482143 CCDC144BQ3MJ40 725 aa15.47■□□□□ 0.07
TSPAN1-207ENST00000482143 FAM83BQ5T0W9 1011 aa15.47■□□□□ 0.07
TSPAN1-207ENST00000482143 RPUSD2Q8IZ73 545 aaKnown RBP15.47■□□□□ 0.07
TSPAN1-207ENST00000482143 TEX13BQ9BXU2 312 aa15.47■□□□□ 0.07
TSPAN1-207ENST00000482143 ARMT1Q9H993 441 aa15.47■□□□□ 0.07
TSPAN1-207ENST00000482143 ZNF214Q9UL59 606 aaPredicted RBP15.47■□□□□ 0.07
TSPAN1-207ENST00000482143 ADAMTS5Q9UNA0 930 aa15.47■□□□□ 0.07
TSPAN1-207ENST00000482143 PCDHA11Q9Y5I1 949 aa15.47■□□□□ 0.07
TSPAN1-207ENST00000482143 PRKAB2O43741 272 aa15.46■□□□□ 0.07
TSPAN1-207ENST00000482143 RAB11FIP3O75154 756 aa15.46■□□□□ 0.07
TSPAN1-207ENST00000482143 CHGBP05060 677 aa15.46■□□□□ 0.07
TSPAN1-207ENST00000482143 EEF2P13639 858 aaKnown RBP15.46■□□□□ 0.07
TSPAN1-207ENST00000482143 MYOGP15173 224 aa15.46■□□□□ 0.07
TSPAN1-207ENST00000482143 ATP5JP18859 108 aa15.46■□□□□ 0.07
TSPAN1-207ENST00000482143 GJA9P57773 515 aa15.46■□□□□ 0.07
TSPAN1-207ENST00000482143 C12orf60Q5U649 245 aa15.46■□□□□ 0.07
TSPAN1-207ENST00000482143 CCDC17Q96LX7 622 aa15.46■□□□□ 0.07
TSPAN1-207ENST00000482143 DNAJC2Q99543 621 aaKnown RBP15.46■□□□□ 0.07
TSPAN1-207ENST00000482143 ABHD16BQ9H3Z7 469 aa15.46■□□□□ 0.07
TSPAN1-207ENST00000482143 ATP8A2Q9NTI2 1148 aa15.46■□□□□ 0.07
TSPAN1-207ENST00000482143 PAG1Q9NWQ8 432 aa15.46■□□□□ 0.07
TSPAN1-207ENST00000482143 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.46■□□□□ 0.07
TSPAN1-207ENST00000482143 DDX19BQ9UMR2 479 aa15.46■□□□□ 0.07
TSPAN1-207ENST00000482143 COG5Q9UP83 839 aa15.46■□□□□ 0.07
TSPAN1-207ENST00000482143 HMMRO75330 724 aa15.45■□□□□ 0.06
TSPAN1-207ENST00000482143 MBD4O95243 580 aa15.45■□□□□ 0.06
TSPAN1-207ENST00000482143 CD4P01730 458 aa15.45■□□□□ 0.06
TSPAN1-207ENST00000482143 IFIT2P09913 472 aaKnown RBP15.45■□□□□ 0.06
TSPAN1-207ENST00000482143 MS4A1P11836 297 aa15.45■□□□□ 0.06
TSPAN1-207ENST00000482143 ATP2A2P16615 1042 aaKnown RBP15.45■□□□□ 0.06
TSPAN1-207ENST00000482143 MAMDC4Q6UXC1 1216 aa15.45■□□□□ 0.06
TSPAN1-207ENST00000482143 CPXCR1Q8N123 301 aa15.45■□□□□ 0.06
TSPAN1-207ENST00000482143 ANKRD35Q8N283 1001 aa15.45■□□□□ 0.06
TSPAN1-207ENST00000482143 DDRGK1Q96HY6 314 aa15.45■□□□□ 0.06
TSPAN1-207ENST00000482143 HAUS7Q99871 368 aa15.45■□□□□ 0.06
TSPAN1-207ENST00000482143 UPF3AQ9H1J1 476 aaKnown RBP15.45■□□□□ 0.06
TSPAN1-207ENST00000482143 CERS4Q9HA82 394 aa15.45■□□□□ 0.06
TSPAN1-207ENST00000482143 CHD7Q9P2D1 2997 aa15.45■□□□□ 0.06
TSPAN1-207ENST00000482143 PRRC2BQ5JSZ5 2229 aaKnown RBP15.45■□□□□ 0.06
TSPAN1-207ENST00000482143 UMODL1Q5DID0 1318 aa15.44■□□□□ 0.06
TSPAN1-207ENST00000482143 FAM86C2PA6NEL3 165 aa15.44■□□□□ 0.06
TSPAN1-207ENST00000482143 BEX3Q00994 111 aa15.44■□□□□ 0.06
TSPAN1-207ENST00000482143 UBE3CQ15386 1083 aa15.44■□□□□ 0.06
TSPAN1-207ENST00000482143 TMEM67Q5HYA8 995 aa15.44■□□□□ 0.06
TSPAN1-207ENST00000482143 CXCL17Q6UXB2 119 aa15.44■□□□□ 0.06
TSPAN1-207ENST00000482143 C16orf86Q6ZW13 317 aa15.44■□□□□ 0.06
TSPAN1-207ENST00000482143 ZNF467Q7Z7K2 595 aaPredicted RBP15.44■□□□□ 0.06
TSPAN1-207ENST00000482143 ALYREFQ86V81 257 aaKnown RBP15.44■□□□□ 0.06
TSPAN1-207ENST00000482143 SLF1Q9BQI6 1058 aa15.44■□□□□ 0.06
TSPAN1-207ENST00000482143 BOLA2Q9H3K6 86 aa15.44■□□□□ 0.06
TSPAN1-207ENST00000482143 KANSL2Q9H9L4 492 aa15.44■□□□□ 0.06
TSPAN1-207ENST00000482143 COG6Q9Y2V7 657 aa15.44■□□□□ 0.06
TSPAN1-207ENST00000482143 SCN5AQ14524 2016 aa15.43■□□□□ 0.06
TSPAN1-207ENST00000482143 CYP2D7A0A087X1C5 515 aa15.43■□□□□ 0.06
TSPAN1-207ENST00000482143 RFXAPO00287 272 aa15.43■□□□□ 0.06
TSPAN1-207ENST00000482143 ADCY6O43306 1168 aa15.43■□□□□ 0.06
TSPAN1-207ENST00000482143 CABYRO75952 493 aa15.43■□□□□ 0.06
TSPAN1-207ENST00000482143 CDK8P49336 464 aa15.43■□□□□ 0.06
TSPAN1-207ENST00000482143 ARMCX2Q7L311 632 aa15.43■□□□□ 0.06
TSPAN1-207ENST00000482143 MTCH2Q9Y6C9 303 aa15.43■□□□□ 0.06
TSPAN1-207ENST00000482143 COL4A4P53420 1690 aaPredicted RBP15.43■□□□□ 0.06
TSPAN1-207ENST00000482143 TRANK1O15050 2925 aa15.43■□□□□ 0.06
TSPAN1-207ENST00000482143 DNAJC25-GNG10A0A024R161 153 aa15.42■□□□□ 0.06
TSPAN1-207ENST00000482143 USP17L12C9JPN9 530 aa15.42■□□□□ 0.06
TSPAN1-207ENST00000482143 USP17L21D6R901 530 aa15.42■□□□□ 0.06
TSPAN1-207ENST00000482143 ZEB2O60315 1214 aa15.42■□□□□ 0.06
TSPAN1-207ENST00000482143 ZBED4O75132 1171 aa15.42■□□□□ 0.06
TSPAN1-207ENST00000482143 CA3P07451 260 aa15.42■□□□□ 0.06
TSPAN1-207ENST00000482143 TNFAIP2Q03169 654 aa15.42■□□□□ 0.06
TSPAN1-207ENST00000482143 ITGA7Q13683 1181 aa15.42■□□□□ 0.06
TSPAN1-207ENST00000482143 REPS2Q8NFH8 660 aa15.42■□□□□ 0.06
TSPAN1-207ENST00000482143 HLA-CQ95604 372 aa15.42■□□□□ 0.06
TSPAN1-207ENST00000482143 NUP88Q99567 741 aaPredicted RBP15.42■□□□□ 0.06
TSPAN1-207ENST00000482143 NOC4LQ9BVI4 516 aaKnown RBP15.42■□□□□ 0.06
TSPAN1-207ENST00000482143 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.42■□□□□ 0.06
TSPAN1-207ENST00000482143 AP5M1Q9H0R1 490 aa15.42■□□□□ 0.06
TSPAN1-207ENST00000482143 GPR37L1O60883 481 aa15.41■□□□□ 0.06
TSPAN1-207ENST00000482143 CTR9Q6PD62 1173 aa15.41■□□□□ 0.06
TSPAN1-207ENST00000482143 CCDC144CPQ8IYA2 1237 aa15.41■□□□□ 0.06
TSPAN1-207ENST00000482143 ARNTL2Q8WYA1 636 aa15.41■□□□□ 0.06
TSPAN1-207ENST00000482143 SCLYQ96I15 445 aa15.41■□□□□ 0.06
TSPAN1-207ENST00000482143 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.41■□□□□ 0.06
TSPAN1-207ENST00000482143 PUS7LQ9H0K6 701 aaKnown RBP15.41■□□□□ 0.06
TSPAN1-207ENST00000482143 TRPV6Q9H1D0 765 aa15.41■□□□□ 0.06
TSPAN1-207ENST00000482143 FBXO40Q9UH90 709 aa15.41■□□□□ 0.06
TSPAN1-207ENST00000482143 RIPK3Q9Y572 518 aa15.41■□□□□ 0.06
TSPAN1-207ENST00000482143 TLL1O43897 1013 aa15.4■□□□□ 0.06
TSPAN1-207ENST00000482143 B4GALT4O60513 344 aa15.4■□□□□ 0.06
TSPAN1-207ENST00000482143 PFKMP08237 780 aa15.4■□□□□ 0.06
TSPAN1-207ENST00000482143 ACTN1P12814 892 aa15.4■□□□□ 0.06
TSPAN1-207ENST00000482143 FSCN1Q16658 493 aaKnown RBP15.4■□□□□ 0.06
TSPAN1-207ENST00000482143 DEFB128Q7Z7B8 93 aa15.4■□□□□ 0.06
TSPAN1-207ENST00000482143 TLK2Q86UE8 772 aa15.4■□□□□ 0.06
TSPAN1-207ENST00000482143 PRPF38AQ8NAV1 312 aaKnown RBP15.4■□□□□ 0.06
TSPAN1-207ENST00000482143 KIFC2Q96AC6 838 aa15.4■□□□□ 0.06
TSPAN1-207ENST00000482143 SEZ6LQ9BYH1 1024 aa15.4■□□□□ 0.06
TSPAN1-207ENST00000482143 BCL11AQ9H165 835 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms