RNA–Protein interactions for RNA: ENST00000481875.1

GARNL3-217, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-217ENST00000481875 SH3RF1Q7Z6J0 888 aa13.74□□□□□ -0.21
GARNL3-217ENST00000481875 NUP133Q8WUM0 1156 aa13.74□□□□□ -0.21
GARNL3-217ENST00000481875 BADQ92934 168 aa13.74□□□□□ -0.21
GARNL3-217ENST00000481875 DDX11Q96FC9 970 aa13.74□□□□□ -0.21
GARNL3-217ENST00000481875 CEP95Q96GE4 821 aa13.74□□□□□ -0.21
GARNL3-217ENST00000481875 ABHD16BQ9H3Z7 469 aa13.74□□□□□ -0.21
GARNL3-217ENST00000481875 CLIP2Q9UDT6 1046 aa13.74□□□□□ -0.21
GARNL3-217ENST00000481875 FAM184BQ9ULE4 1060 aa13.74□□□□□ -0.21
GARNL3-217ENST00000481875 TTC28Q96AY4 2481 aa13.73□□□□□ -0.21
GARNL3-217ENST00000481875 ELP1O95163 1332 aa13.73□□□□□ -0.21
GARNL3-217ENST00000481875 TMEM265A0A087WTH1 108 aa13.73□□□□□ -0.21
GARNL3-217ENST00000481875 ERC2O15083 957 aa13.73□□□□□ -0.21
GARNL3-217ENST00000481875 PGK1P00558 417 aa13.73□□□□□ -0.21
GARNL3-217ENST00000481875 ACLYP53396 1101 aa13.73□□□□□ -0.21
GARNL3-217ENST00000481875 PDE4BQ07343 736 aa13.73□□□□□ -0.21
GARNL3-217ENST00000481875 C9orf50Q5SZB4 431 aa13.73□□□□□ -0.21
GARNL3-217ENST00000481875 PI4K2BQ8TCG2 481 aa13.73□□□□□ -0.21
GARNL3-217ENST00000481875 FERMT2Q96AC1 680 aa13.73□□□□□ -0.21
GARNL3-217ENST00000481875 GMCL1Q96IK5 515 aa13.73□□□□□ -0.21
GARNL3-217ENST00000481875 NUP88Q99567 741 aaPredicted RBP13.73□□□□□ -0.21
GARNL3-217ENST00000481875 NACAP1Q9BZK3 213 aa13.73□□□□□ -0.21
GARNL3-217ENST00000481875 UPF3AQ9H1J1 476 aaKnown RBP13.73□□□□□ -0.21
GARNL3-217ENST00000481875 SYNRGQ9UMZ2 1314 aa13.72□□□□□ -0.21
GARNL3-217ENST00000481875 M0R2C6 588 aa13.72□□□□□ -0.21
GARNL3-217ENST00000481875 ITGB8P26012 769 aa13.72□□□□□ -0.21
GARNL3-217ENST00000481875 NOVP48745 357 aa13.72□□□□□ -0.21
GARNL3-217ENST00000481875 TDO2P48775 406 aa13.72□□□□□ -0.21
GARNL3-217ENST00000481875 CDK7P50613 346 aa13.72□□□□□ -0.21
GARNL3-217ENST00000481875 FAAP100Q0VG06 881 aa13.72□□□□□ -0.21
GARNL3-217ENST00000481875 ZMYM1Q5SVZ6 1142 aa13.72□□□□□ -0.21
GARNL3-217ENST00000481875 ZNF697Q5TEC3 545 aa13.72□□□□□ -0.21
GARNL3-217ENST00000481875 FGD4Q96M96 766 aa13.72□□□□□ -0.21
GARNL3-217ENST00000481875 SEMA6BQ9H3T3 888 aa13.72□□□□□ -0.21
GARNL3-217ENST00000481875 CIZ1Q9ULV3 898 aaPredicted RBP13.72□□□□□ -0.21
GARNL3-217ENST00000481875 MROH7Q68CQ1 1323 aa13.71□□□□□ -0.21
GARNL3-217ENST00000481875 SLC3A2P08195 630 aaKnown RBP13.71□□□□□ -0.21
GARNL3-217ENST00000481875 FGRP09769 529 aa13.71□□□□□ -0.21
GARNL3-217ENST00000481875 BMP3P12645 472 aa13.71□□□□□ -0.21
GARNL3-217ENST00000481875 GJA9P57773 515 aa13.71□□□□□ -0.21
GARNL3-217ENST00000481875 ACVR2BQ13705 512 aa13.71□□□□□ -0.21
GARNL3-217ENST00000481875 FAM160B2Q86V87 743 aa13.71□□□□□ -0.21
GARNL3-217ENST00000481875 FAM133AQ8N9E0 248 aa13.71□□□□□ -0.21
GARNL3-217ENST00000481875 PCSK9Q8NBP7 692 aaKnown RBP13.71□□□□□ -0.21
GARNL3-217ENST00000481875 CHURC1Q8WUH1 139 aa13.71□□□□□ -0.21
GARNL3-217ENST00000481875 KATNBL1Q9H079 304 aa13.71□□□□□ -0.21
GARNL3-217ENST00000481875 PRDM5Q9NQX1 630 aaPredicted RBP13.71□□□□□ -0.21
GARNL3-217ENST00000481875 NCOR1O75376 2440 aa13.71□□□□□ -0.22
GARNL3-217ENST00000481875 SPTBN5Q9NRC6 3674 aaKnown RBP13.7□□□□□ -0.22
GARNL3-217ENST00000481875 SALL3Q9BXA9 1300 aa13.7□□□□□ -0.22
GARNL3-217ENST00000481875 MUC3AQ02505 3323 aa13.7□□□□□ -0.22
GARNL3-217ENST00000481875 DCDC2CA8MYV0 355 aa13.7□□□□□ -0.22
GARNL3-217ENST00000481875 RAD21O60216 631 aa13.7□□□□□ -0.22
GARNL3-217ENST00000481875 APPP05067 770 aa13.7□□□□□ -0.22
GARNL3-217ENST00000481875 TSPY3P0CV98 308 aa13.7□□□□□ -0.22
GARNL3-217ENST00000481875 TSPY8P0CW00 308 aa13.7□□□□□ -0.22
GARNL3-217ENST00000481875 STAT2P52630 851 aa13.7□□□□□ -0.22
GARNL3-217ENST00000481875 KCNA10Q16322 511 aa13.7□□□□□ -0.22
GARNL3-217ENST00000481875 TKFCQ3LXA3 575 aa13.7□□□□□ -0.22
GARNL3-217ENST00000481875 CPXCR1Q8N123 301 aa13.7□□□□□ -0.22
GARNL3-217ENST00000481875 KIFC2Q96AC6 838 aa13.7□□□□□ -0.22
GARNL3-217ENST00000481875 SEZ6LQ9BYH1 1024 aa13.7□□□□□ -0.22
GARNL3-217ENST00000481875 STARD7Q9NQZ5 370 aa13.7□□□□□ -0.22
GARNL3-217ENST00000481875 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.7□□□□□ -0.22
GARNL3-217ENST00000481875 ANAPC4Q9UJX5 808 aa13.7□□□□□ -0.22
GARNL3-217ENST00000481875 TBX21Q9UL17 535 aa13.7□□□□□ -0.22
GARNL3-217ENST00000481875 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.7□□□□□ -0.22
GARNL3-217ENST00000481875 CHD9Q3L8U1 2897 aa13.69□□□□□ -0.22
GARNL3-217ENST00000481875 CTAGE5O15320 804 aa13.69□□□□□ -0.22
GARNL3-217ENST00000481875 FOXP2O15409 715 aa13.69□□□□□ -0.22
GARNL3-217ENST00000481875 PRDM1O75626 825 aa13.69□□□□□ -0.22
GARNL3-217ENST00000481875 TIMP1P01033 207 aa13.69□□□□□ -0.22
GARNL3-217ENST00000481875 RAG1P15918 1043 aa13.69□□□□□ -0.22
GARNL3-217ENST00000481875 TFAP4Q01664 338 aa13.69□□□□□ -0.22
GARNL3-217ENST00000481875 PPARAQ07869 468 aa13.69□□□□□ -0.22
GARNL3-217ENST00000481875 CCDC144BQ3MJ40 725 aa13.69□□□□□ -0.22
GARNL3-217ENST00000481875 TSHZ3Q63HK5 1081 aa13.69□□□□□ -0.22
GARNL3-217ENST00000481875 SLFN13Q68D06 897 aa13.69□□□□□ -0.22
GARNL3-217ENST00000481875 ANKRD35Q8N283 1001 aa13.69□□□□□ -0.22
GARNL3-217ENST00000481875 OTUD7AQ8TE49 926 aaPredicted RBP13.69□□□□□ -0.22
GARNL3-217ENST00000481875 STAG1Q8WVM7 1258 aa13.69□□□□□ -0.22
GARNL3-217ENST00000481875 GLT1D1Q96MS3 346 aa13.69□□□□□ -0.22
GARNL3-217ENST00000481875 CDX2Q99626 313 aaPredicted RBP13.69□□□□□ -0.22
GARNL3-217ENST00000481875 NAPBQ9H115 298 aa13.69□□□□□ -0.22
GARNL3-217ENST00000481875 SPC25Q9HBM1 224 aa13.69□□□□□ -0.22
GARNL3-217ENST00000481875 RAVER2Q9HCJ3 691 aaKnown RBP13.69□□□□□ -0.22
GARNL3-217ENST00000481875 TMEM39AQ9NV64 488 aa13.69□□□□□ -0.22
GARNL3-217ENST00000481875 CTDP1Q9Y5B0 961 aaPredicted RBP13.69□□□□□ -0.22
GARNL3-217ENST00000481875 ZNF536O15090 1300 aa13.68□□□□□ -0.22
GARNL3-217ENST00000481875 TMEM232C9JQI7 657 aa13.68□□□□□ -0.22
GARNL3-217ENST00000481875 ADCY6O43306 1168 aa13.68□□□□□ -0.22
GARNL3-217ENST00000481875 MX1P20591 662 aa13.68□□□□□ -0.22
GARNL3-217ENST00000481875 EPHB4P54760 987 aa13.68□□□□□ -0.22
GARNL3-217ENST00000481875 FPGSQ05932 587 aa13.68□□□□□ -0.22
GARNL3-217ENST00000481875 ALX1Q15699 326 aa13.68□□□□□ -0.22
GARNL3-217ENST00000481875 RCSD1Q6JBY9 416 aa13.68□□□□□ -0.22
GARNL3-217ENST00000481875 ARMCX2Q7L311 632 aa13.68□□□□□ -0.22
GARNL3-217ENST00000481875 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.68□□□□□ -0.22
GARNL3-217ENST00000481875 SEC62Q99442 399 aaKnown RBP13.68□□□□□ -0.22
GARNL3-217ENST00000481875 TTYH1Q9H313 450 aaPredicted RBP13.68□□□□□ -0.22
GARNL3-217ENST00000481875 ACAD9Q9H845 621 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms