RNA–Protein interactions for RNA: ENST00000482098.1

LINC00888-203, long intergenic non-protein coding RNA 888, humanhuman

TSL 2

Gene LINC00888, Length 794 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-203ENST00000482098 GK5Q6ZS86 529 aa9.45□□□□□ -0.9
LINC00888-203ENST00000482098 CDC37L1Q7L3B6 337 aa9.45□□□□□ -0.9
LINC00888-203ENST00000482098 FERMT3Q86UX7 667 aa9.45□□□□□ -0.9
LINC00888-203ENST00000482098 RUBCNLQ9H714 662 aa9.45□□□□□ -0.9
LINC00888-203ENST00000482098 GPAMQ9HCL2 828 aa9.45□□□□□ -0.9
LINC00888-203ENST00000482098 TMEM39AQ9NV64 488 aa9.45□□□□□ -0.9
LINC00888-203ENST00000482098 TLR7Q9NYK1 1049 aaKnown RBP9.45□□□□□ -0.9
LINC00888-203ENST00000482098 GPRC5DQ9NZD1 345 aa9.45□□□□□ -0.9
LINC00888-203ENST00000482098 CDHR2Q9BYE9 1310 aa9.45□□□□□ -0.9
LINC00888-203ENST00000482098 SCN7AQ01118 1682 aa9.45□□□□□ -0.9
LINC00888-203ENST00000482098 PAGE1O75459 146 aa9.44□□□□□ -0.9
LINC00888-203ENST00000482098 VIL1P09327 827 aaKnown RBP9.44□□□□□ -0.9
LINC00888-203ENST00000482098 CASP7P55210 303 aa9.44□□□□□ -0.9
LINC00888-203ENST00000482098 EFHC2Q5JST6 749 aa9.44□□□□□ -0.9
LINC00888-203ENST00000482098 GORABQ5T7V8 394 aa9.44□□□□□ -0.9
LINC00888-203ENST00000482098 REC114Q7Z4M0 266 aa9.44□□□□□ -0.9
LINC00888-203ENST00000482098 CTU1Q7Z7A3 348 aaKnown RBP9.44□□□□□ -0.9
LINC00888-203ENST00000482098 RBBP8NLQ8NC74 664 aaPredicted RBP9.44□□□□□ -0.9
LINC00888-203ENST00000482098 ZNF496Q96IT1 587 aaPredicted RBP9.44□□□□□ -0.9
LINC00888-203ENST00000482098 BHLHE41Q9C0J9 482 aaPredicted RBP9.44□□□□□ -0.9
LINC00888-203ENST00000482098 BRMS1Q9HCU9 246 aa9.44□□□□□ -0.9
LINC00888-203ENST00000482098 HOMER2Q9NSB8 354 aa9.44□□□□□ -0.9
LINC00888-203ENST00000482098 PLAAQ9Y263 795 aa9.44□□□□□ -0.9
LINC00888-203ENST00000482098 TRPM7Q96QT4 1865 aa9.44□□□□□ -0.9
LINC00888-203ENST00000482098 A0A0C4DFX4 3053 aa9.43□□□□□ -0.9
LINC00888-203ENST00000482098 LOC102724159A0A0B4J2E5 919 aa9.43□□□□□ -0.9
LINC00888-203ENST00000482098 FAM221AA4D161 298 aa9.43□□□□□ -0.9
LINC00888-203ENST00000482098 KHNYNO15037 678 aaKnown RBP9.43□□□□□ -0.9
LINC00888-203ENST00000482098 GJB6O95452 261 aa9.43□□□□□ -0.9
LINC00888-203ENST00000482098 PPP2R1AP30153 589 aa9.43□□□□□ -0.9
LINC00888-203ENST00000482098 HOXA10P31260 410 aaPredicted RBP9.43□□□□□ -0.9
LINC00888-203ENST00000482098 PWP2Q15269 919 aaKnown RBP9.43□□□□□ -0.9
LINC00888-203ENST00000482098 TKFCQ3LXA3 575 aa9.43□□□□□ -0.9
LINC00888-203ENST00000482098 ODR4Q5SWX8 454 aa9.43□□□□□ -0.9
LINC00888-203ENST00000482098 OLFM4Q6UX06 510 aa9.43□□□□□ -0.9
LINC00888-203ENST00000482098 KRT26Q7Z3Y9 468 aa9.43□□□□□ -0.9
LINC00888-203ENST00000482098 ASAP3Q8TDY4 903 aa9.43□□□□□ -0.9
LINC00888-203ENST00000482098 FMNL2Q96PY5 1086 aa9.43□□□□□ -0.9
LINC00888-203ENST00000482098 ZNF576Q9H609 170 aa9.43□□□□□ -0.9
LINC00888-203ENST00000482098 EFCC1Q9HA90 598 aa9.43□□□□□ -0.9
LINC00888-203ENST00000482098 CYP8B1Q9UNU6 501 aa9.43□□□□□ -0.9
LINC00888-203ENST00000482098 PCDHB5Q9Y5E4 795 aa9.43□□□□□ -0.9
LINC00888-203ENST00000482098 CCDC194A0A1B0GVG4 234 aa9.42□□□□□ -0.9
LINC00888-203ENST00000482098 METTL12A8MUP2 240 aa9.42□□□□□ -0.9
LINC00888-203ENST00000482098 CILPO75339 1184 aa9.42□□□□□ -0.9
LINC00888-203ENST00000482098 ASMTLO95671 621 aa9.42□□□□□ -0.9
LINC00888-203ENST00000482098 F11P03951 625 aa9.42□□□□□ -0.9
LINC00888-203ENST00000482098 A1BGP04217 495 aa9.42□□□□□ -0.9
LINC00888-203ENST00000482098 ACPPP15309 386 aa9.42□□□□□ -0.9
LINC00888-203ENST00000482098 CNGA1P29973 690 aa9.42□□□□□ -0.9
LINC00888-203ENST00000482098 HUNKP57058 714 aa9.42□□□□□ -0.9
LINC00888-203ENST00000482098 SSRP1Q08945 709 aaKnown RBP9.42□□□□□ -0.9
LINC00888-203ENST00000482098 LRRC14Q15048 493 aa9.42□□□□□ -0.9
LINC00888-203ENST00000482098 MTHFSDQ2M296 383 aaKnown RBP9.42□□□□□ -0.9
LINC00888-203ENST00000482098 HABP4Q5JVS0 413 aaKnown RBP9.42□□□□□ -0.9
LINC00888-203ENST00000482098 FIGNL1Q6PIW4 674 aa9.42□□□□□ -0.9
LINC00888-203ENST00000482098 LSRQ86X29 649 aaPredicted RBP9.42□□□□□ -0.9
LINC00888-203ENST00000482098 FMNL3Q8IVF7 1028 aa9.42□□□□□ -0.9
LINC00888-203ENST00000482098 CCAR1Q8IX12 1150 aaKnown RBP9.42□□□□□ -0.9
LINC00888-203ENST00000482098 NIM1KQ8IY84 436 aa9.42□□□□□ -0.9
LINC00888-203ENST00000482098 CEP120Q8N960 986 aa9.42□□□□□ -0.9
LINC00888-203ENST00000482098 TMEM102Q8N9M5 508 aaPredicted RBP9.42□□□□□ -0.9
LINC00888-203ENST00000482098 ST13P5Q8NFI4 369 aaPredicted RBP9.42□□□□□ -0.9
LINC00888-203ENST00000482098 ZNF669Q96BR6 464 aaPredicted RBP9.42□□□□□ -0.9
LINC00888-203ENST00000482098 PLD4Q96BZ4 506 aa9.42□□□□□ -0.9
LINC00888-203ENST00000482098 TNKS2Q9H2K2 1166 aa9.42□□□□□ -0.9
LINC00888-203ENST00000482098 ZFATQ9P243 1243 aa9.42□□□□□ -0.9
LINC00888-203ENST00000482098 PFDN2Q9UHV9 154 aa9.42□□□□□ -0.9
LINC00888-203ENST00000482098 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.42□□□□□ -0.9
LINC00888-203ENST00000482098 PTCH2Q9Y6C5 1203 aa9.42□□□□□ -0.9
LINC00888-203ENST00000482098 UBR2Q8IWV8 1755 aa9.42□□□□□ -0.9
LINC00888-203ENST00000482098 DLG5Q8TDM6 1919 aa9.41□□□□□ -0.9
LINC00888-203ENST00000482098 FAM155AB1AL88 458 aaPredicted RBP9.41□□□□□ -0.9
LINC00888-203ENST00000482098 MAP4K4O95819 1239 aaPredicted RBP9.41□□□□□ -0.9
LINC00888-203ENST00000482098 TEFQ10587 303 aa9.41□□□□□ -0.9
LINC00888-203ENST00000482098 SFSWAPQ12872 951 aaKnown RBP9.41□□□□□ -0.9
LINC00888-203ENST00000482098 RGMBQ6NW40 437 aa9.41□□□□□ -0.9
LINC00888-203ENST00000482098 POTEGQ6S5H5 508 aa9.41□□□□□ -0.9
LINC00888-203ENST00000482098 NXPE3Q969Y0 559 aa9.41□□□□□ -0.9
LINC00888-203ENST00000482098 GLIS2Q9BZE0 524 aaPredicted RBP9.41□□□□□ -0.9
LINC00888-203ENST00000482098 NYXQ9GZU5 481 aa9.41□□□□□ -0.9
LINC00888-203ENST00000482098 RNF186Q9NXI6 227 aa9.41□□□□□ -0.9
LINC00888-203ENST00000482098 NIP7Q9Y221 180 aaKnown RBP eCLIP9.41□□□□□ -0.9
LINC00888-203ENST00000482098 BCORQ6W2J9 1755 aa9.4□□□□□ -0.9
LINC00888-203ENST00000482098 CAPN5O15484 640 aaPredicted RBP9.4□□□□□ -0.9
LINC00888-203ENST00000482098 TRPA1O75762 1119 aa9.4□□□□□ -0.9
LINC00888-203ENST00000482098 FAM157BP0CG42 384 aa9.4□□□□□ -0.9
LINC00888-203ENST00000482098 HOXD8P13378 290 aaPredicted RBP9.4□□□□□ -0.9
LINC00888-203ENST00000482098 SMPD1P17405 629 aa9.4□□□□□ -0.9
LINC00888-203ENST00000482098 NFKB1P19838 968 aa9.4□□□□□ -0.9
LINC00888-203ENST00000482098 CLCQ05315 142 aa9.4□□□□□ -0.9
LINC00888-203ENST00000482098 FAAP100Q0VG06 881 aa9.4□□□□□ -0.9
LINC00888-203ENST00000482098 C6orf118Q5T5N4 469 aa9.4□□□□□ -0.9
LINC00888-203ENST00000482098 C19orf47Q8N9M1 422 aaKnown RBP9.4□□□□□ -0.9
LINC00888-203ENST00000482098 ZSWIM2Q8NEG5 633 aa9.4□□□□□ -0.9
LINC00888-203ENST00000482098 TRERF1Q96PN7 1200 aa9.4□□□□□ -0.9
LINC00888-203ENST00000482098 CRAMP1Q96RY5 1269 aa9.4□□□□□ -0.9
LINC00888-203ENST00000482098 RBSNQ9H1K0 784 aa9.4□□□□□ -0.9
LINC00888-203ENST00000482098 DYRK1BQ9Y463 629 aa9.4□□□□□ -0.9
LINC00888-203ENST00000482098 RIC1Q4ADV7 1423 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms